RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 GAGE10A6NGK3 116 aa7.94□□□□□ -1.14
HLA-DQA1-201ENST00000343139 RPL37AP8A6NKH3 93 aa7.94□□□□□ -1.14
HLA-DQA1-201ENST00000343139 M0R378 163 aa7.94□□□□□ -1.14
HLA-DQA1-201ENST00000343139 GTF2H5Q6ZYL4 71 aa7.94□□□□□ -1.14
HLA-DQA1-201ENST00000343139 TIMM17BO60830 172 aa7.93□□□□□ -1.14
HLA-DQA1-201ENST00000343139 A0A1W2PPM0 123 aa7.93□□□□□ -1.14
HLA-DQA1-201ENST00000343139 H3BUT2 72 aa7.93□□□□□ -1.14
HLA-DQA1-201ENST00000343139 RPL28P46779 137 aaKnown RBP7.93□□□□□ -1.14
HLA-DQA1-201ENST00000343139 TNXBP22105 4242 aa7.92□□□□□ -1.14
HLA-DQA1-201ENST00000343139 IGKV2-28A0A075B6P5 120 aa7.92□□□□□ -1.14
HLA-DQA1-201ENST00000343139 K7EP34 96 aa7.92□□□□□ -1.14
HLA-DQA1-201ENST00000343139 NDUFC2O95298 119 aa7.92□□□□□ -1.14
HLA-DQA1-201ENST00000343139 IGKV2D-28P01615 120 aa7.92□□□□□ -1.14
HLA-DQA1-201ENST00000343139 FABP2P12104 132 aa7.92□□□□□ -1.14
HLA-DQA1-201ENST00000343139 RAB37Q96AX2 223 aa7.92□□□□□ -1.14
HLA-DQA1-201ENST00000343139 TRBV10-2A0A0K0K1G8 114 aa7.91□□□□□ -1.14
HLA-DQA1-201ENST00000343139 KRTAP13-1Q8IUC0 172 aa7.91□□□□□ -1.14
HLA-DQA1-201ENST00000343139 SPANXDQ9BXN6 97 aa7.91□□□□□ -1.14
HLA-DQA1-201ENST00000343139 SPANXCQ9NY87 97 aa7.91□□□□□ -1.14
HLA-DQA1-201ENST00000343139 K7ERJ3 54 aa7.9□□□□□ -1.14
HLA-DQA1-201ENST00000343139 KRTAP10-8P60410 259 aa7.9□□□□□ -1.14
HLA-DQA1-201ENST00000343139 DAND5Q8N907 189 aa7.9□□□□□ -1.14
HLA-DQA1-201ENST00000343139 LITAFQ99732 161 aa7.9□□□□□ -1.14
HLA-DQA1-201ENST00000343139 TMEM126AQ9H061 195 aa7.9□□□□□ -1.14
HLA-DQA1-201ENST00000343139 ADAMTSL4-AS1Q5T5F5 129 aa7.89□□□□□ -1.15
HLA-DQA1-201ENST00000343139 LYRM7Q5U5X0 104 aa7.88□□□□□ -1.15
HLA-DQA1-201ENST00000343139 KCNQ1DNQ9H478 68 aa7.88□□□□□ -1.15
HLA-DQA1-201ENST00000343139 SPCS1Q9Y6A9 102 aa7.88□□□□□ -1.15
HLA-DQA1-201ENST00000343139 A0A0B4J2C4 111 aa7.88□□□□□ -1.15
HLA-DQA1-201ENST00000343139 KRTAP1-4P0C5Y4 121 aa7.88□□□□□ -1.15
HLA-DQA1-201ENST00000343139 IFITM1P13164 125 aa7.88□□□□□ -1.15
HLA-DQA1-201ENST00000343139 PPDPFQ9H3Y8 114 aa7.88□□□□□ -1.15
HLA-DQA1-201ENST00000343139 PRYO14603 147 aa7.87□□□□□ -1.15
HLA-DQA1-201ENST00000343139 UBE2AP49459 152 aa7.87□□□□□ -1.15
HLA-DQA1-201ENST00000343139 COPS9Q8WXC6 57 aa7.87□□□□□ -1.15
HLA-DQA1-201ENST00000343139 NCR3O14931 201 aa7.86□□□□□ -1.15
HLA-DQA1-201ENST00000343139 SPRR1AP35321 89 aa7.86□□□□□ -1.15
HLA-DQA1-201ENST00000343139 SOSTDC1Q6X4U4 206 aa7.86□□□□□ -1.15
HLA-DQA1-201ENST00000343139 LINC00337Q8N6G1 96 aa7.85□□□□□ -1.15
HLA-DQA1-201ENST00000343139 LINC00308Q8TCZ7 52 aa7.85□□□□□ -1.15
HLA-DQA1-201ENST00000343139 TRBV10-3A0A0K0K1G6 114 aa7.84□□□□□ -1.15
HLA-DQA1-201ENST00000343139 A4D1N5 150 aa7.84□□□□□ -1.15
HLA-DQA1-201ENST00000343139 FAM19A1Q7Z5A9 133 aa7.84□□□□□ -1.15
HLA-DQA1-201ENST00000343139 NAA38Q9BRA0 125 aaKnown RBP7.84□□□□□ -1.15
HLA-DQA1-201ENST00000343139 IGLV6-57P01721 117 aa7.84□□□□□ -1.15
HLA-DQA1-201ENST00000343139 CFC1BP0CG36 223 aa7.84□□□□□ -1.15
HLA-DQA1-201ENST00000343139 CFC1P0CG37 223 aa7.84□□□□□ -1.15
HLA-DQA1-201ENST00000343139 MUSTN1Q8IVN3 82 aa7.84□□□□□ -1.15
HLA-DQA1-201ENST00000343139 PRO1854Q9UHT4 67 aa7.84□□□□□ -1.15
HLA-DQA1-201ENST00000343139 KRTAP4-16G5E9R7 235 aaPredicted RBP7.83□□□□□ -1.16
HLA-DQA1-201ENST00000343139 EIF4EBP3O60516 100 aaPredicted RBP7.83□□□□□ -1.16
HLA-DQA1-201ENST00000343139 TSPAN13O95857 204 aa7.83□□□□□ -1.16
HLA-DQA1-201ENST00000343139 RPL13AP40429 203 aaKnown RBP7.83□□□□□ -1.16
HLA-DQA1-201ENST00000343139 PRLHP81277 87 aa7.81□□□□□ -1.16
HLA-DQA1-201ENST00000343139 NPC2P61916 151 aa7.8□□□□□ -1.16
HLA-DQA1-201ENST00000343139 S100A7L2Q5SY68 101 aa7.8□□□□□ -1.16
HLA-DQA1-201ENST00000343139 PRR26Q8N8Z3 221 aa7.8□□□□□ -1.16
HLA-DQA1-201ENST00000343139 HMCN2Q8NDA2 5059 aa7.8□□□□□ -1.16
HLA-DQA1-201ENST00000343139 TRBV20-1A0A075B6N2 111 aa7.8□□□□□ -1.16
HLA-DQA1-201ENST00000343139 FAM229BQ4G0N7 80 aa7.8□□□□□ -1.16
HLA-DQA1-201ENST00000343139 ETDCA0A1B0GVM5 59 aa7.79□□□□□ -1.16
HLA-DQA1-201ENST00000343139 F8W1H4 67 aa7.78□□□□□ -1.16
HLA-DQA1-201ENST00000343139 PCP4P48539 62 aa7.78□□□□□ -1.16
HLA-DQA1-201ENST00000343139 TRAV23DV6A0A075B6W5 121 aa7.77□□□□□ -1.17
HLA-DQA1-201ENST00000343139 CRYGAP11844 174 aa7.77□□□□□ -1.17
HLA-DQA1-201ENST00000343139 B5MCH6 92 aa7.76□□□□□ -1.17
HLA-DQA1-201ENST00000343139 HIGD2AQ9BW72 106 aa7.76□□□□□ -1.17
HLA-DQA1-201ENST00000343139 ZNF73O43830 326 aaPredicted RBP7.76□□□□□ -1.17
HLA-DQA1-201ENST00000343139 Q6ZRX8 168 aa7.76□□□□□ -1.17
HLA-DQA1-201ENST00000343139 ZNF706Q9Y5V0 76 aaPredicted RBP7.76□□□□□ -1.17
HLA-DQA1-201ENST00000343139 A0A087X002 238 aa7.74□□□□□ -1.17
HLA-DQA1-201ENST00000343139 H3BMG7 143 aa7.74□□□□□ -1.17
HLA-DQA1-201ENST00000343139 K7ERU9 68 aa7.74□□□□□ -1.17
HLA-DQA1-201ENST00000343139 Q1RN00 199 aa7.74□□□□□ -1.17
HLA-DQA1-201ENST00000343139 SMCR5Q8TEV8 140 aa7.74□□□□□ -1.17
HLA-DQA1-201ENST00000343139 PSMB2P49721 201 aa7.73□□□□□ -1.17
HLA-DQA1-201ENST00000343139 OCIAD2Q56VL3 154 aa7.73□□□□□ -1.17
HLA-DQA1-201ENST00000343139 SPRR4Q96PI1 79 aa7.73□□□□□ -1.17
HLA-DQA1-201ENST00000343139 COX6CP09669 75 aa7.72□□□□□ -1.17
HLA-DQA1-201ENST00000343139 OR13C6PQ8NH95 151 aa7.72□□□□□ -1.17
HLA-DQA1-201ENST00000343139 PRO0461Q9UI25 63 aa7.72□□□□□ -1.17
HLA-DQA1-201ENST00000343139 SCGB1C2P0DMR2 95 aa7.71□□□□□ -1.17
HLA-DQA1-201ENST00000343139 TCL1BO95988 128 aa7.71□□□□□ -1.18
HLA-DQA1-201ENST00000343139 KRTAP13-2Q52LG2 175 aa7.71□□□□□ -1.18
HLA-DQA1-201ENST00000343139 TYMSOSQ8TAI1 123 aa7.71□□□□□ -1.18
HLA-DQA1-201ENST00000343139 Q9BRP9 147 aa7.71□□□□□ -1.18
HLA-DQA1-201ENST00000343139 ANAPC11Q9NYG5 84 aa7.71□□□□□ -1.18
HLA-DQA1-201ENST00000343139 TRAV13-2A0A0B4J235 113 aa7.7□□□□□ -1.18
HLA-DQA1-201ENST00000343139 ATXN8Q156A1 80 aa7.7□□□□□ -1.18
HLA-DQA1-201ENST00000343139 LINC00483Q53H64 154 aa7.7□□□□□ -1.18
HLA-DQA1-201ENST00000343139 TRBV7-6A0A0J9YX20 115 aa7.69□□□□□ -1.18
HLA-DQA1-201ENST00000343139 TRIAP1O43715 76 aa7.69□□□□□ -1.18
HLA-DQA1-201ENST00000343139 H7C2G1 150 aa7.68□□□□□ -1.18
HLA-DQA1-201ENST00000343139 J3QR89 54 aa7.67□□□□□ -1.18
HLA-DQA1-201ENST00000343139 ELOF1P60002 83 aaKnown RBP7.67□□□□□ -1.18
HLA-DQA1-201ENST00000343139 DHRS4-AS1Q9P1J3 65 aa7.67□□□□□ -1.18
HLA-DQA1-201ENST00000343139 ERC2-IT1O76042 136 aa7.67□□□□□ -1.18
HLA-DQA1-201ENST00000343139 C21orf62-AS1Q17RA5 79 aa7.66□□□□□ -1.18
HLA-DQA1-201ENST00000343139 C6orf99Q4VX62 202 aa7.66□□□□□ -1.18
HLA-DQA1-201ENST00000343139 COX7BP24311 80 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms