RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 ZNF575Q86XF7 245 aa8.49□□□□□ -1.05
RAB11FIP1-202ENST00000330843 LINC00483Q53H64 154 aa8.48□□□□□ -1.05
RAB11FIP1-202ENST00000330843 IGLV5-48A0A075B6I7 105 aa8.48□□□□□ -1.05
RAB11FIP1-202ENST00000330843 COX6B2Q6YFQ2 88 aa8.48□□□□□ -1.05
RAB11FIP1-202ENST00000330843 C9orf163Q8N9P6 203 aa8.48□□□□□ -1.05
RAB11FIP1-202ENST00000330843 Q75L30 129 aa8.47□□□□□ -1.05
RAB11FIP1-202ENST00000330843 A0A1B0GVX0 72 aa8.47□□□□□ -1.05
RAB11FIP1-202ENST00000330843 Q8N377 158 aa8.46□□□□□ -1.05
RAB11FIP1-202ENST00000330843 GVQW2A0A096LPI5 108 aaPredicted RBP8.45□□□□□ -1.06
RAB11FIP1-202ENST00000330843 ANAPC11Q9NYG5 84 aa8.45□□□□□ -1.06
RAB11FIP1-202ENST00000330843 LINC00588Q9Y4M8 146 aa8.45□□□□□ -1.06
RAB11FIP1-202ENST00000330843 IGLV1-50A0A075B6I6 118 aa8.44□□□□□ -1.06
RAB11FIP1-202ENST00000330843 KRTAP16-1A8MUX0 517 aa8.43□□□□□ -1.06
RAB11FIP1-202ENST00000330843 DMAC1Q96GE9 116 aa8.43□□□□□ -1.06
RAB11FIP1-202ENST00000330843 PRR26Q8N8Z3 221 aa8.42□□□□□ -1.06
RAB11FIP1-202ENST00000330843 BPTFQ12830 3046 aa8.41□□□□□ -1.06
RAB11FIP1-202ENST00000330843 NAV2Q8IVL1 2488 aa8.4□□□□□ -1.06
RAB11FIP1-202ENST00000330843 IGLV5-37A0A075B6J1 123 aa8.4□□□□□ -1.07
RAB11FIP1-202ENST00000330843 LINC00528Q8N1L1 170 aa8.4□□□□□ -1.07
RAB11FIP1-202ENST00000330843 ABCA12Q86UK0 2595 aa8.39□□□□□ -1.07
RAB11FIP1-202ENST00000330843 KCNQ1DNQ9H478 68 aa8.39□□□□□ -1.07
RAB11FIP1-202ENST00000330843 SETD2Q9BYW2 2564 aaPredicted RBP8.39□□□□□ -1.07
RAB11FIP1-202ENST00000330843 NBDYA0A0U1RRE5 68 aa8.39□□□□□ -1.07
RAB11FIP1-202ENST00000330843 SPINK7P58062 85 aa8.38□□□□□ -1.07
RAB11FIP1-202ENST00000330843 C15orf56Q8N910 161 aa8.37□□□□□ -1.07
RAB11FIP1-202ENST00000330843 TLX1NBP0CAT3 122 aa8.37□□□□□ -1.07
RAB11FIP1-202ENST00000330843 FP248Q71RG6 208 aaPredicted RBP8.36□□□□□ -1.07
RAB11FIP1-202ENST00000330843 PKD1L2Q7Z442 2459 aa8.36□□□□□ -1.07
RAB11FIP1-202ENST00000330843 H3BNG1 76 aa8.35□□□□□ -1.07
RAB11FIP1-202ENST00000330843 Q8NAQ8 132 aa8.35□□□□□ -1.07
RAB11FIP1-202ENST00000330843 A0A1B0GU33 70 aa8.35□□□□□ -1.07
RAB11FIP1-202ENST00000330843 ANKRD17O75179 2603 aaKnown RBP8.34□□□□□ -1.07
RAB11FIP1-202ENST00000330843 LINC00304Q8N9R0 145 aa8.33□□□□□ -1.08
RAB11FIP1-202ENST00000330843 DNAH10OSP0CZ25 163 aa8.33□□□□□ -1.08
RAB11FIP1-202ENST00000330843 Q5VV11 94 aa8.31□□□□□ -1.08
RAB11FIP1-202ENST00000330843 OCR1Q9BZK8 76 aa8.31□□□□□ -1.08
RAB11FIP1-202ENST00000330843 JMJD1CQ15652 2540 aa8.31□□□□□ -1.08
RAB11FIP1-202ENST00000330843 LINC01558Q9Y6Z2 57 aa8.31□□□□□ -1.08
RAB11FIP1-202ENST00000330843 UTRNP46939 3433 aa8.3□□□□□ -1.08
RAB11FIP1-202ENST00000330843 POLQO75417 2590 aa8.3□□□□□ -1.08
RAB11FIP1-202ENST00000330843 J3QL48 77 aa8.29□□□□□ -1.08
RAB11FIP1-202ENST00000330843 CYSTM1Q9H1C7 97 aa8.29□□□□□ -1.08
RAB11FIP1-202ENST00000330843 Q8N9P0 234 aaPredicted RBP8.28□□□□□ -1.08
RAB11FIP1-202ENST00000330843 CAMK2N1Q7Z7J9 78 aa8.27□□□□□ -1.08
RAB11FIP1-202ENST00000330843 ZNF861PO60384 105 aa8.27□□□□□ -1.09
RAB11FIP1-202ENST00000330843 PCNTO95613 3336 aa8.26□□□□□ -1.09
RAB11FIP1-202ENST00000330843 SMR3BP02814 79 aaPredicted RBP8.26□□□□□ -1.09
RAB11FIP1-202ENST00000330843 DNAH12Q6ZR08 3092 aa8.25□□□□□ -1.09
RAB11FIP1-202ENST00000330843 IGF2RP11717 2491 aa8.25□□□□□ -1.09
RAB11FIP1-202ENST00000330843 A0A1W2PNM2 257 aa8.25□□□□□ -1.09
RAB11FIP1-202ENST00000330843 IGLV7-46A0A075B6I9 117 aa8.25□□□□□ -1.09
RAB11FIP1-202ENST00000330843 COL4A2P08572 1712 aa8.22□□□□□ -1.09
RAB11FIP1-202ENST00000330843 EP400Q96L91 3159 aa8.19□□□□□ -1.1
RAB11FIP1-202ENST00000330843 USP9XQ93008 2570 aaPredicted RBP8.18□□□□□ -1.1
RAB11FIP1-202ENST00000330843 SPTBN4Q9H254 2564 aa8.17□□□□□ -1.1
RAB11FIP1-202ENST00000330843 PSORS1C2Q9UIG4 136 aa8.16□□□□□ -1.1
RAB11FIP1-202ENST00000330843 PRRC2CQ9Y520 2896 aaKnown RBP8.15□□□□□ -1.1
RAB11FIP1-202ENST00000330843 OXTP01178 125 aa8.14□□□□□ -1.11
RAB11FIP1-202ENST00000330843 HRES1P13985 223 aa8.14□□□□□ -1.11
RAB11FIP1-202ENST00000330843 ROMO1P60602 79 aa8.14□□□□□ -1.11
RAB11FIP1-202ENST00000330843 IGLV7-43P04211 117 aa8.13□□□□□ -1.11
RAB11FIP1-202ENST00000330843 SPRR4Q96PI1 79 aa8.13□□□□□ -1.11
RAB11FIP1-202ENST00000330843 CASC10Q5T4H9 136 aa8.13□□□□□ -1.11
RAB11FIP1-202ENST00000330843 PRR34Q9NV39 138 aa8.13□□□□□ -1.11
RAB11FIP1-202ENST00000330843 C5orf42Q9H799 3197 aa8.12□□□□□ -1.11
RAB11FIP1-202ENST00000330843 KRTAP24-1Q3LI83 254 aa8.1□□□□□ -1.11
RAB11FIP1-202ENST00000330843 MTORP42345 2549 aa8.1□□□□□ -1.11
RAB11FIP1-202ENST00000330843 CNBPP62633 177 aaKnown RBP8.09□□□□□ -1.11
RAB11FIP1-202ENST00000330843 KRTAP10-11P60412 298 aa8.09□□□□□ -1.11
RAB11FIP1-202ENST00000330843 CHD8Q9HCK8 2581 aa8.08□□□□□ -1.12
RAB11FIP1-202ENST00000330843 A0A087WTM6 91 aa8.07□□□□□ -1.12
RAB11FIP1-202ENST00000330843 GIG44P09565 113 aaPredicted RBP8.07□□□□□ -1.12
RAB11FIP1-202ENST00000330843 C19orf73Q9NVV2 129 aa8.06□□□□□ -1.12
RAB11FIP1-202ENST00000330843 H1FX-AS1Q4G0G2 97 aa8.06□□□□□ -1.12
RAB11FIP1-202ENST00000330843 NCOR2Q9Y618 2525 aa8.04□□□□□ -1.12
RAB11FIP1-202ENST00000330843 NDUFAF8A1L188 74 aa8.04□□□□□ -1.12
RAB11FIP1-202ENST00000330843 CEP350Q5VT06 3117 aa8.02□□□□□ -1.13
RAB11FIP1-202ENST00000330843 USP24Q9UPU5 2620 aa8.01□□□□□ -1.13
RAB11FIP1-202ENST00000330843 S4R3F8 94 aa8.01□□□□□ -1.13
RAB11FIP1-202ENST00000330843 Q6ZSA8 131 aa8.01□□□□□ -1.13
RAB11FIP1-202ENST00000330843 C10orf142B7Z368 130 aa8□□□□□ -1.13
RAB11FIP1-202ENST00000330843 WWC2-AS2Q96NR7 200 aa7.99□□□□□ -1.13
RAB11FIP1-202ENST00000330843 USP9YO00507 2555 aaPredicted RBP7.98□□□□□ -1.13
RAB11FIP1-202ENST00000330843 M0R2T5 61 aa7.98□□□□□ -1.13
RAB11FIP1-202ENST00000330843 LINC00612Q8N6U2 182 aa7.98□□□□□ -1.13
RAB11FIP1-202ENST00000330843 CFAP54Q96N23 3096 aa7.97□□□□□ -1.13
RAB11FIP1-202ENST00000330843 K7EIL1 84 aa7.97□□□□□ -1.13
RAB11FIP1-202ENST00000330843 RPL37P61927 97 aaKnown RBP7.95□□□□□ -1.14
RAB11FIP1-202ENST00000330843 ANKRD11Q6UB99 2663 aaPredicted RBP7.95□□□□□ -1.14
RAB11FIP1-202ENST00000330843 A0A096LNT2 108 aa7.94□□□□□ -1.14
RAB11FIP1-202ENST00000330843 ASB16-AS1Q495Z4 193 aa7.93□□□□□ -1.14
RAB11FIP1-202ENST00000330843 A0A0C4DFX4 3053 aa7.92□□□□□ -1.14
RAB11FIP1-202ENST00000330843 MMP24-AS1A0A0U1RRL7 71 aa7.92□□□□□ -1.14
RAB11FIP1-202ENST00000330843 KRTAP10-3P60369 221 aa7.92□□□□□ -1.14
RAB11FIP1-202ENST00000330843 PLAC4Q8WY50 150 aa7.9□□□□□ -1.14
RAB11FIP1-202ENST00000330843 KRTAP25-1Q3LHN0 102 aa7.9□□□□□ -1.15
RAB11FIP1-202ENST00000330843 KLK9Q2XQG4 91 aa7.89□□□□□ -1.15
RAB11FIP1-202ENST00000330843 SEC61BP60468 96 aaKnown RBP7.89□□□□□ -1.15
RAB11FIP1-202ENST00000330843 Q5W150 140 aa7.89□□□□□ -1.15
RAB11FIP1-202ENST00000330843 R4GN34 69 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms