RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 ITPR2Q14571 2701 aa13.68□□□□□ -0.22
CMTM4-201ENST00000330687 H3BQ85 93 aa13.68□□□□□ -0.22
CMTM4-201ENST00000330687 TRAV22A0A0B4J277 110 aa13.67□□□□□ -0.22
CMTM4-201ENST00000330687 A0A0J9YWU9 116 aa13.66□□□□□ -0.22
CMTM4-201ENST00000330687 IGLV1-51P01701 117 aa13.66□□□□□ -0.22
CMTM4-201ENST00000330687 IGHV4-30-4P0DP06 118 aa13.66□□□□□ -0.22
CMTM4-201ENST00000330687 WFDC13Q8IUB5 93 aa13.66□□□□□ -0.22
CMTM4-201ENST00000330687 RPL37AP8A6NKH3 93 aa13.66□□□□□ -0.22
CMTM4-201ENST00000330687 A0A0G2JQZ4 141 aa13.65□□□□□ -0.22
CMTM4-201ENST00000330687 A0A1W2PNN7 141 aa13.65□□□□□ -0.22
CMTM4-201ENST00000330687 ST20-AS1Q8NBB2 130 aa13.64□□□□□ -0.23
CMTM4-201ENST00000330687 KPRPQ5T749 579 aaPredicted RBP13.64□□□□□ -0.23
CMTM4-201ENST00000330687 VWFP04275 2813 aa13.63□□□□□ -0.23
CMTM4-201ENST00000330687 NKAPP1Q8N9T2 125 aa13.63□□□□□ -0.23
CMTM4-201ENST00000330687 Q6ZRU5 148 aa13.63□□□□□ -0.23
CMTM4-201ENST00000330687 M0R378 163 aa13.62□□□□□ -0.23
CMTM4-201ENST00000330687 VPREB1P12018 145 aa13.62□□□□□ -0.23
CMTM4-201ENST00000330687 X6R8D5 127 aa13.62□□□□□ -0.23
CMTM4-201ENST00000330687 LINC00528Q8N1L1 170 aa13.61□□□□□ -0.23
CMTM4-201ENST00000330687 WFDC10BQ8IUB3 73 aa13.61□□□□□ -0.23
CMTM4-201ENST00000330687 K7EQZ3 153 aa13.61□□□□□ -0.23
CMTM4-201ENST00000330687 FSHBP01225 129 aa13.61□□□□□ -0.23
CMTM4-201ENST00000330687 CHKB-CPT1BH3BT56 60 aa13.6□□□□□ -0.23
CMTM4-201ENST00000330687 TEP1Q99973 2627 aaKnown RBP13.59□□□□□ -0.23
CMTM4-201ENST00000330687 PRR15Q8IV56 129 aa13.59□□□□□ -0.23
CMTM4-201ENST00000330687 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.58□□□□□ -0.23
CMTM4-201ENST00000330687 C1orf137Q5JT78 98 aa13.58□□□□□ -0.24
CMTM4-201ENST00000330687 ETDCA0A1B0GVM5 59 aa13.58□□□□□ -0.24
CMTM4-201ENST00000330687 Q8N377 158 aa13.57□□□□□ -0.24
CMTM4-201ENST00000330687 ZNF469Q96JG9 3925 aaPredicted RBP13.55□□□□□ -0.24
CMTM4-201ENST00000330687 LINC00208Q96KT6 92 aa13.55□□□□□ -0.24
CMTM4-201ENST00000330687 HIVEP1P15822 2718 aa13.54□□□□□ -0.24
CMTM4-201ENST00000330687 A0A1W2PNM2 257 aa13.54□□□□□ -0.24
CMTM4-201ENST00000330687 IGKV2D-24A0A075B6R9 120 aa13.53□□□□□ -0.24
CMTM4-201ENST00000330687 PDZD2O15018 2839 aa13.52□□□□□ -0.24
CMTM4-201ENST00000330687 PKD1L1Q8TDX9 2849 aa13.52□□□□□ -0.25
CMTM4-201ENST00000330687 LELP1Q5T871 98 aa13.51□□□□□ -0.25
CMTM4-201ENST00000330687 UBR5O95071 2799 aaPredicted RBP13.51□□□□□ -0.25
CMTM4-201ENST00000330687 Q1T7F1 81 aa13.51□□□□□ -0.25
CMTM4-201ENST00000330687 ATRQ13535 2644 aa13.5□□□□□ -0.25
CMTM4-201ENST00000330687 PRR15LQ9BU68 103 aa13.5□□□□□ -0.25
CMTM4-201ENST00000330687 UBE2BP63146 152 aa13.5□□□□□ -0.25
CMTM4-201ENST00000330687 MRPL55Q7Z7F7 128 aaKnown RBP13.48□□□□□ -0.25
CMTM4-201ENST00000330687 LYRM9A8MSI8 78 aa13.48□□□□□ -0.25
CMTM4-201ENST00000330687 PSCAO43653 123 aa13.47□□□□□ -0.25
CMTM4-201ENST00000330687 MP68P56378 58 aa13.47□□□□□ -0.25
CMTM4-201ENST00000330687 SYCNQ0VAF6 134 aa13.46□□□□□ -0.25
CMTM4-201ENST00000330687 SERTAD4-AS1Q5TG53 156 aa13.46□□□□□ -0.25
CMTM4-201ENST00000330687 EGFEM1PQ0D2K5 195 aa13.45□□□□□ -0.26
CMTM4-201ENST00000330687 DEFB113Q30KQ7 82 aa13.45□□□□□ -0.26
CMTM4-201ENST00000330687 C7orf33Q8WU49 177 aa13.45□□□□□ -0.26
CMTM4-201ENST00000330687 DSCR10P59022 87 aa13.45□□□□□ -0.26
CMTM4-201ENST00000330687 RPL37AP61513 92 aaKnown RBP13.44□□□□□ -0.26
CMTM4-201ENST00000330687 HCG22E2RYF7 251 aa13.44□□□□□ -0.26
CMTM4-201ENST00000330687 GVQW2A0A096LPI5 108 aaPredicted RBP13.43□□□□□ -0.26
CMTM4-201ENST00000330687 A6NED7 52 aa13.42□□□□□ -0.26
CMTM4-201ENST00000330687 FAM168BA1KXE4 195 aa13.42□□□□□ -0.26
CMTM4-201ENST00000330687 B9D2Q9BPU9 175 aa13.42□□□□□ -0.26
CMTM4-201ENST00000330687 SPART-AS1P0CW21 52 aa13.41□□□□□ -0.26
CMTM4-201ENST00000330687 PRR34Q9NV39 138 aa13.41□□□□□ -0.26
CMTM4-201ENST00000330687 Q8NBF4 154 aa13.4□□□□□ -0.26
CMTM4-201ENST00000330687 Q5VV11 94 aa13.37□□□□□ -0.27
CMTM4-201ENST00000330687 A0A087WSZ3 146 aa13.35□□□□□ -0.27
CMTM4-201ENST00000330687 IGLV5-48A0A075B6I7 105 aa13.35□□□□□ -0.27
CMTM4-201ENST00000330687 C15orf56Q8N910 161 aa13.35□□□□□ -0.27
CMTM4-201ENST00000330687 Q9BRP9 147 aa13.35□□□□□ -0.27
CMTM4-201ENST00000330687 A0A096LNI7 61 aa13.34□□□□□ -0.27
CMTM4-201ENST00000330687 CD164Q04900 197 aa13.34□□□□□ -0.27
CMTM4-201ENST00000330687 ZCCHC13Q8WW36 166 aaKnown RBP13.33□□□□□ -0.27
CMTM4-201ENST00000330687 UBE2AP49459 152 aa13.33□□□□□ -0.28
CMTM4-201ENST00000330687 NDUFB1O75438 58 aa13.32□□□□□ -0.28
CMTM4-201ENST00000330687 C16orf90A8MZG2 172 aa13.32□□□□□ -0.28
CMTM4-201ENST00000330687 H0Y9P7 68 aa13.31□□□□□ -0.28
CMTM4-201ENST00000330687 Q6ZRX8 168 aa13.31□□□□□ -0.28
CMTM4-201ENST00000330687 DHRS4-AS1Q9P1J3 65 aa13.3□□□□□ -0.28
CMTM4-201ENST00000330687 APOC4P55056 127 aa13.3□□□□□ -0.28
CMTM4-201ENST00000330687 TENM4Q6N022 2769 aa13.29□□□□□ -0.28
CMTM4-201ENST00000330687 PCOTHQ58A44 107 aa13.28□□□□□ -0.28
CMTM4-201ENST00000330687 LINC00476Q8WZB0 136 aa13.28□□□□□ -0.28
CMTM4-201ENST00000330687 KCNQ1DNQ9H478 68 aa13.28□□□□□ -0.28
CMTM4-201ENST00000330687 RBM12B-AS1Q9P1G2 102 aa13.27□□□□□ -0.28
CMTM4-201ENST00000330687 Q8NAQ8 132 aa13.26□□□□□ -0.29
CMTM4-201ENST00000330687 TENM1Q9UKZ4 2725 aa13.26□□□□□ -0.29
CMTM4-201ENST00000330687 CYP4F30PQ9H0H9 118 aa13.26□□□□□ -0.29
CMTM4-201ENST00000330687 SRRM2Q9UQ35 2752 aaKnown RBP13.25□□□□□ -0.29
CMTM4-201ENST00000330687 Q8N9P0 234 aaPredicted RBP13.25□□□□□ -0.29
CMTM4-201ENST00000330687 LCE6AA0A183 80 aa13.23□□□□□ -0.29
CMTM4-201ENST00000330687 PRLHP81277 87 aa13.22□□□□□ -0.29
CMTM4-201ENST00000330687 KTN1-AS1Q86SY8 53 aa13.22□□□□□ -0.29
CMTM4-201ENST00000330687 SPAG11AQ6PDA7 123 aa13.21□□□□□ -0.29
CMTM4-201ENST00000330687 CASC2Q6XLA1 102 aa13.21□□□□□ -0.29
CMTM4-201ENST00000330687 H0Y9J4 135 aa13.2□□□□□ -0.3
CMTM4-201ENST00000330687 KRTAP10-3P60369 221 aa13.2□□□□□ -0.3
CMTM4-201ENST00000330687 SMR3AQ99954 134 aa13.2□□□□□ -0.3
CMTM4-201ENST00000330687 LINC00588Q9Y4M8 146 aa13.19□□□□□ -0.3
CMTM4-201ENST00000330687 LIMD2Q9BT23 127 aa13.19□□□□□ -0.3
CMTM4-201ENST00000330687 IGKV2-24A0A0C4DH68 120 aa13.19□□□□□ -0.3
CMTM4-201ENST00000330687 LCA10Q71F78 164 aa13.18□□□□□ -0.3
CMTM4-201ENST00000330687 NBEAL1Q6ZS30 2694 aa13.17□□□□□ -0.3
CMTM4-201ENST00000330687 IGFL1Q6UW32 110 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms