RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 CYSTM1Q9H1C7 97 aa9.52□□□□□ -0.89
EPHB3-201ENST00000330394 REG3GQ6UW15 175 aa9.52□□□□□ -0.89
EPHB3-201ENST00000330394 RELNP78509 3460 aa9.52□□□□□ -0.89
EPHB3-201ENST00000330394 SEC61GP60059 68 aa9.51□□□□□ -0.89
EPHB3-201ENST00000330394 HELZ2Q9BYK8 2649 aaKnown RBP9.5□□□□□ -0.89
EPHB3-201ENST00000330394 PLAC8L1A1L4L8 177 aa9.5□□□□□ -0.89
EPHB3-201ENST00000330394 Q9BRP9 147 aa9.5□□□□□ -0.89
EPHB3-201ENST00000330394 ST20-AS1Q8NBB2 130 aa9.49□□□□□ -0.89
EPHB3-201ENST00000330394 CR1P17927 2039 aa9.49□□□□□ -0.89
EPHB3-201ENST00000330394 ZANQ9Y493 2812 aa9.49□□□□□ -0.89
EPHB3-201ENST00000330394 C22orf24Q9Y442 160 aa9.48□□□□□ -0.89
EPHB3-201ENST00000330394 KLKP1Q107X0 134 aa9.48□□□□□ -0.89
EPHB3-201ENST00000330394 IGSF10Q6WRI0 2623 aa9.47□□□□□ -0.89
EPHB3-201ENST00000330394 UBR5O95071 2799 aaPredicted RBP9.47□□□□□ -0.89
EPHB3-201ENST00000330394 IGLV6-57P01721 117 aa9.47□□□□□ -0.89
EPHB3-201ENST00000330394 LINC01600Q96MT4 127 aa9.47□□□□□ -0.89
EPHB3-201ENST00000330394 GIG44P09565 113 aaPredicted RBP9.47□□□□□ -0.89
EPHB3-201ENST00000330394 LINC00167Q96N53 147 aa9.47□□□□□ -0.89
EPHB3-201ENST00000330394 C14orf177Q52M58 125 aa9.46□□□□□ -0.9
EPHB3-201ENST00000330394 IGHV6-1A0A0B4J1U7 121 aa9.45□□□□□ -0.9
EPHB3-201ENST00000330394 C16orf95Q9H693 158 aa9.45□□□□□ -0.9
EPHB3-201ENST00000330394 C1orf64Q8NEQ6 169 aa9.45□□□□□ -0.9
EPHB3-201ENST00000330394 VPREB1P12018 145 aa9.44□□□□□ -0.9
EPHB3-201ENST00000330394 Q8NBF4 154 aa9.44□□□□□ -0.9
EPHB3-201ENST00000330394 COL6A5A8TX70 2615 aa9.44□□□□□ -0.9
EPHB3-201ENST00000330394 CSNK1G2-AS1Q8NCQ2 148 aa9.43□□□□□ -0.9
EPHB3-201ENST00000330394 Q6ZRP5 223 aa9.43□□□□□ -0.9
EPHB3-201ENST00000330394 RPL37AP61513 92 aaKnown RBP9.42□□□□□ -0.9
EPHB3-201ENST00000330394 A8MUN3 132 aa9.41□□□□□ -0.9
EPHB3-201ENST00000330394 A0A0G2JQZ4 141 aa9.4□□□□□ -0.9
EPHB3-201ENST00000330394 A0A1W2PNN7 141 aa9.4□□□□□ -0.9
EPHB3-201ENST00000330394 hDV103S1A0JD37 113 aa9.4□□□□□ -0.9
EPHB3-201ENST00000330394 K7EQZ3 153 aa9.4□□□□□ -0.9
EPHB3-201ENST00000330394 FSHBP01225 129 aa9.4□□□□□ -0.91
EPHB3-201ENST00000330394 IL17DQ8TAD2 202 aa9.4□□□□□ -0.91
EPHB3-201ENST00000330394 TRBV7-4A0A0J9YYF1 115 aa9.39□□□□□ -0.91
EPHB3-201ENST00000330394 LINC00476Q8WZB0 136 aa9.39□□□□□ -0.91
EPHB3-201ENST00000330394 Q6ZRX8 168 aa9.39□□□□□ -0.91
EPHB3-201ENST00000330394 NBEAL1Q6ZS30 2694 aa9.39□□□□□ -0.91
EPHB3-201ENST00000330394 A0A096LNT2 108 aa9.38□□□□□ -0.91
EPHB3-201ENST00000330394 RETNLBQ9BQ08 111 aa9.38□□□□□ -0.91
EPHB3-201ENST00000330394 UTP20O75691 2785 aaKnown RBP9.37□□□□□ -0.91
EPHB3-201ENST00000330394 LINC00528Q8N1L1 170 aa9.37□□□□□ -0.91
EPHB3-201ENST00000330394 FAM168BA1KXE4 195 aa9.37□□□□□ -0.91
EPHB3-201ENST00000330394 OBSCN-AS1Q96MR7 158 aa9.37□□□□□ -0.91
EPHB3-201ENST00000330394 C4orf48Q5BLP8 95 aa9.37□□□□□ -0.91
EPHB3-201ENST00000330394 SPAG11AQ6PDA7 123 aa9.37□□□□□ -0.91
EPHB3-201ENST00000330394 SERTAD4-AS1Q5TG53 156 aa9.36□□□□□ -0.91
EPHB3-201ENST00000330394 SETXQ7Z333 2677 aaKnown RBP9.36□□□□□ -0.91
EPHB3-201ENST00000330394 Q8NAQ8 132 aa9.36□□□□□ -0.91
EPHB3-201ENST00000330394 C19orf73Q9NVV2 129 aa9.35□□□□□ -0.91
EPHB3-201ENST00000330394 CRYBG3Q68DQ2 2970 aa9.34□□□□□ -0.91
EPHB3-201ENST00000330394 LIMD2Q9BT23 127 aa9.34□□□□□ -0.91
EPHB3-201ENST00000330394 LINC01556Q5JQF7 62 aa9.33□□□□□ -0.92
EPHB3-201ENST00000330394 GVQW2A0A096LPI5 108 aaPredicted RBP9.33□□□□□ -0.92
EPHB3-201ENST00000330394 Q8N377 158 aa9.32□□□□□ -0.92
EPHB3-201ENST00000330394 CIRBP-AS1Q8TBR5 109 aa9.31□□□□□ -0.92
EPHB3-201ENST00000330394 NF1P21359 2839 aa9.31□□□□□ -0.92
EPHB3-201ENST00000330394 ERC2-IT1O76042 136 aa9.3□□□□□ -0.92
EPHB3-201ENST00000330394 CSMD1Q96PZ7 3565 aa9.29□□□□□ -0.92
EPHB3-201ENST00000330394 FBN2P35556 2912 aa9.29□□□□□ -0.92
EPHB3-201ENST00000330394 Q5XG85 94 aa9.29□□□□□ -0.92
EPHB3-201ENST00000330394 SMG1Q96Q15 3661 aaKnown RBP9.29□□□□□ -0.92
EPHB3-201ENST00000330394 OXTP01178 125 aa9.29□□□□□ -0.92
EPHB3-201ENST00000330394 CELSR2Q9HCU4 2923 aa9.29□□□□□ -0.92
EPHB3-201ENST00000330394 BAHCC1Q9P281 2608 aa9.28□□□□□ -0.92
EPHB3-201ENST00000330394 DCHS2Q6V1P9 2916 aa9.28□□□□□ -0.92
EPHB3-201ENST00000330394 F8WDY8 70 aa9.28□□□□□ -0.92
EPHB3-201ENST00000330394 HRNRQ86YZ3 2850 aaPredicted RBP9.27□□□□□ -0.92
EPHB3-201ENST00000330394 PRR34Q9NV39 138 aa9.27□□□□□ -0.93
EPHB3-201ENST00000330394 Q8NDZ9 215 aa9.26□□□□□ -0.93
EPHB3-201ENST00000330394 TRAV22A0A0B4J277 110 aa9.26□□□□□ -0.93
EPHB3-201ENST00000330394 SPINK1P00995 79 aa9.26□□□□□ -0.93
EPHB3-201ENST00000330394 PHF5AQ7RTV0 110 aaKnown RBP9.25□□□□□ -0.93
EPHB3-201ENST00000330394 CHTF8P0CG12 524 aa9.25□□□□□ -0.93
EPHB3-201ENST00000330394 KCNQ1DNQ9H478 68 aa9.25□□□□□ -0.93
EPHB3-201ENST00000330394 A0A1B0GW54 56 aa9.24□□□□□ -0.93
EPHB3-201ENST00000330394 ZNF706Q9Y5V0 76 aaPredicted RBP9.24□□□□□ -0.93
EPHB3-201ENST00000330394 STAB1Q9NY15 2570 aa9.24□□□□□ -0.93
EPHB3-201ENST00000330394 A0A1W2PNM2 257 aa9.24□□□□□ -0.93
EPHB3-201ENST00000330394 C15orf56Q8N910 161 aa9.24□□□□□ -0.93
EPHB3-201ENST00000330394 ITPR2Q14571 2701 aa9.22□□□□□ -0.93
EPHB3-201ENST00000330394 WIPF1O43516 503 aa9.21□□□□□ -0.93
EPHB3-201ENST00000330394 FP248Q71RG6 208 aaPredicted RBP9.21□□□□□ -0.93
EPHB3-201ENST00000330394 EPM2AB3EWF7 344 aa9.21□□□□□ -0.94
EPHB3-201ENST00000330394 IGFL1Q6UW32 110 aa9.2□□□□□ -0.94
EPHB3-201ENST00000330394 LINC00612Q8N6U2 182 aa9.2□□□□□ -0.94
EPHB3-201ENST00000330394 CUBNO60494 3623 aa9.2□□□□□ -0.94
EPHB3-201ENST00000330394 IGLV1-50A0A075B6I6 118 aa9.2□□□□□ -0.94
EPHB3-201ENST00000330394 OCR1Q9BZK8 76 aa9.19□□□□□ -0.94
EPHB3-201ENST00000330394 LINC00588Q9Y4M8 146 aa9.19□□□□□ -0.94
EPHB3-201ENST00000330394 MOBPQ13875 183 aa9.18□□□□□ -0.94
EPHB3-201ENST00000330394 FAM229BQ4G0N7 80 aa9.18□□□□□ -0.94
EPHB3-201ENST00000330394 COA5Q86WW8 74 aa9.17□□□□□ -0.94
EPHB3-201ENST00000330394 SVEP1Q4LDE5 3571 aa9.16□□□□□ -0.94
EPHB3-201ENST00000330394 H3BNG1 76 aa9.16□□□□□ -0.94
EPHB3-201ENST00000330394 NSD1Q96L73 2696 aaPredicted RBP9.16□□□□□ -0.94
EPHB3-201ENST00000330394 IGKV2D-30A0A075B6S6 120 aa9.14□□□□□ -0.95
EPHB3-201ENST00000330394 IGKV2-30P06310 120 aa9.14□□□□□ -0.95
EPHB3-201ENST00000330394 KRTAP10-3P60369 221 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms