RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 TRBV7-6A0A0J9YX20 115 aa5.28□□□□□ -1.56
VMA21-201ENST00000330374 A0A0U1RQV1 116 aa5.28□□□□□ -1.56
VMA21-201ENST00000330374 KLKP1Q107X0 134 aa5.28□□□□□ -1.56
VMA21-201ENST00000330374 CD164Q04900 197 aa5.28□□□□□ -1.56
VMA21-201ENST00000330374 FP248Q71RG6 208 aaPredicted RBP5.28□□□□□ -1.56
VMA21-201ENST00000330374 HIVEP1P15822 2718 aa5.28□□□□□ -1.56
VMA21-201ENST00000330374 KRTAP1-3Q8IUG1 177 aa5.28□□□□□ -1.56
VMA21-201ENST00000330374 TENM1Q9UKZ4 2725 aa5.28□□□□□ -1.56
VMA21-201ENST00000330374 BRK1Q8WUW1 75 aa5.28□□□□□ -1.56
VMA21-201ENST00000330374 PDZD2O15018 2839 aa5.27□□□□□ -1.57
VMA21-201ENST00000330374 CXCL6P80162 114 aa5.27□□□□□ -1.57
VMA21-201ENST00000330374 CAMK2N2Q96S95 79 aa5.27□□□□□ -1.57
VMA21-201ENST00000330374 TMEM254Q8TBM7 123 aa5.26□□□□□ -1.57
VMA21-201ENST00000330374 IGLV5-52A0A0A0MRZ9 124 aa5.26□□□□□ -1.57
VMA21-201ENST00000330374 LINC00612Q8N6U2 182 aa5.26□□□□□ -1.57
VMA21-201ENST00000330374 LRCOL1A6NCL2 159 aa5.26□□□□□ -1.57
VMA21-201ENST00000330374 PDE6GP18545 87 aa5.26□□□□□ -1.57
VMA21-201ENST00000330374 PRO0628Q9UI54 55 aa5.26□□□□□ -1.57
VMA21-201ENST00000330374 BAHCC1Q9P281 2608 aa5.26□□□□□ -1.57
VMA21-201ENST00000330374 PRB2P02812 416 aaPredicted RBP5.25□□□□□ -1.57
VMA21-201ENST00000330374 TRRAPQ9Y4A5 3859 aa5.25□□□□□ -1.57
VMA21-201ENST00000330374 TRBV7-4A0A0J9YYF1 115 aa5.25□□□□□ -1.57
VMA21-201ENST00000330374 FAM229BQ4G0N7 80 aa5.25□□□□□ -1.57
VMA21-201ENST00000330374 SMR3AQ99954 134 aa5.25□□□□□ -1.57
VMA21-201ENST00000330374 HELZ2Q9BYK8 2649 aaKnown RBP5.25□□□□□ -1.57
VMA21-201ENST00000330374 A0A0J9YWU9 116 aa5.25□□□□□ -1.57
VMA21-201ENST00000330374 C9orf66Q5T8R8 295 aa5.25□□□□□ -1.57
VMA21-201ENST00000330374 HIGD2AQ9BW72 106 aa5.24□□□□□ -1.57
VMA21-201ENST00000330374 KRTAP10-3P60369 221 aa5.24□□□□□ -1.57
VMA21-201ENST00000330374 RPL37AP8A6NKH3 93 aa5.23□□□□□ -1.57
VMA21-201ENST00000330374 ELOF1P60002 83 aaKnown RBP5.23□□□□□ -1.57
VMA21-201ENST00000330374 HECTD1Q9ULT8 2610 aa5.23□□□□□ -1.57
VMA21-201ENST00000330374 Q6ZRU5 148 aa5.23□□□□□ -1.57
VMA21-201ENST00000330374 LELP1Q5T871 98 aa5.23□□□□□ -1.57
VMA21-201ENST00000330374 C16orf95Q9H693 158 aa5.23□□□□□ -1.57
VMA21-201ENST00000330374 K7ERS5 55 aa5.23□□□□□ -1.57
VMA21-201ENST00000330374 WFDC10BQ8IUB3 73 aa5.23□□□□□ -1.57
VMA21-201ENST00000330374 TENM4Q6N022 2769 aa5.22□□□□□ -1.57
VMA21-201ENST00000330374 BCE1O60756 84 aa5.22□□□□□ -1.57
VMA21-201ENST00000330374 IGKV4-1P06312 121 aa5.22□□□□□ -1.57
VMA21-201ENST00000330374 FUSP35637 526 aaKnown RBP eCLIP5.21□□□□□ -1.57
VMA21-201ENST00000330374 ANK3Q12955 4377 aaKnown RBP5.21□□□□□ -1.57
VMA21-201ENST00000330374 EPM2AB3EWF7 344 aa5.21□□□□□ -1.58
VMA21-201ENST00000330374 PRR4Q16378 134 aa5.21□□□□□ -1.58
VMA21-201ENST00000330374 SPART-AS1P0CW21 52 aa5.21□□□□□ -1.58
VMA21-201ENST00000330374 NDUFC1O43677 76 aa5.21□□□□□ -1.58
VMA21-201ENST00000330374 M0R378 163 aa5.2□□□□□ -1.58
VMA21-201ENST00000330374 SMIM29Q86T20 159 aa5.2□□□□□ -1.58
VMA21-201ENST00000330374 IGKV2D-24A0A075B6R9 120 aa5.19□□□□□ -1.58
VMA21-201ENST00000330374 PRR34Q9NV39 138 aa5.19□□□□□ -1.58
VMA21-201ENST00000330374 Q6ZRP5 223 aa5.19□□□□□ -1.58
VMA21-201ENST00000330374 NKAPP1Q8N9T2 125 aa5.19□□□□□ -1.58
VMA21-201ENST00000330374 Q8NAQ8 132 aa5.19□□□□□ -1.58
VMA21-201ENST00000330374 KRTAP1-1Q07627 177 aa5.19□□□□□ -1.58
VMA21-201ENST00000330374 H3BQ85 93 aa5.18□□□□□ -1.58
VMA21-201ENST00000330374 ZNF706Q9Y5V0 76 aaPredicted RBP5.18□□□□□ -1.58
VMA21-201ENST00000330374 OCR1Q9BZK8 76 aa5.18□□□□□ -1.58
VMA21-201ENST00000330374 GVQW2A0A096LPI5 108 aaPredicted RBP5.18□□□□□ -1.58
VMA21-201ENST00000330374 TENM3Q9P273 2699 aa5.17□□□□□ -1.58
VMA21-201ENST00000330374 A0A0G2JQZ4 141 aa5.17□□□□□ -1.58
VMA21-201ENST00000330374 A0A1W2PNN7 141 aa5.17□□□□□ -1.58
VMA21-201ENST00000330374 A6NED7 52 aa5.17□□□□□ -1.58
VMA21-201ENST00000330374 EGFEM1PQ0D2K5 195 aa5.17□□□□□ -1.58
VMA21-201ENST00000330374 ST20-AS1Q8NBB2 130 aa5.16□□□□□ -1.58
VMA21-201ENST00000330374 ESRGQ1W209 222 aa5.16□□□□□ -1.58
VMA21-201ENST00000330374 DEFB116Q30KQ4 102 aa5.16□□□□□ -1.58
VMA21-201ENST00000330374 KPRPQ5T749 579 aaPredicted RBP5.16□□□□□ -1.58
VMA21-201ENST00000330374 Q8N377 158 aa5.16□□□□□ -1.58
VMA21-201ENST00000330374 C15orf56Q8N910 161 aa5.16□□□□□ -1.58
VMA21-201ENST00000330374 OTOGQ6ZRI0 2925 aa5.16□□□□□ -1.58
VMA21-201ENST00000330374 LINC00476Q8WZB0 136 aa5.16□□□□□ -1.58
VMA21-201ENST00000330374 FLNBO75369 2602 aaKnown RBP5.16□□□□□ -1.58
VMA21-201ENST00000330374 ATP5EP56381 51 aaPredicted RBP5.15□□□□□ -1.58
VMA21-201ENST00000330374 FAM168BA1KXE4 195 aa5.15□□□□□ -1.58
VMA21-201ENST00000330374 C7orf33Q8WU49 177 aa5.15□□□□□ -1.58
VMA21-201ENST00000330374 NOTCH1P46531 2555 aa5.15□□□□□ -1.59
VMA21-201ENST00000330374 SYCNQ0VAF6 134 aa5.14□□□□□ -1.59
VMA21-201ENST00000330374 MP68P56378 58 aa5.14□□□□□ -1.59
VMA21-201ENST00000330374 PMAIP1Q13794 54 aa5.14□□□□□ -1.59
VMA21-201ENST00000330374 C1orf137Q5JT78 98 aa5.14□□□□□ -1.59
VMA21-201ENST00000330374 Q6ZTC4 211 aa5.14□□□□□ -1.59
VMA21-201ENST00000330374 MAST4O15021 2626 aa5.14□□□□□ -1.59
VMA21-201ENST00000330374 PSPHP1O15172 72 aa5.14□□□□□ -1.59
VMA21-201ENST00000330374 A0A1W2PNM2 257 aa5.13□□□□□ -1.59
VMA21-201ENST00000330374 DHRS4-AS1Q9P1J3 65 aa5.13□□□□□ -1.59
VMA21-201ENST00000330374 ETDCA0A1B0GVM5 59 aa5.13□□□□□ -1.59
VMA21-201ENST00000330374 K7EQZ3 153 aa5.12□□□□□ -1.59
VMA21-201ENST00000330374 UBE2BP63146 152 aa5.12□□□□□ -1.59
VMA21-201ENST00000330374 WWC2-AS2Q96NR7 200 aa5.12□□□□□ -1.59
VMA21-201ENST00000330374 ERC2-IT1O76042 136 aa5.12□□□□□ -1.59
VMA21-201ENST00000330374 NSD1Q96L73 2696 aaPredicted RBP5.12□□□□□ -1.59
VMA21-201ENST00000330374 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.12□□□□□ -1.59
VMA21-201ENST00000330374 WFDC13Q8IUB5 93 aa5.11□□□□□ -1.59
VMA21-201ENST00000330374 KRTAP26-1Q6PEX3 210 aa5.11□□□□□ -1.59
VMA21-201ENST00000330374 Q9BRP9 147 aa5.11□□□□□ -1.59
VMA21-201ENST00000330374 COL6A5A8TX70 2615 aa5.11□□□□□ -1.59
VMA21-201ENST00000330374 C1orf64Q8NEQ6 169 aa5.11□□□□□ -1.59
VMA21-201ENST00000330374 SRRM2Q9UQ35 2752 aaKnown RBP5.1□□□□□ -1.59
VMA21-201ENST00000330374 C11orf45Q8TAV5 145 aa5.09□□□□□ -1.59
VMA21-201ENST00000330374 KCNQ1DNQ9H478 68 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms