RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 ZNF861PO60384 105 aa9.87□□□□□ -0.83
CUL3-202ENST00000344951 CAMK2N1Q7Z7J9 78 aa9.87□□□□□ -0.83
CUL3-202ENST00000344951 KLKP1Q107X0 134 aa9.86□□□□□ -0.83
CUL3-202ENST00000344951 JMJD1CQ15652 2540 aa9.85□□□□□ -0.83
CUL3-202ENST00000344951 WIPF1O43516 503 aa9.85□□□□□ -0.83
CUL3-202ENST00000344951 LINC00528Q8N1L1 170 aa9.85□□□□□ -0.83
CUL3-202ENST00000344951 TLN1Q9Y490 2541 aaKnown RBP9.85□□□□□ -0.83
CUL3-202ENST00000344951 H7BZZ5 65 aa9.85□□□□□ -0.83
CUL3-202ENST00000344951 NCOR2Q9Y618 2525 aa9.84□□□□□ -0.83
CUL3-202ENST00000344951 A0A087WTM6 91 aa9.84□□□□□ -0.83
CUL3-202ENST00000344951 KCNQ1DNQ9H478 68 aa9.84□□□□□ -0.83
CUL3-202ENST00000344951 CYP4F30PQ9H0H9 118 aa9.82□□□□□ -0.84
CUL3-202ENST00000344951 CENPFP49454 3210 aa9.81□□□□□ -0.84
CUL3-202ENST00000344951 Q6ZSA8 131 aa9.81□□□□□ -0.84
CUL3-202ENST00000344951 FAM104AQ969W3 186 aa9.8□□□□□ -0.84
CUL3-202ENST00000344951 CASC10Q5T4H9 136 aa9.79□□□□□ -0.84
CUL3-202ENST00000344951 Q8N377 158 aa9.79□□□□□ -0.84
CUL3-202ENST00000344951 FN1P02751 2386 aaKnown RBP9.79□□□□□ -0.84
CUL3-202ENST00000344951 PSORS1C2Q9UIG4 136 aa9.79□□□□□ -0.84
CUL3-202ENST00000344951 IGLV7-43P04211 117 aa9.79□□□□□ -0.84
CUL3-202ENST00000344951 F8P00451 2351 aa9.76□□□□□ -0.85
CUL3-202ENST00000344951 PRR26Q8N8Z3 221 aa9.75□□□□□ -0.85
CUL3-202ENST00000344951 LINC00483Q53H64 154 aa9.73□□□□□ -0.85
CUL3-202ENST00000344951 ZFYVE26Q68DK2 2539 aa9.73□□□□□ -0.85
CUL3-202ENST00000344951 CD164Q04900 197 aa9.72□□□□□ -0.85
CUL3-202ENST00000344951 KRTAP10-3P60369 221 aa9.72□□□□□ -0.85
CUL3-202ENST00000344951 GIG44P09565 113 aaPredicted RBP9.72□□□□□ -0.85
CUL3-202ENST00000344951 PRR34Q9NV39 138 aa9.72□□□□□ -0.85
CUL3-202ENST00000344951 TLX1NBP0CAT3 122 aa9.7□□□□□ -0.86
CUL3-202ENST00000344951 PLA2G2DQ9UNK4 145 aa9.69□□□□□ -0.86
CUL3-202ENST00000344951 TLN2Q9Y4G6 2542 aa9.69□□□□□ -0.86
CUL3-202ENST00000344951 ABCA12Q86UK0 2595 aa9.67□□□□□ -0.86
CUL3-202ENST00000344951 IGLV7-46A0A075B6I9 117 aa9.67□□□□□ -0.86
CUL3-202ENST00000344951 KTN1-AS1Q86SY8 53 aa9.67□□□□□ -0.86
CUL3-202ENST00000344951 LCA10Q71F78 164 aa9.66□□□□□ -0.86
CUL3-202ENST00000344951 SPRR4Q96PI1 79 aa9.65□□□□□ -0.86
CUL3-202ENST00000344951 C9orf163Q8N9P6 203 aa9.65□□□□□ -0.87
CUL3-202ENST00000344951 A0A1W2PNM2 257 aa9.64□□□□□ -0.87
CUL3-202ENST00000344951 LINC00612Q8N6U2 182 aa9.64□□□□□ -0.87
CUL3-202ENST00000344951 C19orf73Q9NVV2 129 aa9.63□□□□□ -0.87
CUL3-202ENST00000344951 USP9XQ93008 2570 aaPredicted RBP9.62□□□□□ -0.87
CUL3-202ENST00000344951 TNP2Q05952 138 aa9.6□□□□□ -0.87
CUL3-202ENST00000344951 Q1T7F1 81 aa9.6□□□□□ -0.87
CUL3-202ENST00000344951 ACANP16112 2415 aa9.59□□□□□ -0.87
CUL3-202ENST00000344951 SETD2Q9BYW2 2564 aaPredicted RBP9.56□□□□□ -0.88
CUL3-202ENST00000344951 A0A1B0GU33 70 aa9.54□□□□□ -0.88
CUL3-202ENST00000344951 SPANXA2-OT1Q8N9U9 137 aa9.54□□□□□ -0.88
CUL3-202ENST00000344951 A0A096LNT2 108 aa9.53□□□□□ -0.88
CUL3-202ENST00000344951 S4R3F8 94 aa9.53□□□□□ -0.88
CUL3-202ENST00000344951 OCR1Q9BZK8 76 aa9.52□□□□□ -0.89
CUL3-202ENST00000344951 UTRNP46939 3433 aa9.52□□□□□ -0.89
CUL3-202ENST00000344951 ZNF462Q96JM2 2506 aa9.5□□□□□ -0.89
CUL3-202ENST00000344951 ANKRD11Q6UB99 2663 aaPredicted RBP9.5□□□□□ -0.89
CUL3-202ENST00000344951 PKD1L2Q7Z442 2459 aa9.48□□□□□ -0.89
CUL3-202ENST00000344951 USP9YO00507 2555 aaPredicted RBP9.47□□□□□ -0.89
CUL3-202ENST00000344951 CEP295Q9C0D2 2601 aa9.46□□□□□ -0.89
CUL3-202ENST00000344951 DNAH12Q6ZR08 3092 aa9.46□□□□□ -0.89
CUL3-202ENST00000344951 PRAC1Q96KF2 57 aa9.46□□□□□ -0.89
CUL3-202ENST00000344951 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.46□□□□□ -0.89
CUL3-202ENST00000344951 FAM229BQ4G0N7 80 aa9.46□□□□□ -0.9
CUL3-202ENST00000344951 CYSTM1Q9H1C7 97 aa9.46□□□□□ -0.9
CUL3-202ENST00000344951 HRES1P13985 223 aa9.45□□□□□ -0.9
CUL3-202ENST00000344951 PIEZO1Q92508 2521 aa9.45□□□□□ -0.9
CUL3-202ENST00000344951 Q5XG85 94 aa9.44□□□□□ -0.9
CUL3-202ENST00000344951 ANKRD17O75179 2603 aaKnown RBP9.42□□□□□ -0.9
CUL3-202ENST00000344951 SPINK7P58062 85 aa9.41□□□□□ -0.9
CUL3-202ENST00000344951 CSAG1Q6PB30 78 aa9.4□□□□□ -0.9
CUL3-202ENST00000344951 R4GN34 69 aa9.4□□□□□ -0.91
CUL3-202ENST00000344951 CNBPP62633 177 aaKnown RBP9.39□□□□□ -0.91
CUL3-202ENST00000344951 CR1P17927 2039 aa9.38□□□□□ -0.91
CUL3-202ENST00000344951 POLQO75417 2590 aa9.37□□□□□ -0.91
CUL3-202ENST00000344951 Q8N9P0 234 aaPredicted RBP9.37□□□□□ -0.91
CUL3-202ENST00000344951 Q5VSD8 79 aa9.36□□□□□ -0.91
CUL3-202ENST00000344951 FP248Q71RG6 208 aaPredicted RBP9.34□□□□□ -0.91
CUL3-202ENST00000344951 A0A0A0MQY5 61 aa9.33□□□□□ -0.92
CUL3-202ENST00000344951 H1FX-AS1Q4G0G2 97 aa9.33□□□□□ -0.92
CUL3-202ENST00000344951 Q75L30 129 aa9.33□□□□□ -0.92
CUL3-202ENST00000344951 Q8NDZ9 215 aa9.33□□□□□ -0.92
CUL3-202ENST00000344951 H3BS24 57 aa9.33□□□□□ -0.92
CUL3-202ENST00000344951 MTORP42345 2549 aa9.32□□□□□ -0.92
CUL3-202ENST00000344951 ZCCHC13Q8WW36 166 aaKnown RBP9.31□□□□□ -0.92
CUL3-202ENST00000344951 KRTAP1-3Q8IUG1 177 aa9.29□□□□□ -0.92
CUL3-202ENST00000344951 DMAC1Q96GE9 116 aa9.29□□□□□ -0.92
CUL3-202ENST00000344951 CHD8Q9HCK8 2581 aa9.27□□□□□ -0.93
CUL3-202ENST00000344951 BPTFQ12830 3046 aa9.26□□□□□ -0.93
CUL3-202ENST00000344951 SPTBN4Q9H254 2564 aa9.26□□□□□ -0.93
CUL3-202ENST00000344951 M0QZ58 72 aa9.26□□□□□ -0.93
CUL3-202ENST00000344951 PLAC4Q8WY50 150 aa9.26□□□□□ -0.93
CUL3-202ENST00000344951 MMP24-AS1A0A0U1RRL7 71 aa9.23□□□□□ -0.93
CUL3-202ENST00000344951 LINC01558Q9Y6Z2 57 aa9.22□□□□□ -0.93
CUL3-202ENST00000344951 KRTAP1-1Q07627 177 aa9.22□□□□□ -0.93
CUL3-202ENST00000344951 OXTP01178 125 aa9.21□□□□□ -0.93
CUL3-202ENST00000344951 Q5VV11 94 aa9.21□□□□□ -0.94
CUL3-202ENST00000344951 Q5W150 140 aa9.18□□□□□ -0.94
CUL3-202ENST00000344951 SEC61BP60468 96 aaKnown RBP9.16□□□□□ -0.94
CUL3-202ENST00000344951 ADM2Q7Z4H4 148 aa9.15□□□□□ -0.95
CUL3-202ENST00000344951 CEP350Q5VT06 3117 aa9.14□□□□□ -0.95
CUL3-202ENST00000344951 PRRC2CQ9Y520 2896 aaKnown RBP9.14□□□□□ -0.95
CUL3-202ENST00000344951 SPATA8Q6RVD6 105 aa9.14□□□□□ -0.95
CUL3-202ENST00000344951 C5orf42Q9H799 3197 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms