RNA–Protein interactions for RNA: ENST00000340107.8

FGFR3-202, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene FGFR3, Length 4,293 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-202ENST00000340107 CELSR2Q9HCU4 2923 aa12.39□□□□□ -0.43
FGFR3-202ENST00000340107 NHLRC4P0CG21 123 aaPredicted RBP12.37□□□□□ -0.43
FGFR3-202ENST00000340107 LINC00612Q8N6U2 182 aa12.37□□□□□ -0.43
FGFR3-202ENST00000340107 CIRBP-AS1Q8TBR5 109 aa12.37□□□□□ -0.43
FGFR3-202ENST00000340107 TRAV7A0A075B6U4 112 aa12.36□□□□□ -0.43
FGFR3-202ENST00000340107 K7EIL1 84 aa12.36□□□□□ -0.43
FGFR3-202ENST00000340107 CRYBG3Q68DQ2 2970 aa12.35□□□□□ -0.43
FGFR3-202ENST00000340107 TRBV7-7A0A0K0K1E9 115 aa12.35□□□□□ -0.43
FGFR3-202ENST00000340107 CHTF8P0CG12 524 aa12.34□□□□□ -0.43
FGFR3-202ENST00000340107 ELOF1P60002 83 aaKnown RBP12.34□□□□□ -0.43
FGFR3-202ENST00000340107 DCHS1Q96JQ0 3298 aa12.33□□□□□ -0.43
FGFR3-202ENST00000340107 PRR34Q9NV39 138 aa12.33□□□□□ -0.44
FGFR3-202ENST00000340107 DNAH10OSP0CZ25 163 aa12.33□□□□□ -0.44
FGFR3-202ENST00000340107 VPREB1P12018 145 aa12.33□□□□□ -0.44
FGFR3-202ENST00000340107 NF1P21359 2839 aa12.33□□□□□ -0.44
FGFR3-202ENST00000340107 FAM168BA1KXE4 195 aa12.32□□□□□ -0.44
FGFR3-202ENST00000340107 GVQW2A0A096LPI5 108 aaPredicted RBP12.31□□□□□ -0.44
FGFR3-202ENST00000340107 PHF5AQ7RTV0 110 aaKnown RBP12.31□□□□□ -0.44
FGFR3-202ENST00000340107 ST20-AS1Q8NBB2 130 aa12.31□□□□□ -0.44
FGFR3-202ENST00000340107 LINC00208Q96KT6 92 aa12.31□□□□□ -0.44
FGFR3-202ENST00000340107 NDUFC1O43677 76 aa12.29□□□□□ -0.44
FGFR3-202ENST00000340107 ASPMQ8IZT6 3477 aa12.29□□□□□ -0.44
FGFR3-202ENST00000340107 APCP25054 2843 aa12.29□□□□□ -0.44
FGFR3-202ENST00000340107 IGLV6-57P01721 117 aa12.28□□□□□ -0.44
FGFR3-202ENST00000340107 SERTAD4-AS1Q5TG53 156 aa12.28□□□□□ -0.44
FGFR3-202ENST00000340107 BRK1Q8WUW1 75 aa12.27□□□□□ -0.44
FGFR3-202ENST00000340107 IGHV6-1A0A0B4J1U7 121 aa12.27□□□□□ -0.45
FGFR3-202ENST00000340107 Q6ZRX8 168 aa12.27□□□□□ -0.45
FGFR3-202ENST00000340107 NBDYA0A0U1RRE5 68 aa12.27□□□□□ -0.45
FGFR3-202ENST00000340107 RELNP78509 3460 aa12.27□□□□□ -0.45
FGFR3-202ENST00000340107 Q6ZQT0 140 aa12.26□□□□□ -0.45
FGFR3-202ENST00000340107 FAM104AQ969W3 186 aa12.25□□□□□ -0.45
FGFR3-202ENST00000340107 C15orf56Q8N910 161 aa12.25□□□□□ -0.45
FGFR3-202ENST00000340107 HIVEP1P15822 2718 aa12.23□□□□□ -0.45
FGFR3-202ENST00000340107 CASC2Q6XLA1 102 aa12.23□□□□□ -0.45
FGFR3-202ENST00000340107 FBN2P35556 2912 aa12.21□□□□□ -0.45
FGFR3-202ENST00000340107 TRBV7-6A0A0J9YX20 115 aa12.21□□□□□ -0.45
FGFR3-202ENST00000340107 LAMA5O15230 3695 aa12.21□□□□□ -0.45
FGFR3-202ENST00000340107 CXCL6P80162 114 aa12.2□□□□□ -0.46
FGFR3-202ENST00000340107 TMEM254Q8TBM7 123 aa12.2□□□□□ -0.46
FGFR3-202ENST00000340107 HRNRQ86YZ3 2850 aaPredicted RBP12.2□□□□□ -0.46
FGFR3-202ENST00000340107 C16orf90A8MZG2 172 aa12.2□□□□□ -0.46
FGFR3-202ENST00000340107 DCHS2Q6V1P9 2916 aa12.19□□□□□ -0.46
FGFR3-202ENST00000340107 LINC00476Q8WZB0 136 aa12.18□□□□□ -0.46
FGFR3-202ENST00000340107 EPM2AB3EWF7 344 aa12.17□□□□□ -0.46
FGFR3-202ENST00000340107 CASC10Q5T4H9 136 aa12.17□□□□□ -0.46
FGFR3-202ENST00000340107 C9orf129Q5T035 196 aaKnown RBP12.16□□□□□ -0.46
FGFR3-202ENST00000340107 Q8NBF4 154 aa12.16□□□□□ -0.46
FGFR3-202ENST00000340107 STAB2Q8WWQ8 2551 aa12.15□□□□□ -0.46
FGFR3-202ENST00000340107 MOBPQ13875 183 aa12.15□□□□□ -0.46
FGFR3-202ENST00000340107 SMIM29Q86T20 159 aa12.15□□□□□ -0.46
FGFR3-202ENST00000340107 HCG22E2RYF7 251 aa12.15□□□□□ -0.46
FGFR3-202ENST00000340107 PCOTHQ58A44 107 aa12.14□□□□□ -0.47
FGFR3-202ENST00000340107 LINC00528Q8N1L1 170 aa12.14□□□□□ -0.47
FGFR3-202ENST00000340107 LOC110117498A0A087WWA1 95 aa12.14□□□□□ -0.47
FGFR3-202ENST00000340107 RETNLBQ9BQ08 111 aa12.13□□□□□ -0.47
FGFR3-202ENST00000340107 NIPBLQ6KC79 2804 aaeCLIP12.13□□□□□ -0.473e-7■■■■■ 27.8
FGFR3-202ENST00000340107 RTL8CO15255 209 aa12.12□□□□□ -0.47
FGFR3-202ENST00000340107 ATP5EP56381 51 aaPredicted RBP12.12□□□□□ -0.47
FGFR3-202ENST00000340107 TM2D3Q9BRN9 247 aa12.11□□□□□ -0.47
FGFR3-202ENST00000340107 SPTSSBQ8NFR3 76 aa12.11□□□□□ -0.47
FGFR3-202ENST00000340107 KCNQ1DNQ9H478 68 aa12.11□□□□□ -0.47
FGFR3-202ENST00000340107 IGLV1-50A0A075B6I6 118 aa12.1□□□□□ -0.47
FGFR3-202ENST00000340107 DMDP11532 3685 aa12.09□□□□□ -0.47
FGFR3-202ENST00000340107 H0Y9P7 68 aa12.08□□□□□ -0.48
FGFR3-202ENST00000340107 A0A0U1RQV1 116 aa12.07□□□□□ -0.48
FGFR3-202ENST00000340107 A0A0G2JQZ4 141 aa12.07□□□□□ -0.48
FGFR3-202ENST00000340107 A0A1W2PNN7 141 aa12.07□□□□□ -0.48
FGFR3-202ENST00000340107 KMT2BQ9UMN6 2715 aaPredicted RBP12.07□□□□□ -0.48
FGFR3-202ENST00000340107 SMIM26A0A096LP01 95 aa12.06□□□□□ -0.48
FGFR3-202ENST00000340107 RPL37AP61513 92 aaKnown RBP12.05□□□□□ -0.48
FGFR3-202ENST00000340107 SERP1Q9Y6X1 66 aa12.04□□□□□ -0.48
FGFR3-202ENST00000340107 CRYGAP11844 174 aa12.03□□□□□ -0.48
FGFR3-202ENST00000340107 Q8N377 158 aa12.02□□□□□ -0.48
FGFR3-202ENST00000340107 ZFHX4Q86UP3 3567 aa12.02□□□□□ -0.49
FGFR3-202ENST00000340107 SEC61GP60059 68 aa12.01□□□□□ -0.49
FGFR3-202ENST00000340107 BCE1O60756 84 aa12□□□□□ -0.49
FGFR3-202ENST00000340107 SPACA4Q8TDM5 124 aa11.99□□□□□ -0.49
FGFR3-202ENST00000340107 C1orf64Q8NEQ6 169 aa11.97□□□□□ -0.49
FGFR3-202ENST00000340107 ERC2-IT1O76042 136 aa11.96□□□□□ -0.49
FGFR3-202ENST00000340107 C9orf163Q8N9P6 203 aa11.96□□□□□ -0.5
FGFR3-202ENST00000340107 A0A1B0GW54 56 aa11.94□□□□□ -0.5
FGFR3-202ENST00000340107 A6NED7 52 aa11.94□□□□□ -0.5
FGFR3-202ENST00000340107 hDV103S1A0JD37 113 aa11.94□□□□□ -0.5
FGFR3-202ENST00000340107 K7EQZ3 153 aa11.94□□□□□ -0.5
FGFR3-202ENST00000340107 WWC2-AS2Q96NR7 200 aa11.94□□□□□ -0.5
FGFR3-202ENST00000340107 TRBV7-4A0A0J9YYF1 115 aa11.94□□□□□ -0.5
FGFR3-202ENST00000340107 MXRA5Q9NR99 2828 aa11.93□□□□□ -0.5
FGFR3-202ENST00000340107 WIPF1O43516 503 aa11.93□□□□□ -0.5
FGFR3-202ENST00000340107 TLX1NBP0CAT3 122 aa11.92□□□□□ -0.5
FGFR3-202ENST00000340107 APLNQ9ULZ1 77 aa11.92□□□□□ -0.5
FGFR3-202ENST00000340107 V9GYY9 64 aa11.92□□□□□ -0.5
FGFR3-202ENST00000340107 PSPHP1O15172 72 aa11.91□□□□□ -0.5
FGFR3-202ENST00000340107 IGFL1Q6UW32 110 aa11.91□□□□□ -0.5
FGFR3-202ENST00000340107 A0A087WTM6 91 aa11.9□□□□□ -0.5
FGFR3-202ENST00000340107 TENM4Q6N022 2769 aa11.9□□□□□ -0.5
FGFR3-202ENST00000340107 ANAPC11Q9NYG5 84 aa11.89□□□□□ -0.51
FGFR3-202ENST00000340107 Q8NDZ9 215 aa11.89□□□□□ -0.51
FGFR3-202ENST00000340107 IGKV2D-30A0A075B6S6 120 aa11.86□□□□□ -0.51
FGFR3-202ENST00000340107 IGKV2-30P06310 120 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms