RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 A0A1B0GW54 56 aa8.34□□□□□ -1.07
CCDC60-201ENST00000327554 KRTAP26-1Q6PEX3 210 aa8.34□□□□□ -1.07
CCDC60-201ENST00000327554 PMAIP1Q13794 54 aa8.34□□□□□ -1.08
CCDC60-201ENST00000327554 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.33□□□□□ -1.08
CCDC60-201ENST00000327554 ETDCA0A1B0GVM5 59 aa8.33□□□□□ -1.08
CCDC60-201ENST00000327554 HTN3P15516 51 aa8.33□□□□□ -1.08
CCDC60-201ENST00000327554 DSCR10P59022 87 aa8.33□□□□□ -1.08
CCDC60-201ENST00000327554 TRAV22A0A0B4J277 110 aa8.32□□□□□ -1.08
CCDC60-201ENST00000327554 PSPHP1O15172 72 aa8.32□□□□□ -1.08
CCDC60-201ENST00000327554 CYP4F30PQ9H0H9 118 aa8.32□□□□□ -1.08
CCDC60-201ENST00000327554 KCNQ1DNQ9H478 68 aa8.32□□□□□ -1.08
CCDC60-201ENST00000327554 TNP2Q05952 138 aa8.32□□□□□ -1.08
CCDC60-201ENST00000327554 C15orf56Q8N910 161 aa8.32□□□□□ -1.08
CCDC60-201ENST00000327554 Q8NAQ8 132 aa8.3□□□□□ -1.08
CCDC60-201ENST00000327554 ST20-AS1Q8NBB2 130 aa8.3□□□□□ -1.08
CCDC60-201ENST00000327554 K7EQZ3 153 aa8.3□□□□□ -1.08
CCDC60-201ENST00000327554 Q8NBF4 154 aa8.3□□□□□ -1.08
CCDC60-201ENST00000327554 C1orf137Q5JT78 98 aa8.29□□□□□ -1.08
CCDC60-201ENST00000327554 PSCAO43653 123 aa8.28□□□□□ -1.08
CCDC60-201ENST00000327554 PRR4Q16378 134 aa8.28□□□□□ -1.08
CCDC60-201ENST00000327554 C7orf33Q8WU49 177 aa8.28□□□□□ -1.08
CCDC60-201ENST00000327554 SPRR4Q96PI1 79 aa8.28□□□□□ -1.08
CCDC60-201ENST00000327554 FLNAP21333 2647 aaKnown RBP8.28□□□□□ -1.08
CCDC60-201ENST00000327554 CCDC168Q8NDH2 2452 aa8.28□□□□□ -1.08
CCDC60-201ENST00000327554 SERTAD4-AS1Q5TG53 156 aa8.28□□□□□ -1.08
CCDC60-201ENST00000327554 WFDC10BQ8IUB3 73 aa8.27□□□□□ -1.09
CCDC60-201ENST00000327554 Q9BRP9 147 aa8.27□□□□□ -1.09
CCDC60-201ENST00000327554 CACNA1AO00555 2505 aa8.26□□□□□ -1.09
CCDC60-201ENST00000327554 KRTAP10-3P60369 221 aa8.26□□□□□ -1.09
CCDC60-201ENST00000327554 SPART-AS1P0CW21 52 aa8.26□□□□□ -1.09
CCDC60-201ENST00000327554 Q6ZRX8 168 aa8.26□□□□□ -1.09
CCDC60-201ENST00000327554 NKAPP1Q8N9T2 125 aa8.26□□□□□ -1.09
CCDC60-201ENST00000327554 DHRS4-AS1Q9P1J3 65 aa8.26□□□□□ -1.09
CCDC60-201ENST00000327554 A8MUN3 132 aa8.25□□□□□ -1.09
CCDC60-201ENST00000327554 KRTAP4-16G5E9R7 235 aaPredicted RBP8.25□□□□□ -1.09
CCDC60-201ENST00000327554 HCG22E2RYF7 251 aa8.24□□□□□ -1.09
CCDC60-201ENST00000327554 HIVEP2P31629 2446 aa8.24□□□□□ -1.09
CCDC60-201ENST00000327554 VWFP04275 2813 aa8.24□□□□□ -1.09
CCDC60-201ENST00000327554 APOC4P55056 127 aa8.24□□□□□ -1.09
CCDC60-201ENST00000327554 A8MU10 97 aa8.23□□□□□ -1.09
CCDC60-201ENST00000327554 UBR5O95071 2799 aaPredicted RBP8.23□□□□□ -1.09
CCDC60-201ENST00000327554 KRTAP1-1Q07627 177 aa8.23□□□□□ -1.09
CCDC60-201ENST00000327554 SYCNQ0VAF6 134 aa8.22□□□□□ -1.09
CCDC60-201ENST00000327554 MTORP42345 2549 aa8.22□□□□□ -1.09
CCDC60-201ENST00000327554 Q5VV11 94 aa8.22□□□□□ -1.09
CCDC60-201ENST00000327554 NDUFB1O75438 58 aa8.21□□□□□ -1.09
CCDC60-201ENST00000327554 RPL37AP8A6NKH3 93 aa8.21□□□□□ -1.1
CCDC60-201ENST00000327554 PRB2P02812 416 aaPredicted RBP8.21□□□□□ -1.1
CCDC60-201ENST00000327554 SPRR1AP35321 89 aa8.21□□□□□ -1.1
CCDC60-201ENST00000327554 PIEZO1Q92508 2521 aa8.2□□□□□ -1.1
CCDC60-201ENST00000327554 ZNF462Q96JM2 2506 aa8.2□□□□□ -1.1
CCDC60-201ENST00000327554 IGLV1-50A0A075B6I6 118 aa8.19□□□□□ -1.1
CCDC60-201ENST00000327554 HIVEP1P15822 2718 aa8.18□□□□□ -1.1
CCDC60-201ENST00000327554 B9D2Q9BPU9 175 aa8.18□□□□□ -1.1
CCDC60-201ENST00000327554 PLA2G2DQ9UNK4 145 aa8.18□□□□□ -1.1
CCDC60-201ENST00000327554 ACANP16112 2415 aa8.17□□□□□ -1.1
CCDC60-201ENST00000327554 FAM168BA1KXE4 195 aa8.17□□□□□ -1.1
CCDC60-201ENST00000327554 MP68P56378 58 aa8.16□□□□□ -1.1
CCDC60-201ENST00000327554 WFDC13Q8IUB5 93 aa8.16□□□□□ -1.1
CCDC60-201ENST00000327554 DEFB116Q30KQ4 102 aa8.15□□□□□ -1.1
CCDC60-201ENST00000327554 LINC00476Q8WZB0 136 aa8.15□□□□□ -1.1
CCDC60-201ENST00000327554 UNC79Q9P2D8 2635 aa8.15□□□□□ -1.1
CCDC60-201ENST00000327554 IGLV5-37A0A075B6J1 123 aa8.15□□□□□ -1.1
CCDC60-201ENST00000327554 IGKV2D-24A0A075B6R9 120 aa8.15□□□□□ -1.1
CCDC60-201ENST00000327554 A0A0G2JQZ4 141 aa8.15□□□□□ -1.1
CCDC60-201ENST00000327554 A0A1W2PNN7 141 aa8.15□□□□□ -1.1
CCDC60-201ENST00000327554 KRTAP7-1Q8IUC3 87 aa8.15□□□□□ -1.1
CCDC60-201ENST00000327554 Q8N9P0 234 aaPredicted RBP8.15□□□□□ -1.1
CCDC60-201ENST00000327554 LINC00208Q96KT6 92 aa8.15□□□□□ -1.1
CCDC60-201ENST00000327554 TLX1NBP0CAT3 122 aa8.14□□□□□ -1.11
CCDC60-201ENST00000327554 CD164Q04900 197 aa8.14□□□□□ -1.11
CCDC60-201ENST00000327554 UBE2BP63146 152 aa8.13□□□□□ -1.11
CCDC60-201ENST00000327554 SPANXA2-OT1Q8N9U9 137 aa8.13□□□□□ -1.11
CCDC60-201ENST00000327554 KRTAP29-1A8MX34 341 aaPredicted RBP8.12□□□□□ -1.11
CCDC60-201ENST00000327554 H3BNG1 76 aa8.12□□□□□ -1.11
CCDC60-201ENST00000327554 C16orf90A8MZG2 172 aa8.12□□□□□ -1.11
CCDC60-201ENST00000327554 IGFL1Q6UW32 110 aa8.12□□□□□ -1.11
CCDC60-201ENST00000327554 UBE2AP49459 152 aa8.11□□□□□ -1.11
CCDC60-201ENST00000327554 CHKB-CPT1BH3BT56 60 aa8.11□□□□□ -1.11
CCDC60-201ENST00000327554 LIMD2Q9BT23 127 aa8.11□□□□□ -1.11
CCDC60-201ENST00000327554 LINC00588Q9Y4M8 146 aa8.11□□□□□ -1.11
CCDC60-201ENST00000327554 PKD1L1Q8TDX9 2849 aa8.1□□□□□ -1.11
CCDC60-201ENST00000327554 LINC01556Q5JQF7 62 aa8.1□□□□□ -1.11
CCDC60-201ENST00000327554 H0Y9P7 68 aa8.09□□□□□ -1.11
CCDC60-201ENST00000327554 RPL37AP61513 92 aaKnown RBP8.09□□□□□ -1.11
CCDC60-201ENST00000327554 PRR15LQ9BU68 103 aa8.09□□□□□ -1.11
CCDC60-201ENST00000327554 PDZD2O15018 2839 aa8.08□□□□□ -1.12
CCDC60-201ENST00000327554 H3BPC8 53 aa8.08□□□□□ -1.12
CCDC60-201ENST00000327554 A0A087WSZ3 146 aa8.07□□□□□ -1.12
CCDC60-201ENST00000327554 MRPL55Q7Z7F7 128 aaKnown RBP8.07□□□□□ -1.12
CCDC60-201ENST00000327554 KTN1-AS1Q86SY8 53 aa8.07□□□□□ -1.12
CCDC60-201ENST00000327554 C9orf163Q8N9P6 203 aa8.07□□□□□ -1.12
CCDC60-201ENST00000327554 LCA10Q71F78 164 aa8.06□□□□□ -1.12
CCDC60-201ENST00000327554 IGLV8-61A0A075B6I0 122 aa8.05□□□□□ -1.12
CCDC60-201ENST00000327554 CASC2Q6XLA1 102 aa8.05□□□□□ -1.12
CCDC60-201ENST00000327554 Q75L30 129 aa8.05□□□□□ -1.12
CCDC60-201ENST00000327554 CNBPP62633 177 aaKnown RBP8.04□□□□□ -1.12
CCDC60-201ENST00000327554 REG3GQ6UW15 175 aa8.04□□□□□ -1.12
CCDC60-201ENST00000327554 RETNQ9HD89 108 aa8.03□□□□□ -1.12
CCDC60-201ENST00000327554 LOC101927531A0A1B0GV80 90 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms