RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 PSMB2P49721 201 aa9.5□□□□□ -0.89
PRPF3-201ENST00000324862 HSPG2P98160 4391 aa9.49□□□□□ -0.89
PRPF3-201ENST00000324862 C9orf118A6NHY6 69 aa9.49□□□□□ -0.89
PRPF3-201ENST00000324862 LBHQ53QV2 105 aaPredicted RBP9.49□□□□□ -0.89
PRPF3-201ENST00000324862 KCNQ1DNQ9H478 68 aa9.49□□□□□ -0.89
PRPF3-201ENST00000324862 SRRM2Q9UQ35 2752 aaKnown RBP9.49□□□□□ -0.89
PRPF3-201ENST00000324862 ZNF73O43830 326 aaPredicted RBP9.48□□□□□ -0.89
PRPF3-201ENST00000324862 RPL28P46779 137 aaKnown RBP9.48□□□□□ -0.89
PRPF3-201ENST00000324862 SMR3BP02814 79 aaPredicted RBP9.47□□□□□ -0.89
PRPF3-201ENST00000324862 RYR1P21817 5038 aa9.47□□□□□ -0.89
PRPF3-201ENST00000324862 CLEC2BQ92478 149 aa9.46□□□□□ -0.9
PRPF3-201ENST00000324862 REG3GQ6UW15 175 aa9.45□□□□□ -0.9
PRPF3-201ENST00000324862 PSORS1C2Q9UIG4 136 aa9.45□□□□□ -0.9
PRPF3-201ENST00000324862 FAM218AQ96MZ4 157 aa9.45□□□□□ -0.9
PRPF3-201ENST00000324862 KRTAP4-16G5E9R7 235 aaPredicted RBP9.44□□□□□ -0.9
PRPF3-201ENST00000324862 DIRC1Q969H9 104 aa9.44□□□□□ -0.9
PRPF3-201ENST00000324862 A0A1W2PPM0 123 aa9.44□□□□□ -0.9
PRPF3-201ENST00000324862 SCGB1C2P0DMR2 95 aa9.44□□□□□ -0.9
PRPF3-201ENST00000324862 PRLHP81277 87 aa9.44□□□□□ -0.9
PRPF3-201ENST00000324862 PRYO14603 147 aa9.43□□□□□ -0.9
PRPF3-201ENST00000324862 SPRR1AP35321 89 aa9.43□□□□□ -0.9
PRPF3-201ENST00000324862 A0A1B0GV90 55 aa9.42□□□□□ -0.9
PRPF3-201ENST00000324862 C1orf137Q5JT78 98 aa9.41□□□□□ -0.9
PRPF3-201ENST00000324862 FAM19A1Q7Z5A9 133 aa9.41□□□□□ -0.9
PRPF3-201ENST00000324862 ETDCA0A1B0GVM5 59 aa9.4□□□□□ -0.9
PRPF3-201ENST00000324862 B5MCH6 92 aa9.4□□□□□ -0.9
PRPF3-201ENST00000324862 TCL1BO95988 128 aa9.4□□□□□ -0.9
PRPF3-201ENST00000324862 ELOF1P60002 83 aaKnown RBP9.4□□□□□ -0.91
PRPF3-201ENST00000324862 COX7BP24311 80 aa9.39□□□□□ -0.91
PRPF3-201ENST00000324862 Q9BRP9 147 aa9.39□□□□□ -0.91
PRPF3-201ENST00000324862 FABP2P12104 132 aa9.39□□□□□ -0.91
PRPF3-201ENST00000324862 LINC00528Q8N1L1 170 aa9.38□□□□□ -0.91
PRPF3-201ENST00000324862 COX6CP09669 75 aa9.37□□□□□ -0.91
PRPF3-201ENST00000324862 Q6ZRX8 168 aa9.37□□□□□ -0.91
PRPF3-201ENST00000324862 KRTAP17-1Q9BYP8 105 aa9.37□□□□□ -0.91
PRPF3-201ENST00000324862 BCE1O60756 84 aa9.37□□□□□ -0.91
PRPF3-201ENST00000324862 ERC2-IT1O76042 136 aa9.36□□□□□ -0.91
PRPF3-201ENST00000324862 VAMP3Q15836 100 aa9.36□□□□□ -0.91
PRPF3-201ENST00000324862 SPCS1Q9Y6A9 102 aa9.36□□□□□ -0.91
PRPF3-201ENST00000324862 MTURNQ8N3F0 131 aa9.36□□□□□ -0.91
PRPF3-201ENST00000324862 LINC00575Q6W349 94 aa9.35□□□□□ -0.91
PRPF3-201ENST00000324862 SMCR5Q8TEV8 140 aa9.35□□□□□ -0.91
PRPF3-201ENST00000324862 HIGD2AQ9BW72 106 aa9.35□□□□□ -0.91
PRPF3-201ENST00000324862 H3BMG7 143 aa9.35□□□□□ -0.91
PRPF3-201ENST00000324862 UBE2AP49459 152 aa9.35□□□□□ -0.91
PRPF3-201ENST00000324862 CBY1Q9Y3M2 126 aa9.34□□□□□ -0.91
PRPF3-201ENST00000324862 BIRC6Q9NR09 4857 aa9.34□□□□□ -0.91
PRPF3-201ENST00000324862 H0YGX0 51 aa9.34□□□□□ -0.91
PRPF3-201ENST00000324862 KRTAP13-1Q8IUC0 172 aa9.34□□□□□ -0.91
PRPF3-201ENST00000324862 LST1O00453 97 aa9.33□□□□□ -0.92
PRPF3-201ENST00000324862 TRBV7-6A0A0J9YX20 115 aa9.33□□□□□ -0.92
PRPF3-201ENST00000324862 CDK2AP2O75956 126 aa9.32□□□□□ -0.92
PRPF3-201ENST00000324862 IGLV7-43P04211 117 aa9.32□□□□□ -0.92
PRPF3-201ENST00000324862 ST20-AS1Q8NBB2 130 aa9.32□□□□□ -0.92
PRPF3-201ENST00000324862 hADV29S1A0JD25 119 aa9.31□□□□□ -0.92
PRPF3-201ENST00000324862 K7EP34 96 aa9.31□□□□□ -0.92
PRPF3-201ENST00000324862 RPL37AP61513 92 aaKnown RBP9.3□□□□□ -0.92
PRPF3-201ENST00000324862 ATXN8Q156A1 80 aa9.3□□□□□ -0.92
PRPF3-201ENST00000324862 Q6ZQY7 126 aa9.3□□□□□ -0.92
PRPF3-201ENST00000324862 LYRM7Q5U5X0 104 aa9.29□□□□□ -0.92
PRPF3-201ENST00000324862 ZNF861PO60384 105 aa9.29□□□□□ -0.92
PRPF3-201ENST00000324862 TRBV20-1A0A075B6N2 111 aa9.28□□□□□ -0.92
PRPF3-201ENST00000324862 KRTAP10-4P60372 401 aaPredicted RBP9.28□□□□□ -0.92
PRPF3-201ENST00000324862 SLC25A20O43772 301 aa9.27□□□□□ -0.92
PRPF3-201ENST00000324862 DEFB105AQ8NG35 78 aa9.27□□□□□ -0.93
PRPF3-201ENST00000324862 H0Y9J4 135 aa9.26□□□□□ -0.93
PRPF3-201ENST00000324862 DHRS4-AS1Q9P1J3 65 aa9.26□□□□□ -0.93
PRPF3-201ENST00000324862 C9JAW5 83 aa9.26□□□□□ -0.93
PRPF3-201ENST00000324862 DNAL4O96015 105 aa9.25□□□□□ -0.93
PRPF3-201ENST00000324862 TRACP01848 142 aa9.25□□□□□ -0.93
PRPF3-201ENST00000324862 INAFM2P0DMQ5 153 aa9.24□□□□□ -0.93
PRPF3-201ENST00000324862 ANAPC11Q9NYG5 84 aa9.24□□□□□ -0.93
PRPF3-201ENST00000324862 Q5VSD8 79 aa9.23□□□□□ -0.93
PRPF3-201ENST00000324862 GTF2H5Q6ZYL4 71 aa9.23□□□□□ -0.93
PRPF3-201ENST00000324862 LINC01547P58512 204 aaPredicted RBP9.23□□□□□ -0.93
PRPF3-201ENST00000324862 C3orf22Q8N5N4 141 aa9.23□□□□□ -0.93
PRPF3-201ENST00000324862 A0A1B0GV72 72 aa9.22□□□□□ -0.93
PRPF3-201ENST00000324862 SMCPP49901 116 aaPredicted RBP9.22□□□□□ -0.93
PRPF3-201ENST00000324862 A0A1B0GX51 115 aa9.21□□□□□ -0.93
PRPF3-201ENST00000324862 UBE2V1Q13404 147 aa9.21□□□□□ -0.93
PRPF3-201ENST00000324862 GAGE2AQ6NT46 116 aa9.21□□□□□ -0.93
PRPF3-201ENST00000324862 PRO0461Q9UI25 63 aa9.21□□□□□ -0.93
PRPF3-201ENST00000324862 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.2□□□□□ -0.94
PRPF3-201ENST00000324862 Q8N377 158 aa9.2□□□□□ -0.94
PRPF3-201ENST00000324862 FAM229AH3BQW9 127 aa9.2□□□□□ -0.94
PRPF3-201ENST00000324862 BAALC-AS2P0C853 105 aa9.2□□□□□ -0.94
PRPF3-201ENST00000324862 ORMDL1Q9P0S3 153 aa9.2□□□□□ -0.94
PRPF3-201ENST00000324862 SNCGO76070 127 aa9.19□□□□□ -0.94
PRPF3-201ENST00000324862 HERC2O95714 4834 aa9.18□□□□□ -0.94
PRPF3-201ENST00000324862 SPRR4Q96PI1 79 aa9.17□□□□□ -0.94
PRPF3-201ENST00000324862 LRP1Q07954 4544 aaKnown RBP9.17□□□□□ -0.94
PRPF3-201ENST00000324862 IGLV5-48A0A075B6I7 105 aa9.16□□□□□ -0.94
PRPF3-201ENST00000324862 KRTAP4-5Q9BYR2 181 aa9.16□□□□□ -0.94
PRPF3-201ENST00000324862 Q8N1X5 172 aa9.16□□□□□ -0.94
PRPF3-201ENST00000324862 MYCBP2O75592 4640 aa9.16□□□□□ -0.94
PRPF3-201ENST00000324862 PLA2G1BP04054 148 aaKnown RBP9.15□□□□□ -0.94
PRPF3-201ENST00000324862 PKHD1L1Q86WI1 4243 aa9.15□□□□□ -0.95
PRPF3-201ENST00000324862 SMIM29Q86T20 159 aa9.14□□□□□ -0.95
PRPF3-201ENST00000324862 ANKRD29Q8N6D5 301 aa9.14□□□□□ -0.95
PRPF3-201ENST00000324862 ABCA13Q86UQ4 5058 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms