RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 Q6ZVQ6 151 aa14.12□□□□□ -0.15
LIMS2-202ENST00000355119 PRYO14603 147 aa14.11□□□□□ -0.15
LIMS2-202ENST00000355119 FAM19A1Q7Z5A9 133 aa14.1□□□□□ -0.15
LIMS2-202ENST00000355119 SERP2Q8N6R1 65 aa14.09□□□□□ -0.15
LIMS2-202ENST00000355119 LOC107984640A0A0U1RRK4 108 aa14.08□□□□□ -0.15
LIMS2-202ENST00000355119 IGLV1-50A0A075B6I6 118 aa14.08□□□□□ -0.16
LIMS2-202ENST00000355119 LINC01547P58512 204 aaPredicted RBP14.08□□□□□ -0.16
LIMS2-202ENST00000355119 DHRS4-AS1Q9P1J3 65 aa14.08□□□□□ -0.16
LIMS2-202ENST00000355119 FAM168BA1KXE4 195 aa14.07□□□□□ -0.16
LIMS2-202ENST00000355119 CRYGAP11844 174 aa14.06□□□□□ -0.16
LIMS2-202ENST00000355119 HAMPP81172 84 aa14.06□□□□□ -0.16
LIMS2-202ENST00000355119 CXCL6P80162 114 aa14.05□□□□□ -0.16
LIMS2-202ENST00000355119 SPRR1AP35321 89 aa14.05□□□□□ -0.16
LIMS2-202ENST00000355119 Q6ZRX8 168 aa14.05□□□□□ -0.16
LIMS2-202ENST00000355119 RPL37AP8A6NKH3 93 aa14.04□□□□□ -0.16
LIMS2-202ENST00000355119 KRTAP4-16G5E9R7 235 aaPredicted RBP14.03□□□□□ -0.16
LIMS2-202ENST00000355119 ETDCA0A1B0GVM5 59 aa14.03□□□□□ -0.16
LIMS2-202ENST00000355119 KRTAP7-1Q8IUC3 87 aa14.02□□□□□ -0.16
LIMS2-202ENST00000355119 MRPL55Q7Z7F7 128 aaKnown RBP14.01□□□□□ -0.17
LIMS2-202ENST00000355119 Q8N377 158 aa14.01□□□□□ -0.17
LIMS2-202ENST00000355119 DEFB105AQ8NG35 78 aa14□□□□□ -0.17
LIMS2-202ENST00000355119 HUWE1Q7Z6Z7 4374 aaKnown RBP14□□□□□ -0.17
LIMS2-202ENST00000355119 FAM19A5Q7Z5A7 132 aaPredicted RBP14□□□□□ -0.17
LIMS2-202ENST00000355119 BCE1O60756 84 aa13.98□□□□□ -0.17
LIMS2-202ENST00000355119 Q9BRP9 147 aa13.98□□□□□ -0.17
LIMS2-202ENST00000355119 NOTCH1P46531 2555 aa13.96□□□□□ -0.17
LIMS2-202ENST00000355119 UBE2DNLQ8IWF7 75 aa13.96□□□□□ -0.17
LIMS2-202ENST00000355119 IGLV5-48A0A075B6I7 105 aa13.95□□□□□ -0.18
LIMS2-202ENST00000355119 KRTAP1-5Q9BYS1 174 aa13.95□□□□□ -0.18
LIMS2-202ENST00000355119 DNAH1Q9P2D7 4330 aa13.95□□□□□ -0.18
LIMS2-202ENST00000355119 APLNQ9ULZ1 77 aa13.94□□□□□ -0.18
LIMS2-202ENST00000355119 CNBPP62633 177 aaKnown RBP13.93□□□□□ -0.18
LIMS2-202ENST00000355119 PSCAO43653 123 aa13.92□□□□□ -0.18
LIMS2-202ENST00000355119 REG3GQ6UW15 175 aa13.91□□□□□ -0.18
LIMS2-202ENST00000355119 COL6A5A8TX70 2615 aa13.9□□□□□ -0.18
LIMS2-202ENST00000355119 C16orf90A8MZG2 172 aa13.9□□□□□ -0.18
LIMS2-202ENST00000355119 SMIM20Q8N5G0 67 aa13.89□□□□□ -0.19
LIMS2-202ENST00000355119 B9D2Q9BPU9 175 aa13.89□□□□□ -0.19
LIMS2-202ENST00000355119 UBE2BP63146 152 aa13.88□□□□□ -0.19
LIMS2-202ENST00000355119 C14orf177Q52M58 125 aa13.88□□□□□ -0.19
LIMS2-202ENST00000355119 SCXQ7RTU7 201 aa13.88□□□□□ -0.19
LIMS2-202ENST00000355119 A0A1B0GW54 56 aa13.88□□□□□ -0.19
LIMS2-202ENST00000355119 NREPQ16612 68 aa13.88□□□□□ -0.19
LIMS2-202ENST00000355119 ST20-AS1Q8NBB2 130 aa13.88□□□□□ -0.19
LIMS2-202ENST00000355119 A0A096LNI7 61 aa13.87□□□□□ -0.19
LIMS2-202ENST00000355119 TNP2Q05952 138 aa13.86□□□□□ -0.19
LIMS2-202ENST00000355119 TRAV7A0A075B6U4 112 aa13.86□□□□□ -0.19
LIMS2-202ENST00000355119 FUSP35637 526 aaKnown RBP eCLIP13.85□□□□□ -0.19
LIMS2-202ENST00000355119 CYSTM1Q9H1C7 97 aa13.85□□□□□ -0.19
LIMS2-202ENST00000355119 ERC2-IT1O76042 136 aa13.85□□□□□ -0.19
LIMS2-202ENST00000355119 NBEAL1Q6ZS30 2694 aa13.83□□□□□ -0.2
LIMS2-202ENST00000355119 IGKV2-24A0A0C4DH68 120 aa13.82□□□□□ -0.2
LIMS2-202ENST00000355119 C3orf84H3BNL1 204 aa13.82□□□□□ -0.2
LIMS2-202ENST00000355119 TMEM258P61165 79 aa13.82□□□□□ -0.2
LIMS2-202ENST00000355119 C1orf137Q5JT78 98 aa13.82□□□□□ -0.2
LIMS2-202ENST00000355119 A0A1W2PNN7 141 aa13.8□□□□□ -0.2
LIMS2-202ENST00000355119 MDFIQ99750 246 aa13.8□□□□□ -0.2
LIMS2-202ENST00000355119 A0A1W2PNM2 257 aa13.8□□□□□ -0.2
LIMS2-202ENST00000355119 BPY2O14599 106 aa13.79□□□□□ -0.2
LIMS2-202ENST00000355119 Q8NBF4 154 aa13.78□□□□□ -0.2
LIMS2-202ENST00000355119 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.77□□□□□ -0.21
LIMS2-202ENST00000355119 PKIGQ9Y2B9 76 aa13.76□□□□□ -0.21
LIMS2-202ENST00000355119 IGKV4-1P06312 121 aa13.76□□□□□ -0.21
LIMS2-202ENST00000355119 NUPR2A6NF83 97 aa13.75□□□□□ -0.21
LIMS2-202ENST00000355119 C20orf197Q8N268 126 aa13.75□□□□□ -0.21
LIMS2-202ENST00000355119 SMIM29Q86T20 159 aa13.74□□□□□ -0.21
LIMS2-202ENST00000355119 SPRR4Q96PI1 79 aa13.74□□□□□ -0.21
LIMS2-202ENST00000355119 F8WEM9 126 aa13.73□□□□□ -0.21
LIMS2-202ENST00000355119 NBDYA0A0U1RRE5 68 aa13.73□□□□□ -0.21
LIMS2-202ENST00000355119 Q8N9L7 120 aa13.71□□□□□ -0.21
LIMS2-202ENST00000355119 LRCOL1A6NCL2 159 aa13.7□□□□□ -0.22
LIMS2-202ENST00000355119 PRLHP81277 87 aa13.7□□□□□ -0.22
LIMS2-202ENST00000355119 C9orf163Q8N9P6 203 aa13.7□□□□□ -0.22
LIMS2-202ENST00000355119 J3KT08 172 aa13.69□□□□□ -0.22
LIMS2-202ENST00000355119 DNAH9Q9NYC9 4486 aa13.69□□□□□ -0.22
LIMS2-202ENST00000355119 CHTF8P0CG12 524 aa13.68□□□□□ -0.22
LIMS2-202ENST00000355119 LINC00476Q8WZB0 136 aa13.68□□□□□ -0.22
LIMS2-202ENST00000355119 MGAM2Q2M2H8 2515 aa13.68□□□□□ -0.22
LIMS2-202ENST00000355119 RPS28P62857 69 aaKnown RBP13.68□□□□□ -0.22
LIMS2-202ENST00000355119 PHF5AQ7RTV0 110 aaKnown RBP13.67□□□□□ -0.22
LIMS2-202ENST00000355119 HIGD2AQ9BW72 106 aa13.66□□□□□ -0.22
LIMS2-202ENST00000355119 DYNC2H1Q8NCM8 4307 aaKnown RBP13.65□□□□□ -0.22
LIMS2-202ENST00000355119 KLKP1Q107X0 134 aa13.65□□□□□ -0.22
LIMS2-202ENST00000355119 H0Y9J4 135 aa13.64□□□□□ -0.23
LIMS2-202ENST00000355119 LINC00474Q9P2X8 69 aa13.64□□□□□ -0.23
LIMS2-202ENST00000355119 IGLV8-61A0A075B6I0 122 aa13.64□□□□□ -0.23
LIMS2-202ENST00000355119 Q6ZRN7 208 aaPredicted RBP13.64□□□□□ -0.23
LIMS2-202ENST00000355119 DPH3Q96FX2 82 aa13.63□□□□□ -0.23
LIMS2-202ENST00000355119 IGFL1Q6UW32 110 aa13.61□□□□□ -0.23
LIMS2-202ENST00000355119 KRTAP11-1Q8IUC1 163 aa13.61□□□□□ -0.23
LIMS2-202ENST00000355119 UBE2AP49459 152 aa13.59□□□□□ -0.23
LIMS2-202ENST00000355119 COL7A1Q02388 2944 aa13.59□□□□□ -0.23
LIMS2-202ENST00000355119 STAB2Q8WWQ8 2551 aa13.59□□□□□ -0.23
LIMS2-202ENST00000355119 EPM2AB3EWF7 344 aa13.59□□□□□ -0.23
LIMS2-202ENST00000355119 H7BZZ5 65 aa13.57□□□□□ -0.24
LIMS2-202ENST00000355119 SPRR1BP22528 89 aa13.57□□□□□ -0.24
LIMS2-202ENST00000355119 OCR1Q9BZK8 76 aa13.57□□□□□ -0.24
LIMS2-202ENST00000355119 SNURFQ9Y675 71 aa13.57□□□□□ -0.24
LIMS2-202ENST00000355119 DNAH10Q8IVF4 4471 aa13.56□□□□□ -0.24
LIMS2-202ENST00000355119 FAM236DA0A1B0GTK5 79 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms