RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 A0A1B0GWB2 263 aa10.65□□□□□ -0.7
RAB28-202ENST00000330852 K7ERJ3 54 aa10.64□□□□□ -0.71
RAB28-202ENST00000330852 TSPAN13O95857 204 aa10.64□□□□□ -0.71
RAB28-202ENST00000330852 ZNF625Q96I27 306 aaPredicted RBP10.64□□□□□ -0.71
RAB28-202ENST00000330852 TMEM126AQ9H061 195 aa10.64□□□□□ -0.71
RAB28-202ENST00000330852 NHP2Q9NX24 153 aaKnown RBP10.63□□□□□ -0.71
RAB28-202ENST00000330852 HIST1H4GQ99525 98 aa10.62□□□□□ -0.71
RAB28-202ENST00000330852 SPCS1Q9Y6A9 102 aa10.62□□□□□ -0.71
RAB28-202ENST00000330852 ZNF815PA8K554 130 aa10.61□□□□□ -0.71
RAB28-202ENST00000330852 FABP2P12104 132 aa10.61□□□□□ -0.71
RAB28-202ENST00000330852 OCIAD2Q56VL3 154 aa10.61□□□□□ -0.71
RAB28-202ENST00000330852 FAM19A1Q7Z5A9 133 aa10.61□□□□□ -0.71
RAB28-202ENST00000330852 HERVK_113P61574 105 aa10.61□□□□□ -0.71
RAB28-202ENST00000330852 KRTAP13-2Q52LG2 175 aa10.61□□□□□ -0.71
RAB28-202ENST00000330852 PLEKHB2Q96CS7 222 aa10.61□□□□□ -0.71
RAB28-202ENST00000330852 M0R378 163 aa10.6□□□□□ -0.71
RAB28-202ENST00000330852 PRLHP81277 87 aa10.6□□□□□ -0.71
RAB28-202ENST00000330852 ANAPC11Q9NYG5 84 aa10.6□□□□□ -0.71
RAB28-202ENST00000330852 CBY1Q9Y3M2 126 aa10.6□□□□□ -0.71
RAB28-202ENST00000330852 TMEM223A0PJW6 202 aa10.59□□□□□ -0.71
RAB28-202ENST00000330852 LINC00158P58513 81 aa10.59□□□□□ -0.71
RAB28-202ENST00000330852 TSPEAR-AS2P59090 65 aa10.59□□□□□ -0.71
RAB28-202ENST00000330852 TMEM238C9JI98 176 aa10.58□□□□□ -0.72
RAB28-202ENST00000330852 LINC00304Q8N9R0 145 aa10.58□□□□□ -0.72
RAB28-202ENST00000330852 Q8NDZ9 215 aa10.57□□□□□ -0.72
RAB28-202ENST00000330852 SPANXB1Q9NS25 103 aaPredicted RBP10.57□□□□□ -0.72
RAB28-202ENST00000330852 HERV-K104P63124 156 aa10.55□□□□□ -0.72
RAB28-202ENST00000330852 SCGB1D4Q6XE38 83 aa10.55□□□□□ -0.72
RAB28-202ENST00000330852 J3QQQ9 107 aa10.54□□□□□ -0.72
RAB28-202ENST00000330852 LEPROTO15243 131 aa10.54□□□□□ -0.72
RAB28-202ENST00000330852 TMEM238LA0A1B0GVL6 79 aa10.52□□□□□ -0.73
RAB28-202ENST00000330852 A6NJY4 79 aa10.52□□□□□ -0.73
RAB28-202ENST00000330852 K7ERU9 68 aa10.52□□□□□ -0.73
RAB28-202ENST00000330852 MEIG1Q5JSS6 88 aa10.52□□□□□ -0.73
RAB28-202ENST00000330852 A0A0U1RRA0 63 aa10.51□□□□□ -0.73
RAB28-202ENST00000330852 HIGD2AQ9BW72 106 aa10.51□□□□□ -0.73
RAB28-202ENST00000330852 PRYO14603 147 aa10.5□□□□□ -0.73
RAB28-202ENST00000330852 LGALS3P17931 250 aaKnown RBP10.5□□□□□ -0.73
RAB28-202ENST00000330852 ZNF706Q9Y5V0 76 aaPredicted RBP10.5□□□□□ -0.73
RAB28-202ENST00000330852 A0A0U1RQV1 116 aa10.5□□□□□ -0.73
RAB28-202ENST00000330852 SPAG11AQ6PDA7 123 aa10.49□□□□□ -0.73
RAB28-202ENST00000330852 MIR7-3HGQ8N6C7 128 aa10.49□□□□□ -0.73
RAB28-202ENST00000330852 LINC00337Q8N6G1 96 aa10.49□□□□□ -0.73
RAB28-202ENST00000330852 NDUFA12Q9UI09 145 aa10.49□□□□□ -0.73
RAB28-202ENST00000330852 SPRR4Q96PI1 79 aa10.48□□□□□ -0.73
RAB28-202ENST00000330852 KCNQ1DNQ9H478 68 aa10.48□□□□□ -0.73
RAB28-202ENST00000330852 PRO0461Q9UI25 63 aa10.47□□□□□ -0.73
RAB28-202ENST00000330852 SPRR1AP35321 89 aa10.47□□□□□ -0.73
RAB28-202ENST00000330852 F8W1H4 67 aa10.46□□□□□ -0.74
RAB28-202ENST00000330852 CFC1BP0CG36 223 aa10.45□□□□□ -0.74
RAB28-202ENST00000330852 CFC1P0CG37 223 aa10.45□□□□□ -0.74
RAB28-202ENST00000330852 TPRXLQ17RH7 258 aa10.45□□□□□ -0.74
RAB28-202ENST00000330852 H3BMG7 143 aa10.44□□□□□ -0.74
RAB28-202ENST00000330852 C3orf22Q8N5N4 141 aa10.44□□□□□ -0.74
RAB28-202ENST00000330852 RETNLBQ9BQ08 111 aa10.44□□□□□ -0.74
RAB28-202ENST00000330852 LOC107984156A0A0G2JMH3 177 aa10.44□□□□□ -0.74
RAB28-202ENST00000330852 ARL17AQ8IVW1 177 aa10.44□□□□□ -0.74
RAB28-202ENST00000330852 IGLV7-46A0A075B6I9 117 aa10.43□□□□□ -0.74
RAB28-202ENST00000330852 A0A0J9YXY3 114 aa10.43□□□□□ -0.74
RAB28-202ENST00000330852 ETDCA0A1B0GVM5 59 aa10.43□□□□□ -0.74
RAB28-202ENST00000330852 NCR3O14931 201 aa10.43□□□□□ -0.74
RAB28-202ENST00000330852 EIF4EBP3O60516 100 aaPredicted RBP10.43□□□□□ -0.74
RAB28-202ENST00000330852 LITAFQ99732 161 aa10.43□□□□□ -0.74
RAB28-202ENST00000330852 VPS25Q9BRG1 176 aa10.43□□□□□ -0.74
RAB28-202ENST00000330852 KRTAP4-16G5E9R7 235 aaPredicted RBP10.42□□□□□ -0.74
RAB28-202ENST00000330852 C4orf48Q5BLP8 95 aa10.41□□□□□ -0.74
RAB28-202ENST00000330852 TRBV10-3A0A0K0K1G6 114 aa10.41□□□□□ -0.74
RAB28-202ENST00000330852 TRBV10-2A0A0K0K1G8 114 aa10.41□□□□□ -0.74
RAB28-202ENST00000330852 PCP4P48539 62 aa10.41□□□□□ -0.74
RAB28-202ENST00000330852 SMCR5Q8TEV8 140 aa10.41□□□□□ -0.74
RAB28-202ENST00000330852 CDIP1Q9H305 208 aa10.41□□□□□ -0.74
RAB28-202ENST00000330852 A0A0B4J2C4 111 aa10.4□□□□□ -0.74
RAB28-202ENST00000330852 A4D1N5 150 aa10.4□□□□□ -0.74
RAB28-202ENST00000330852 PRO1854Q9UHT4 67 aa10.39□□□□□ -0.75
RAB28-202ENST00000330852 MUSTN1Q8IVN3 82 aa10.38□□□□□ -0.75
RAB28-202ENST00000330852 MUC2Q02817 5179 aa10.38□□□□□ -0.75
RAB28-202ENST00000330852 LYRM7Q5U5X0 104 aa10.38□□□□□ -0.75
RAB28-202ENST00000330852 FP248Q71RG6 208 aaPredicted RBP10.38□□□□□ -0.75
RAB28-202ENST00000330852 SPANXDQ9BXN6 97 aa10.38□□□□□ -0.75
RAB28-202ENST00000330852 SPANXCQ9NY87 97 aa10.38□□□□□ -0.75
RAB28-202ENST00000330852 SMCPP49901 116 aaPredicted RBP10.37□□□□□ -0.75
RAB28-202ENST00000330852 LINC00483Q53H64 154 aa10.37□□□□□ -0.75
RAB28-202ENST00000330852 B5MCH6 92 aa10.36□□□□□ -0.75
RAB28-202ENST00000330852 ETDBQ3ZM63 59 aa10.36□□□□□ -0.75
RAB28-202ENST00000330852 ADAMTSL4-AS1Q5T5F5 129 aa10.36□□□□□ -0.75
RAB28-202ENST00000330852 PPDPFQ9H3Y8 114 aa10.36□□□□□ -0.75
RAB28-202ENST00000330852 TIMM17BO60830 172 aa10.35□□□□□ -0.75
RAB28-202ENST00000330852 NDUFC2O95298 119 aa10.35□□□□□ -0.75
RAB28-202ENST00000330852 SPINK1P00995 79 aa10.35□□□□□ -0.75
RAB28-202ENST00000330852 MTURNQ8N3F0 131 aa10.35□□□□□ -0.75
RAB28-202ENST00000330852 TRBV20-1A0A075B6N2 111 aa10.34□□□□□ -0.75
RAB28-202ENST00000330852 TCL1BO95988 128 aa10.34□□□□□ -0.75
RAB28-202ENST00000330852 DAND5Q8N907 189 aa10.34□□□□□ -0.75
RAB28-202ENST00000330852 Q8NBF4 154 aa10.34□□□□□ -0.75
RAB28-202ENST00000330852 PSMB2P49721 201 aa10.33□□□□□ -0.76
RAB28-202ENST00000330852 C21orf62-AS1Q17RA5 79 aa10.31□□□□□ -0.76
RAB28-202ENST00000330852 Q6ZRX8 168 aa10.31□□□□□ -0.76
RAB28-202ENST00000330852 SSBP3-AS1Q7Z2R9 100 aa10.31□□□□□ -0.76
RAB28-202ENST00000330852 IGLV6-57P01721 117 aa10.3□□□□□ -0.76
RAB28-202ENST00000330852 S100A7L2Q5SY68 101 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms