RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 INAFM2P0DMQ5 153 aa9.53□□□□□ -0.88
TRIM13-201ENST00000356017 TRAV13-2A0A0B4J235 113 aa9.52□□□□□ -0.89
TRIM13-201ENST00000356017 LINC00337Q8N6G1 96 aa9.52□□□□□ -0.89
TRIM13-201ENST00000356017 ZNF861PO60384 105 aa9.51□□□□□ -0.89
TRIM13-201ENST00000356017 RPL28P46779 137 aaKnown RBP9.51□□□□□ -0.89
TRIM13-201ENST00000356017 UBE2AP49459 152 aa9.51□□□□□ -0.89
TRIM13-201ENST00000356017 SRRM2Q9UQ35 2752 aaKnown RBP9.5□□□□□ -0.89
TRIM13-201ENST00000356017 TRAV23DV6A0A075B6W5 121 aa9.5□□□□□ -0.89
TRIM13-201ENST00000356017 A6NDN8 102 aa9.5□□□□□ -0.89
TRIM13-201ENST00000356017 TAX1BP3O14907 124 aa9.5□□□□□ -0.89
TRIM13-201ENST00000356017 SPRR1AP35321 89 aa9.5□□□□□ -0.89
TRIM13-201ENST00000356017 FAM19A1Q7Z5A9 133 aa9.5□□□□□ -0.89
TRIM13-201ENST00000356017 FXYD2P54710 66 aa9.49□□□□□ -0.89
TRIM13-201ENST00000356017 CEND1Q8N111 149 aa9.49□□□□□ -0.89
TRIM13-201ENST00000356017 DIRC1Q969H9 104 aa9.49□□□□□ -0.89
TRIM13-201ENST00000356017 TMEM238LA0A1B0GVL6 79 aa9.48□□□□□ -0.89
TRIM13-201ENST00000356017 ETDCA0A1B0GVM5 59 aa9.48□□□□□ -0.89
TRIM13-201ENST00000356017 A6NJY4 79 aa9.48□□□□□ -0.89
TRIM13-201ENST00000356017 ZNF73O43830 326 aaPredicted RBP9.48□□□□□ -0.89
TRIM13-201ENST00000356017 H0Y9J4 135 aa9.47□□□□□ -0.89
TRIM13-201ENST00000356017 KRTAP4-16G5E9R7 235 aaPredicted RBP9.46□□□□□ -0.89
TRIM13-201ENST00000356017 KRTAP13-1Q8IUC0 172 aa9.46□□□□□ -0.89
TRIM13-201ENST00000356017 PRLHP81277 87 aa9.45□□□□□ -0.9
TRIM13-201ENST00000356017 CFC1BP0CG36 223 aa9.43□□□□□ -0.9
TRIM13-201ENST00000356017 CFC1P0CG37 223 aa9.43□□□□□ -0.9
TRIM13-201ENST00000356017 RAB37Q96AX2 223 aa9.43□□□□□ -0.9
TRIM13-201ENST00000356017 A0A0B4J2C4 111 aa9.42□□□□□ -0.9
TRIM13-201ENST00000356017 B5MCH6 92 aa9.42□□□□□ -0.9
TRIM13-201ENST00000356017 K7ERJ3 54 aa9.42□□□□□ -0.9
TRIM13-201ENST00000356017 C6orf99Q4VX62 202 aa9.42□□□□□ -0.9
TRIM13-201ENST00000356017 Q6ZRX8 168 aa9.42□□□□□ -0.9
TRIM13-201ENST00000356017 TRBV7-6A0A0J9YX20 115 aa9.41□□□□□ -0.9
TRIM13-201ENST00000356017 HIGD2AQ9BW72 106 aa9.41□□□□□ -0.9
TRIM13-201ENST00000356017 NHP2Q9NX24 153 aaKnown RBP9.41□□□□□ -0.9
TRIM13-201ENST00000356017 ABCA13Q86UQ4 5058 aa9.4□□□□□ -0.9
TRIM13-201ENST00000356017 RPL13AP40429 203 aaKnown RBP9.4□□□□□ -0.9
TRIM13-201ENST00000356017 SMIM11BQ8TCY0 68 aa9.4□□□□□ -0.9
TRIM13-201ENST00000356017 NAA38Q9BRA0 125 aaKnown RBP9.4□□□□□ -0.9
TRIM13-201ENST00000356017 C9orf118A6NHY6 69 aa9.38□□□□□ -0.91
TRIM13-201ENST00000356017 OXTP01178 125 aa9.38□□□□□ -0.91
TRIM13-201ENST00000356017 COX7BP24311 80 aa9.38□□□□□ -0.91
TRIM13-201ENST00000356017 ELOF1P60002 83 aaKnown RBP9.38□□□□□ -0.91
TRIM13-201ENST00000356017 PRO1854Q9UHT4 67 aa9.38□□□□□ -0.91
TRIM13-201ENST00000356017 A0A1B0GWB2 263 aa9.37□□□□□ -0.91
TRIM13-201ENST00000356017 VAMP3Q15836 100 aa9.37□□□□□ -0.91
TRIM13-201ENST00000356017 PCLOQ9Y6V0 5065 aa9.37□□□□□ -0.91
TRIM13-201ENST00000356017 PKHD1L1Q86WI1 4243 aa9.36□□□□□ -0.91
TRIM13-201ENST00000356017 SMCR5Q8TEV8 140 aa9.36□□□□□ -0.91
TRIM13-201ENST00000356017 DHRS4-AS1Q9P1J3 65 aa9.36□□□□□ -0.91
TRIM13-201ENST00000356017 H3BUT2 72 aa9.35□□□□□ -0.91
TRIM13-201ENST00000356017 Q9BRP9 147 aa9.35□□□□□ -0.91
TRIM13-201ENST00000356017 KRTAP29-1A8MX34 341 aaPredicted RBP9.34□□□□□ -0.91
TRIM13-201ENST00000356017 H7C2G1 150 aa9.34□□□□□ -0.91
TRIM13-201ENST00000356017 ZNF706Q9Y5V0 76 aaPredicted RBP9.34□□□□□ -0.91
TRIM13-201ENST00000356017 LINC01600Q96MT4 127 aa9.34□□□□□ -0.91
TRIM13-201ENST00000356017 Q1RN00 199 aa9.33□□□□□ -0.92
TRIM13-201ENST00000356017 FLG2Q5D862 2391 aaPredicted RBP9.33□□□□□ -0.92
TRIM13-201ENST00000356017 KRTAP1-4P0C5Y4 121 aa9.32□□□□□ -0.92
TRIM13-201ENST00000356017 UBE2V1Q13404 147 aa9.32□□□□□ -0.92
TRIM13-201ENST00000356017 A0A1W2PPM0 123 aa9.31□□□□□ -0.92
TRIM13-201ENST00000356017 SLC25A20O43772 301 aa9.3□□□□□ -0.92
TRIM13-201ENST00000356017 ERC2-IT1O76042 136 aa9.3□□□□□ -0.92
TRIM13-201ENST00000356017 SPRR4Q96PI1 79 aa9.3□□□□□ -0.92
TRIM13-201ENST00000356017 J3QL48 77 aa9.28□□□□□ -0.92
TRIM13-201ENST00000356017 FAM229BQ4G0N7 80 aa9.28□□□□□ -0.92
TRIM13-201ENST00000356017 H0YGX0 51 aa9.27□□□□□ -0.92
TRIM13-201ENST00000356017 CRYGAP11844 174 aa9.27□□□□□ -0.92
TRIM13-201ENST00000356017 MYCBP2O75592 4640 aa9.27□□□□□ -0.93
TRIM13-201ENST00000356017 K7EP34 96 aa9.27□□□□□ -0.93
TRIM13-201ENST00000356017 LINC00575Q6W349 94 aa9.27□□□□□ -0.93
TRIM13-201ENST00000356017 TSPAN13O95857 204 aa9.26□□□□□ -0.93
TRIM13-201ENST00000356017 SNCGO76070 127 aa9.25□□□□□ -0.93
TRIM13-201ENST00000356017 FABP2P12104 132 aa9.25□□□□□ -0.93
TRIM13-201ENST00000356017 GAGE2AQ6NT46 116 aa9.25□□□□□ -0.93
TRIM13-201ENST00000356017 PRR26Q8N8Z3 221 aa9.25□□□□□ -0.93
TRIM13-201ENST00000356017 ANAPC11Q9NYG5 84 aa9.25□□□□□ -0.93
TRIM13-201ENST00000356017 SPCS1Q9Y6A9 102 aa9.25□□□□□ -0.93
TRIM13-201ENST00000356017 hADV29S1A0JD25 119 aa9.24□□□□□ -0.93
TRIM13-201ENST00000356017 COX6CP09669 75 aa9.24□□□□□ -0.93
TRIM13-201ENST00000356017 PSMB2P49721 201 aa9.24□□□□□ -0.93
TRIM13-201ENST00000356017 LINC00483Q53H64 154 aa9.24□□□□□ -0.93
TRIM13-201ENST00000356017 KRTAP10-8P60410 259 aa9.23□□□□□ -0.93
TRIM13-201ENST00000356017 ST20-AS1Q8NBB2 130 aa9.23□□□□□ -0.93
TRIM13-201ENST00000356017 A0A087X002 238 aa9.23□□□□□ -0.93
TRIM13-201ENST00000356017 TRIAP1O43715 76 aa9.23□□□□□ -0.93
TRIM13-201ENST00000356017 LRP1Q07954 4544 aaKnown RBP9.22□□□□□ -0.93
TRIM13-201ENST00000356017 MT1HL1P0DM35 61 aa9.22□□□□□ -0.93
TRIM13-201ENST00000356017 GTF2H5Q6ZYL4 71 aa9.21□□□□□ -0.93
TRIM13-201ENST00000356017 FAT3Q8TDW7 4589 aa9.21□□□□□ -0.94
TRIM13-201ENST00000356017 SPRR1BP22528 89 aa9.2□□□□□ -0.94
TRIM13-201ENST00000356017 TEX49A0A1B0GTD5 131 aa9.2□□□□□ -0.94
TRIM13-201ENST00000356017 A0A1B0GX51 115 aa9.2□□□□□ -0.94
TRIM13-201ENST00000356017 TYMSOSQ8TAI1 123 aa9.2□□□□□ -0.94
TRIM13-201ENST00000356017 DEFB105AQ8NG35 78 aa9.19□□□□□ -0.94
TRIM13-201ENST00000356017 IGLV5-48A0A075B6I7 105 aa9.18□□□□□ -0.94
TRIM13-201ENST00000356017 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.18□□□□□ -0.94
TRIM13-201ENST00000356017 Q6ZQY7 126 aa9.18□□□□□ -0.94
TRIM13-201ENST00000356017 SCGB1C2P0DMR2 95 aa9.17□□□□□ -0.94
TRIM13-201ENST00000356017 KRTAP13-2Q52LG2 175 aa9.17□□□□□ -0.94
TRIM13-201ENST00000356017 FAM218AQ96MZ4 157 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms