RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 LINC00313P59037 77 aa4.33□□□□□ -1.72
VCAN-203ENST00000343200 GOLGB1Q14789 3259 aaKnown RBP4.33□□□□□ -1.72
VCAN-203ENST00000343200 Q6ZRX8 168 aa4.32□□□□□ -1.72
VCAN-203ENST00000343200 CSNK1G2-AS1Q8NCQ2 148 aa4.32□□□□□ -1.72
VCAN-203ENST00000343200 IGLV5-45A0A087WSX0 123 aa4.32□□□□□ -1.72
VCAN-203ENST00000343200 CDSNQ15517 529 aa4.32□□□□□ -1.72
VCAN-203ENST00000343200 U3KQA8 63 aa4.32□□□□□ -1.72
VCAN-203ENST00000343200 NUPR2A6NF83 97 aa4.32□□□□□ -1.72
VCAN-203ENST00000343200 FAM229AH3BQW9 127 aa4.32□□□□□ -1.72
VCAN-203ENST00000343200 C6orf223Q8N319 242 aa4.32□□□□□ -1.72
VCAN-203ENST00000343200 DMAC1Q96GE9 116 aa4.32□□□□□ -1.72
VCAN-203ENST00000343200 CRYBG3Q68DQ2 2970 aa4.31□□□□□ -1.72
VCAN-203ENST00000343200 PLA2G5P39877 138 aa4.31□□□□□ -1.72
VCAN-203ENST00000343200 LINC01556Q5JQF7 62 aa4.31□□□□□ -1.72
VCAN-203ENST00000343200 LY6G6DO95868 133 aa4.31□□□□□ -1.72
VCAN-203ENST00000343200 Q75L30 129 aa4.31□□□□□ -1.72
VCAN-203ENST00000343200 APLNQ9ULZ1 77 aa4.31□□□□□ -1.72
VCAN-203ENST00000343200 VPS13AQ96RL7 3174 aa4.31□□□□□ -1.72
VCAN-203ENST00000343200 C8orf17Q9NRJ1 99 aa4.31□□□□□ -1.72
VCAN-203ENST00000343200 C11orf71Q6IPW1 123 aa4.3□□□□□ -1.72
VCAN-203ENST00000343200 CRIP3Q6Q6R5 217 aa4.3□□□□□ -1.72
VCAN-203ENST00000343200 C9orf129Q5T035 196 aaKnown RBP4.29□□□□□ -1.72
VCAN-203ENST00000343200 IGLV4-60A0A075B6I1 120 aa4.29□□□□□ -1.72
VCAN-203ENST00000343200 K7EQZ3 153 aa4.29□□□□□ -1.72
VCAN-203ENST00000343200 Q6YL49 198 aa4.29□□□□□ -1.72
VCAN-203ENST00000343200 PRO3102Q9H379 93 aa4.29□□□□□ -1.72
VCAN-203ENST00000343200 FRYQ5TBA9 3013 aa4.28□□□□□ -1.72
VCAN-203ENST00000343200 IGLV5-52A0A0A0MRZ9 124 aa4.28□□□□□ -1.72
VCAN-203ENST00000343200 LINC00483Q53H64 154 aa4.28□□□□□ -1.72
VCAN-203ENST00000343200 LINC00476Q8WZB0 136 aa4.28□□□□□ -1.72
VCAN-203ENST00000343200 C1orf229Q6ZS94 237 aaPredicted RBP4.28□□□□□ -1.72
VCAN-203ENST00000343200 CHTF8P0CG12 524 aa4.28□□□□□ -1.72
VCAN-203ENST00000343200 CAMK2N1Q7Z7J9 78 aa4.28□□□□□ -1.72
VCAN-203ENST00000343200 IGFL2Q6UWQ7 119 aa4.28□□□□□ -1.73
VCAN-203ENST00000343200 Q6ZRU5 148 aa4.28□□□□□ -1.73
VCAN-203ENST00000343200 IGLV6-57P01721 117 aa4.27□□□□□ -1.73
VCAN-203ENST00000343200 IGLV1-40P01703 118 aa4.27□□□□□ -1.73
VCAN-203ENST00000343200 KIF25-AS1Q9Y6Z4 181 aa4.26□□□□□ -1.73
VCAN-203ENST00000343200 IGHV3OR16-9A0A0B4J2B5 98 aa4.26□□□□□ -1.73
VCAN-203ENST00000343200 FBXL19-AS1Q494R0 122 aa4.26□□□□□ -1.73
VCAN-203ENST00000343200 C1orf134Q5TEV5 83 aa4.26□□□□□ -1.73
VCAN-203ENST00000343200 LAMA1P25391 3075 aa4.24□□□□□ -1.73
VCAN-203ENST00000343200 TENM3Q9P273 2699 aa4.24□□□□□ -1.73
VCAN-203ENST00000343200 SPACA4Q8TDM5 124 aa4.23□□□□□ -1.73
VCAN-203ENST00000343200 EIF4EBP3O60516 100 aaPredicted RBP4.23□□□□□ -1.73
VCAN-203ENST00000343200 C22orf24Q9Y442 160 aa4.23□□□□□ -1.73
VCAN-203ENST00000343200 ASH1LQ9NR48 2969 aaKnown RBP4.22□□□□□ -1.73
VCAN-203ENST00000343200 LMO4P61968 165 aa4.22□□□□□ -1.73
VCAN-203ENST00000343200 RPL37AP61513 92 aaKnown RBP4.22□□□□□ -1.73
VCAN-203ENST00000343200 Q6ZSN1 163 aa4.21□□□□□ -1.73
VCAN-203ENST00000343200 MRPL34Q9BQ48 92 aaKnown RBP4.21□□□□□ -1.73
VCAN-203ENST00000343200 TNRC18O15417 2968 aaPredicted RBP4.21□□□□□ -1.74
VCAN-203ENST00000343200 TENM1Q9UKZ4 2725 aa4.21□□□□□ -1.74
VCAN-203ENST00000343200 J3QKU1 62 aa4.21□□□□□ -1.74
VCAN-203ENST00000343200 BRI3O95415 125 aa4.21□□□□□ -1.74
VCAN-203ENST00000343200 ADORA2A-AS1P86434 159 aa4.21□□□□□ -1.74
VCAN-203ENST00000343200 Q5XG85 94 aa4.21□□□□□ -1.74
VCAN-203ENST00000343200 DCHS2Q6V1P9 2916 aa4.2□□□□□ -1.74
VCAN-203ENST00000343200 TGP01266 2768 aa4.2□□□□□ -1.74
VCAN-203ENST00000343200 M0R2N4 97 aa4.2□□□□□ -1.74
VCAN-203ENST00000343200 DMXL2Q8TDJ6 3036 aa4.2□□□□□ -1.74
VCAN-203ENST00000343200 PLA2G2CQ5R387 149 aa4.2□□□□□ -1.74
VCAN-203ENST00000343200 KRTAP16-1A8MUX0 517 aa4.2□□□□□ -1.74
VCAN-203ENST00000343200 FAM104AQ969W3 186 aa4.2□□□□□ -1.74
VCAN-203ENST00000343200 LINC00167Q96N53 147 aa4.19□□□□□ -1.74
VCAN-203ENST00000343200 LITAFQ99732 161 aa4.19□□□□□ -1.74
VCAN-203ENST00000343200 C16orf90A8MZG2 172 aa4.19□□□□□ -1.74
VCAN-203ENST00000343200 Q96NJ1 140 aa4.19□□□□□ -1.74
VCAN-203ENST00000343200 COL12A1Q99715 3063 aa4.19□□□□□ -1.74
VCAN-203ENST00000343200 REV3LO60673 3130 aa4.19□□□□□ -1.74
VCAN-203ENST00000343200 A0A1B0GVX0 72 aa4.18□□□□□ -1.74
VCAN-203ENST00000343200 Q6ZRP5 223 aa4.18□□□□□ -1.74
VCAN-203ENST00000343200 C10orf99Q6UWK7 81 aa4.18□□□□□ -1.74
VCAN-203ENST00000343200 GVQW2A0A096LPI5 108 aaPredicted RBP4.18□□□□□ -1.74
VCAN-203ENST00000343200 ZANQ9Y493 2812 aa4.18□□□□□ -1.74
VCAN-203ENST00000343200 RANBP2P49792 3224 aaKnown RBP4.18□□□□□ -1.74
VCAN-203ENST00000343200 ASB16-AS1Q495Z4 193 aa4.18□□□□□ -1.74
VCAN-203ENST00000343200 CSAG1Q6PB30 78 aa4.18□□□□□ -1.74
VCAN-203ENST00000343200 ST20-AS1Q8NBB2 130 aa4.18□□□□□ -1.74
VCAN-203ENST00000343200 ZFHX3Q15911 3703 aa4.17□□□□□ -1.74
VCAN-203ENST00000343200 ODF3L2Q3SX64 289 aa4.17□□□□□ -1.74
VCAN-203ENST00000343200 A0A0D9SG42 100 aa4.17□□□□□ -1.74
VCAN-203ENST00000343200 XIRP2A4UGR9 3374 aa4.17□□□□□ -1.74
VCAN-203ENST00000343200 PLA2G2DQ9UNK4 145 aa4.17□□□□□ -1.74
VCAN-203ENST00000343200 TLX1NBP0CAT3 122 aa4.17□□□□□ -1.74
VCAN-203ENST00000343200 OCR1Q9BZK8 76 aa4.16□□□□□ -1.74
VCAN-203ENST00000343200 LY6G6CO95867 125 aa4.16□□□□□ -1.74
VCAN-203ENST00000343200 IGLV1-51P01701 117 aa4.16□□□□□ -1.74
VCAN-203ENST00000343200 IGLV7-43P04211 117 aa4.16□□□□□ -1.74
VCAN-203ENST00000343200 LINC01558Q9Y6Z2 57 aa4.15□□□□□ -1.75
VCAN-203ENST00000343200 C18orf65Q6ZTR6 163 aa4.15□□□□□ -1.75
VCAN-203ENST00000343200 ZZEF1O43149 2961 aa4.15□□□□□ -1.75
VCAN-203ENST00000343200 OBSCN-AS1Q96MR7 158 aa4.14□□□□□ -1.75
VCAN-203ENST00000343200 KCNQ1DNQ9H478 68 aa4.14□□□□□ -1.75
VCAN-203ENST00000343200 FREM2Q5SZK8 3169 aa4.14□□□□□ -1.75
VCAN-203ENST00000343200 PRUNE2Q8WUY3 3088 aa4.14□□□□□ -1.75
VCAN-203ENST00000343200 FAM229BQ4G0N7 80 aa4.13□□□□□ -1.75
VCAN-203ENST00000343200 IGFL1Q6UW32 110 aa4.13□□□□□ -1.75
VCAN-203ENST00000343200 LINC00588Q9Y4M8 146 aa4.13□□□□□ -1.75
VCAN-203ENST00000343200 A0A1B0GU33 70 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms