RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 RPL36ALQ969Q0 106 aaKnown RBP0.78□□□□□ -2.28
LINC00643-201ENST00000334389 NXT2Q9NPJ8 142 aaKnown RBP0.78□□□□□ -2.28
LINC00643-201ENST00000334389 IGLV4-69A0A075B6H9 119 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 IGLV8-61A0A075B6I0 122 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 A0A087WSZ3 146 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 A0A087WZ39 114 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 IGHV3OR16-9A0A0B4J2B5 98 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 TINCRA0A1B0GVN0 87 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 ZNF727A8MUV8 499 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 I3L3M4 83 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 K7EN84 100 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 TNFSF12O43508 249 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 SERF1AO75920 110 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 IGHV3-11P01762 117 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 IGHV3-30P01768 117 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 IGHV3-33P01772 117 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 ARL14EPLP0DKL9 152 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 IGHV3-30-5P0DP03 117 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 FABP2P12104 132 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 ORMDL2Q53FV1 153 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 PRR9Q5T870 116 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 MIC13Q5XKP0 118 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 Q6ZTI0 123 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 BAGE3Q86Y29 109 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 Q8N8P6 123 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 C15orf56Q8N910 161 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 COPS9Q8WXC6 57 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 FAM103A1Q9BTL3 118 aaKnown RBP0.77□□□□□ -2.29
LINC00643-201ENST00000334389 RPS10P5Q9NQ39 176 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 TRBV20OR9-2A0A075B6H5 130 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 TRBV25-1A0A075B6N4 114 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 A0A0J9YY99 117 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 UBE2L5PA0A1B0GUS4 154 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 LOC101927531A0A1B0GV80 90 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 ATOX1O00244 68 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 DPM2O94777 84 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 IGKV3-20P01619 116 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 DEFA5Q01523 94 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 TWIST1Q15672 202 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 GDF5OSQ5U4N7 250 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 FAM104BQ5XKR9 115 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 ENHOQ6UWT2 76 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 LINC00643Q86TS7 51 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 LINC00337Q8N6G1 96 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 TOMM6Q96B49 74 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 LITAFQ99732 161 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 Q9BRP9 147 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 A6NN06 94 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 TRACP01848 142 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 CD24P25063 80 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 ZNF80P51504 273 aaPredicted RBP0.77□□□□□ -2.29
LINC00643-201ENST00000334389 KIAA1644Q3SXP7 199 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 ZNF876PQ49A33 203 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 RNASE13Q5GAN3 156 aaKnown RBP0.77□□□□□ -2.29
LINC00643-201ENST00000334389 C1orf195Q5TG92 126 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 GOLT1AQ6ZVE7 132 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 PRR26Q8N8Z3 221 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 C20orf203Q8NBC4 194 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 SMCR5Q8TEV8 140 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 TMEM243Q9BU79 118 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 CYSTM1Q9H1C7 97 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 CDC42SE2Q9NRR3 84 aa0.77□□□□□ -2.29
LINC00643-201ENST00000334389 LOC110117498A0A087WWA1 95 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 A0A087WYN8 130 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 IGKV2D-26A0A0A0MRZ7 120 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 A0A1B0GUT8 65 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 C11orf86A6NJI1 115 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 KNCNA6PVL3 124 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 C9JAW5 83 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 F5H768 121 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 PRYO14603 147 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 ATP5LO75964 103 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 NPYP01303 97 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 PRH1P02810 166 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 ZNF22P17026 224 aaPredicted RBP0.76□□□□□ -2.29
LINC00643-201ENST00000334389 SPRR2DP22532 72 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 ELOF1P60002 83 aaKnown RBP0.76□□□□□ -2.29
LINC00643-201ENST00000334389 SEC61GP60059 68 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 HERVK_113P63121 156 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 HBBP68871 147 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 KHDC1LQ5JSQ8 128 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 UBE2D4Q9Y2X8 147 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 USP17L23D6RBM5 183 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 H3BTX0 84 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 J3QQQ9 107 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 HBDP02042 147 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 PFN2P35080 140 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 SS18Q15532 418 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 C2orf66Q6UXQ4 117 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 ANKRD29Q8N6D5 301 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 PRO1933Q9H354 126 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 Q9UF83 564 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 FXYD6-FXYD2A0A087WZ82 144 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 TRBV7-4A0A0J9YYF1 115 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 MYMXA0A1B0GTQ4 84 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 TMEM223A0PJW6 202 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 LST1O00453 97 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 NDUFS5O43920 106 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 LEPROTL1O95214 131 aa0.76□□□□□ -2.29
LINC00643-201ENST00000334389 MT-ATP8P03928 68 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms