RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 LINC00315P59091 139 aa5.38□□□□□ -1.55
CIITA-201ENST00000324288 ITPR2Q14571 2701 aa5.38□□□□□ -1.55
CIITA-201ENST00000324288 MIR22HGQ0VDD5 57 aa5.38□□□□□ -1.55
CIITA-201ENST00000324288 LOC101927531A0A1B0GV80 90 aa5.38□□□□□ -1.55
CIITA-201ENST00000324288 CD164Q04900 197 aa5.38□□□□□ -1.55
CIITA-201ENST00000324288 CRIPTQ9P021 101 aa5.38□□□□□ -1.55
CIITA-201ENST00000324288 K7EQZ3 153 aa5.37□□□□□ -1.55
CIITA-201ENST00000324288 A0A0D9SG42 100 aa5.36□□□□□ -1.55
CIITA-201ENST00000324288 COX6B2Q6YFQ2 88 aa5.36□□□□□ -1.55
CIITA-201ENST00000324288 H3BPC8 53 aa5.36□□□□□ -1.55
CIITA-201ENST00000324288 C9orf129Q5T035 196 aaKnown RBP5.35□□□□□ -1.55
CIITA-201ENST00000324288 C9orf92A6NGG3 77 aa5.35□□□□□ -1.55
CIITA-201ENST00000324288 Q6ZRX8 168 aa5.35□□□□□ -1.55
CIITA-201ENST00000324288 FAM229AH3BQW9 127 aa5.35□□□□□ -1.55
CIITA-201ENST00000324288 KTN1-AS1Q86SY8 53 aa5.35□□□□□ -1.55
CIITA-201ENST00000324288 LCA10Q71F78 164 aa5.35□□□□□ -1.55
CIITA-201ENST00000324288 CEP350Q5VT06 3117 aa5.34□□□□□ -1.55
CIITA-201ENST00000324288 J3QL48 77 aa5.34□□□□□ -1.55
CIITA-201ENST00000324288 IGLV6-57P01721 117 aa5.34□□□□□ -1.56
CIITA-201ENST00000324288 ELOF1P60002 83 aaKnown RBP5.33□□□□□ -1.56
CIITA-201ENST00000324288 CYP4F30PQ9H0H9 118 aa5.33□□□□□ -1.56
CIITA-201ENST00000324288 DSCR10P59022 87 aa5.33□□□□□ -1.56
CIITA-201ENST00000324288 ITPR1Q14643 2758 aa5.33□□□□□ -1.56
CIITA-201ENST00000324288 IGLV5-45A0A087WSX0 123 aa5.33□□□□□ -1.56
CIITA-201ENST00000324288 H3BS24 57 aa5.33□□□□□ -1.56
CIITA-201ENST00000324288 Q6ZRP5 223 aa5.32□□□□□ -1.56
CIITA-201ENST00000324288 PRO3102Q9H379 93 aa5.32□□□□□ -1.56
CIITA-201ENST00000324288 UQCR11O14957 56 aa5.32□□□□□ -1.56
CIITA-201ENST00000324288 A8MWP4 228 aa5.32□□□□□ -1.56
CIITA-201ENST00000324288 COL4A2P08572 1712 aa5.31□□□□□ -1.56
CIITA-201ENST00000324288 LINC00588Q9Y4M8 146 aa5.31□□□□□ -1.56
CIITA-201ENST00000324288 LINC01554Q52M75 96 aa5.31□□□□□ -1.56
CIITA-201ENST00000324288 APCP25054 2843 aa5.31□□□□□ -1.56
CIITA-201ENST00000324288 NBDYA0A0U1RRE5 68 aa5.31□□□□□ -1.56
CIITA-201ENST00000324288 DSPP15924 2871 aaKnown RBP5.31□□□□□ -1.56
CIITA-201ENST00000324288 EIF4EBP3O60516 100 aaPredicted RBP5.3□□□□□ -1.56
CIITA-201ENST00000324288 ERC2-IT1O76042 136 aa5.3□□□□□ -1.56
CIITA-201ENST00000324288 OBSCN-AS1Q96MR7 158 aa5.3□□□□□ -1.56
CIITA-201ENST00000324288 H7BZZ5 65 aa5.3□□□□□ -1.56
CIITA-201ENST00000324288 A0A0C4DFX4 3053 aa5.29□□□□□ -1.56
CIITA-201ENST00000324288 WIPF1O43516 503 aa5.29□□□□□ -1.56
CIITA-201ENST00000324288 LITAFQ99732 161 aa5.28□□□□□ -1.56
CIITA-201ENST00000324288 EP400Q96L91 3159 aa5.28□□□□□ -1.56
CIITA-201ENST00000324288 ANAPC11Q9NYG5 84 aa5.28□□□□□ -1.56
CIITA-201ENST00000324288 DNAH10OSP0CZ25 163 aa5.27□□□□□ -1.57
CIITA-201ENST00000324288 CFAP54Q96N23 3096 aa5.27□□□□□ -1.57
CIITA-201ENST00000324288 MRPL34Q9BQ48 92 aaKnown RBP5.27□□□□□ -1.57
CIITA-201ENST00000324288 C8orf17Q9NRJ1 99 aa5.26□□□□□ -1.57
CIITA-201ENST00000324288 IGSF10Q6WRI0 2623 aa5.26□□□□□ -1.57
CIITA-201ENST00000324288 KRTAP24-1Q3LI83 254 aa5.26□□□□□ -1.57
CIITA-201ENST00000324288 SMR3BP02814 79 aaPredicted RBP5.26□□□□□ -1.57
CIITA-201ENST00000324288 Q8N1X5 172 aa5.26□□□□□ -1.57
CIITA-201ENST00000324288 PRAC1Q96KF2 57 aa5.25□□□□□ -1.57
CIITA-201ENST00000324288 GVQW2A0A096LPI5 108 aaPredicted RBP5.25□□□□□ -1.57
CIITA-201ENST00000324288 IGFL1Q6UW32 110 aa5.25□□□□□ -1.57
CIITA-201ENST00000324288 Q8NAQ8 132 aa5.24□□□□□ -1.57
CIITA-201ENST00000324288 RBM12B-AS1Q9P1G2 102 aa5.24□□□□□ -1.57
CIITA-201ENST00000324288 PRR15Q8IV56 129 aa5.23□□□□□ -1.57
CIITA-201ENST00000324288 DNAH12Q6ZR08 3092 aa5.23□□□□□ -1.57
CIITA-201ENST00000324288 UBR5O95071 2799 aaPredicted RBP5.23□□□□□ -1.57
CIITA-201ENST00000324288 LINC00304Q8N9R0 145 aa5.23□□□□□ -1.57
CIITA-201ENST00000324288 IGLV5-48A0A075B6I7 105 aa5.22□□□□□ -1.57
CIITA-201ENST00000324288 LRBAP50851 2863 aa5.22□□□□□ -1.57
CIITA-201ENST00000324288 C15orf56Q8N910 161 aa5.21□□□□□ -1.57
CIITA-201ENST00000324288 A0A1B0GW54 56 aa5.21□□□□□ -1.58
CIITA-201ENST00000324288 A0A1B0GVX0 72 aa5.2□□□□□ -1.58
CIITA-201ENST00000324288 LUZP6Q538Z0 58 aa5.19□□□□□ -1.58
CIITA-201ENST00000324288 KLKP1Q107X0 134 aa5.19□□□□□ -1.58
CIITA-201ENST00000324288 PRR26Q8N8Z3 221 aa5.19□□□□□ -1.58
CIITA-201ENST00000324288 FAM229BQ4G0N7 80 aa5.19□□□□□ -1.58
CIITA-201ENST00000324288 LINC00528Q8N1L1 170 aa5.19□□□□□ -1.58
CIITA-201ENST00000324288 CDC42SE1Q9NRR8 79 aa5.19□□□□□ -1.58
CIITA-201ENST00000324288 IGLV5-37A0A075B6J1 123 aa5.18□□□□□ -1.58
CIITA-201ENST00000324288 KRTAP10-11P60412 298 aa5.18□□□□□ -1.58
CIITA-201ENST00000324288 ZNF575Q86XF7 245 aa5.18□□□□□ -1.58
CIITA-201ENST00000324288 Q8N377 158 aa5.18□□□□□ -1.58
CIITA-201ENST00000324288 IGLV1-50A0A075B6I6 118 aa5.17□□□□□ -1.58
CIITA-201ENST00000324288 Q1T7F1 81 aa5.17□□□□□ -1.58
CIITA-201ENST00000324288 FAM104AQ969W3 186 aa5.17□□□□□ -1.58
CIITA-201ENST00000324288 H3BNG1 76 aa5.16□□□□□ -1.58
CIITA-201ENST00000324288 CELSR2Q9HCU4 2923 aa5.16□□□□□ -1.58
CIITA-201ENST00000324288 KCNQ1DNQ9H478 68 aa5.16□□□□□ -1.58
CIITA-201ENST00000324288 WWC2-AS2Q96NR7 200 aa5.16□□□□□ -1.58
CIITA-201ENST00000324288 GOLGB1Q14789 3259 aaKnown RBP5.14□□□□□ -1.59
CIITA-201ENST00000324288 CSAG1Q6PB30 78 aa5.14□□□□□ -1.59
CIITA-201ENST00000324288 K7EIL1 84 aa5.13□□□□□ -1.59
CIITA-201ENST00000324288 CHD9Q3L8U1 2897 aa5.13□□□□□ -1.59
CIITA-201ENST00000324288 CASC10Q5T4H9 136 aa5.13□□□□□ -1.59
CIITA-201ENST00000324288 CYSTM1Q9H1C7 97 aa5.12□□□□□ -1.59
CIITA-201ENST00000324288 A0A1W2PNM2 257 aa5.12□□□□□ -1.59
CIITA-201ENST00000324288 ZNF861PO60384 105 aa5.12□□□□□ -1.59
CIITA-201ENST00000324288 C10orf142B7Z368 130 aa5.11□□□□□ -1.59
CIITA-201ENST00000324288 C9orf163Q8N9P6 203 aa5.1□□□□□ -1.59
CIITA-201ENST00000324288 Q5XG85 94 aa5.1□□□□□ -1.59
CIITA-201ENST00000324288 CSNK1G2-AS1Q8NCQ2 148 aa5.1□□□□□ -1.59
CIITA-201ENST00000324288 SPANXA2-OT1Q8N9U9 137 aa5.1□□□□□ -1.59
CIITA-201ENST00000324288 HIVEP1P15822 2718 aa5.09□□□□□ -1.59
CIITA-201ENST00000324288 A0A087WTM6 91 aa5.09□□□□□ -1.59
CIITA-201ENST00000324288 PSORS1C2Q9UIG4 136 aa5.09□□□□□ -1.59
CIITA-201ENST00000324288 OCR1Q9BZK8 76 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms