RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 DSPP15924 2871 aaKnown RBP8.62□□□□□ -1.03
VSTM4-202ENST00000332853 USP34Q70CQ2 3546 aa8.62□□□□□ -1.03
VSTM4-202ENST00000332853 RPL37AP61513 92 aaKnown RBP8.61□□□□□ -1.03
VSTM4-202ENST00000332853 FRYLO94915 3013 aa8.61□□□□□ -1.03
VSTM4-202ENST00000332853 A6NED7 52 aa8.6□□□□□ -1.03
VSTM4-202ENST00000332853 CFAP46Q8IYW2 2715 aa8.6□□□□□ -1.03
VSTM4-202ENST00000332853 C9orf129Q5T035 196 aaKnown RBP8.59□□□□□ -1.03
VSTM4-202ENST00000332853 V9GYY9 64 aa8.59□□□□□ -1.03
VSTM4-202ENST00000332853 SMIM26A0A096LP01 95 aa8.59□□□□□ -1.03
VSTM4-202ENST00000332853 Q8NBF4 154 aa8.59□□□□□ -1.03
VSTM4-202ENST00000332853 FREM2Q5SZK8 3169 aa8.59□□□□□ -1.03
VSTM4-202ENST00000332853 IGLV1-50A0A075B6I6 118 aa8.58□□□□□ -1.04
VSTM4-202ENST00000332853 CASC10Q5T4H9 136 aa8.58□□□□□ -1.04
VSTM4-202ENST00000332853 SPACA4Q8TDM5 124 aa8.58□□□□□ -1.04
VSTM4-202ENST00000332853 BOD1L1Q8NFC6 3051 aa8.58□□□□□ -1.04
VSTM4-202ENST00000332853 C1orf64Q8NEQ6 169 aa8.56□□□□□ -1.04
VSTM4-202ENST00000332853 BCE1O60756 84 aa8.55□□□□□ -1.04
VSTM4-202ENST00000332853 KCNQ1DNQ9H478 68 aa8.55□□□□□ -1.04
VSTM4-202ENST00000332853 PSPHP1O15172 72 aa8.54□□□□□ -1.04
VSTM4-202ENST00000332853 TM2D3Q9BRN9 247 aa8.54□□□□□ -1.04
VSTM4-202ENST00000332853 A0A0G2JQZ4 141 aa8.54□□□□□ -1.04
VSTM4-202ENST00000332853 A0A1W2PNN7 141 aa8.54□□□□□ -1.04
VSTM4-202ENST00000332853 LINC00528Q8N1L1 170 aa8.54□□□□□ -1.04
VSTM4-202ENST00000332853 hDV103S1A0JD37 113 aa8.54□□□□□ -1.04
VSTM4-202ENST00000332853 SPINK1P00995 79 aa8.53□□□□□ -1.04
VSTM4-202ENST00000332853 LIMD2Q9BT23 127 aa8.53□□□□□ -1.04
VSTM4-202ENST00000332853 TNRC18O15417 2968 aaPredicted RBP8.53□□□□□ -1.04
VSTM4-202ENST00000332853 FAM104AQ969W3 186 aa8.53□□□□□ -1.04
VSTM4-202ENST00000332853 HELZ2Q9BYK8 2649 aaKnown RBP8.52□□□□□ -1.04
VSTM4-202ENST00000332853 USP24Q9UPU5 2620 aa8.51□□□□□ -1.05
VSTM4-202ENST00000332853 CRYGAP11844 174 aa8.51□□□□□ -1.05
VSTM4-202ENST00000332853 IGKV2D-30A0A075B6S6 120 aa8.51□□□□□ -1.05
VSTM4-202ENST00000332853 IGKV2-30P06310 120 aa8.51□□□□□ -1.05
VSTM4-202ENST00000332853 WWC2-AS2Q96NR7 200 aa8.5□□□□□ -1.05
VSTM4-202ENST00000332853 MAP1AP78559 2803 aaPredicted RBP8.49□□□□□ -1.05
VSTM4-202ENST00000332853 K7EQZ3 153 aa8.48□□□□□ -1.05
VSTM4-202ENST00000332853 Q8N377 158 aa8.48□□□□□ -1.05
VSTM4-202ENST00000332853 ATRQ13535 2644 aa8.48□□□□□ -1.05
VSTM4-202ENST00000332853 TRBV7-4A0A0J9YYF1 115 aa8.46□□□□□ -1.05
VSTM4-202ENST00000332853 A0A1B0GW54 56 aa8.46□□□□□ -1.06
VSTM4-202ENST00000332853 IGFL1Q6UW32 110 aa8.46□□□□□ -1.06
VSTM4-202ENST00000332853 TYMSOSQ8TAI1 123 aa8.45□□□□□ -1.06
VSTM4-202ENST00000332853 APLNQ9ULZ1 77 aa8.44□□□□□ -1.06
VSTM4-202ENST00000332853 MGAM2Q2M2H8 2515 aa8.44□□□□□ -1.06
VSTM4-202ENST00000332853 ANAPC11Q9NYG5 84 aa8.43□□□□□ -1.06
VSTM4-202ENST00000332853 A0A087WTM6 91 aa8.43□□□□□ -1.06
VSTM4-202ENST00000332853 NBEAQ8NFP9 2946 aa8.43□□□□□ -1.06
VSTM4-202ENST00000332853 ERC2-IT1O76042 136 aa8.43□□□□□ -1.06
VSTM4-202ENST00000332853 TLX1NBP0CAT3 122 aa8.43□□□□□ -1.06
VSTM4-202ENST00000332853 DMXL2Q8TDJ6 3036 aa8.41□□□□□ -1.06
VSTM4-202ENST00000332853 ADGRG4Q8IZF6 3080 aa8.41□□□□□ -1.06
VSTM4-202ENST00000332853 LINC00313P59037 77 aa8.41□□□□□ -1.06
VSTM4-202ENST00000332853 LRBAP50851 2863 aa8.41□□□□□ -1.06
VSTM4-202ENST00000332853 TP53AIP1Q9HCN2 124 aa8.4□□□□□ -1.06
VSTM4-202ENST00000332853 C7orf65Q6ZTY9 151 aa8.4□□□□□ -1.07
VSTM4-202ENST00000332853 C9orf163Q8N9P6 203 aa8.4□□□□□ -1.07
VSTM4-202ENST00000332853 KALRNO60229 2985 aa8.39□□□□□ -1.07
VSTM4-202ENST00000332853 PLA2G2DQ9UNK4 145 aa8.39□□□□□ -1.07
VSTM4-202ENST00000332853 A8MWP4 228 aa8.39□□□□□ -1.07
VSTM4-202ENST00000332853 ATMQ13315 3056 aa8.39□□□□□ -1.07
VSTM4-202ENST00000332853 TRAV22A0A0B4J277 110 aa8.37□□□□□ -1.07
VSTM4-202ENST00000332853 PLA2G1BP04054 148 aaKnown RBP8.37□□□□□ -1.07
VSTM4-202ENST00000332853 C4orf26Q17RF5 130 aa8.37□□□□□ -1.07
VSTM4-202ENST00000332853 IGSF10Q6WRI0 2623 aa8.37□□□□□ -1.07
VSTM4-202ENST00000332853 C1orf195Q5TG92 126 aa8.36□□□□□ -1.07
VSTM4-202ENST00000332853 MAST4O15021 2626 aa8.35□□□□□ -1.07
VSTM4-202ENST00000332853 FAM229AH3BQW9 127 aa8.35□□□□□ -1.07
VSTM4-202ENST00000332853 Q96NJ1 140 aa8.35□□□□□ -1.07
VSTM4-202ENST00000332853 ZNF861PO60384 105 aa8.34□□□□□ -1.07
VSTM4-202ENST00000332853 CHD6Q8TD26 2715 aa8.34□□□□□ -1.07
VSTM4-202ENST00000332853 PMAIP1Q13794 54 aa8.34□□□□□ -1.07
VSTM4-202ENST00000332853 SMR3BP02814 79 aaPredicted RBP8.33□□□□□ -1.08
VSTM4-202ENST00000332853 SPAG11AQ6PDA7 123 aa8.33□□□□□ -1.08
VSTM4-202ENST00000332853 CNBPP62633 177 aaKnown RBP8.33□□□□□ -1.08
VSTM4-202ENST00000332853 PSORS1C2Q9UIG4 136 aa8.33□□□□□ -1.08
VSTM4-202ENST00000332853 DMXL1Q9Y485 3027 aa8.32□□□□□ -1.08
VSTM4-202ENST00000332853 CFAP47Q6ZTR5 3102 aa8.32□□□□□ -1.08
VSTM4-202ENST00000332853 LOC400499M0QZD8 3231 aa8.31□□□□□ -1.08
VSTM4-202ENST00000332853 DSCR10P59022 87 aa8.31□□□□□ -1.08
VSTM4-202ENST00000332853 A0A1W2PNM2 257 aa8.31□□□□□ -1.08
VSTM4-202ENST00000332853 Q8NDZ9 215 aa8.31□□□□□ -1.08
VSTM4-202ENST00000332853 MRPL34Q9BQ48 92 aaKnown RBP8.3□□□□□ -1.08
VSTM4-202ENST00000332853 ACYP2P14621 99 aa8.29□□□□□ -1.08
VSTM4-202ENST00000332853 TEX15Q9BXT5 2789 aa8.29□□□□□ -1.08
VSTM4-202ENST00000332853 WIPF1O43516 503 aa8.29□□□□□ -1.08
VSTM4-202ENST00000332853 PRR15Q8IV56 129 aa8.29□□□□□ -1.08
VSTM4-202ENST00000332853 COL12A1Q99715 3063 aa8.28□□□□□ -1.08
VSTM4-202ENST00000332853 WDFY3Q8IZQ1 3526 aa8.28□□□□□ -1.08
VSTM4-202ENST00000332853 H3BPC8 53 aa8.27□□□□□ -1.08
VSTM4-202ENST00000332853 OBSCN-AS1Q96MR7 158 aa8.27□□□□□ -1.09
VSTM4-202ENST00000332853 C8orf17Q9NRJ1 99 aa8.27□□□□□ -1.09
VSTM4-202ENST00000332853 IGLV7-43P04211 117 aa8.26□□□□□ -1.09
VSTM4-202ENST00000332853 RPS28P62857 69 aaKnown RBP8.26□□□□□ -1.09
VSTM4-202ENST00000332853 SPRR4Q96PI1 79 aa8.25□□□□□ -1.09
VSTM4-202ENST00000332853 IGLV5-37A0A075B6J1 123 aa8.25□□□□□ -1.09
VSTM4-202ENST00000332853 A0A1B0GU69 56 aa8.25□□□□□ -1.09
VSTM4-202ENST00000332853 TNP2Q05952 138 aa8.23□□□□□ -1.09
VSTM4-202ENST00000332853 TEP1Q99973 2627 aaKnown RBP8.23□□□□□ -1.09
VSTM4-202ENST00000332853 A0A1B0GVX0 72 aa8.23□□□□□ -1.09
VSTM4-202ENST00000332853 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms