RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 CASC10Q5T4H9 136 aa14.51□□□□□ -0.09
PNKP-201ENST00000322344 PKD1L1Q8TDX9 2849 aa14.5□□□□□ -0.09
PNKP-201ENST00000322344 PRYO14603 147 aa14.5□□□□□ -0.09
PNKP-201ENST00000322344 CXCL6P80162 114 aa14.49□□□□□ -0.09
PNKP-201ENST00000322344 HAMPP81172 84 aa14.48□□□□□ -0.09
PNKP-201ENST00000322344 DHRS4-AS1Q9P1J3 65 aa14.48□□□□□ -0.09
PNKP-201ENST00000322344 MAST4O15021 2626 aa14.48□□□□□ -0.09
PNKP-201ENST00000322344 IGLV1-50A0A075B6I6 118 aa14.46□□□□□ -0.1
PNKP-201ENST00000322344 LOC107984640A0A0U1RRK4 108 aa14.45□□□□□ -0.1
PNKP-201ENST00000322344 BCE1O60756 84 aa14.45□□□□□ -0.1
PNKP-201ENST00000322344 SPRR1AP35321 89 aa14.44□□□□□ -0.1
PNKP-201ENST00000322344 Q6ZRX8 168 aa14.44□□□□□ -0.1
PNKP-201ENST00000322344 KRTAP4-16G5E9R7 235 aaPredicted RBP14.43□□□□□ -0.1
PNKP-201ENST00000322344 FLNBO75369 2602 aaKnown RBP14.42□□□□□ -0.1
PNKP-201ENST00000322344 FAM168BA1KXE4 195 aa14.42□□□□□ -0.1
PNKP-201ENST00000322344 ETDCA0A1B0GVM5 59 aa14.41□□□□□ -0.1
PNKP-201ENST00000322344 RPL37AP8A6NKH3 93 aa14.41□□□□□ -0.1
PNKP-201ENST00000322344 Q8N377 158 aa14.41□□□□□ -0.1
PNKP-201ENST00000322344 BAHCC1Q9P281 2608 aa14.4□□□□□ -0.1
PNKP-201ENST00000322344 DNAH1Q9P2D7 4330 aa14.4□□□□□ -0.1
PNKP-201ENST00000322344 HUWE1Q7Z6Z7 4374 aaKnown RBP14.4□□□□□ -0.11
PNKP-201ENST00000322344 MRPL55Q7Z7F7 128 aaKnown RBP14.39□□□□□ -0.11
PNKP-201ENST00000322344 KRTAP7-1Q8IUC3 87 aa14.39□□□□□ -0.11
PNKP-201ENST00000322344 DEFB105AQ8NG35 78 aa14.37□□□□□ -0.11
PNKP-201ENST00000322344 IGLV5-48A0A075B6I7 105 aa14.37□□□□□ -0.11
PNKP-201ENST00000322344 Q9BRP9 147 aa14.36□□□□□ -0.11
PNKP-201ENST00000322344 FAM19A5Q7Z5A7 132 aaPredicted RBP14.35□□□□□ -0.11
PNKP-201ENST00000322344 SMIM20Q8N5G0 67 aa14.35□□□□□ -0.11
PNKP-201ENST00000322344 A0A1B0GW54 56 aa14.32□□□□□ -0.12
PNKP-201ENST00000322344 NOTCH1P46531 2555 aa14.32□□□□□ -0.12
PNKP-201ENST00000322344 TRAV7A0A075B6U4 112 aa14.31□□□□□ -0.12
PNKP-201ENST00000322344 TMEM258P61165 79 aa14.3□□□□□ -0.12
PNKP-201ENST00000322344 CNBPP62633 177 aaKnown RBP14.3□□□□□ -0.12
PNKP-201ENST00000322344 NREPQ16612 68 aa14.29□□□□□ -0.12
PNKP-201ENST00000322344 CYSTM1Q9H1C7 97 aa14.29□□□□□ -0.12
PNKP-201ENST00000322344 REG3GQ6UW15 175 aa14.29□□□□□ -0.12
PNKP-201ENST00000322344 SCXQ7RTU7 201 aa14.28□□□□□ -0.12
PNKP-201ENST00000322344 UBE2DNLQ8IWF7 75 aa14.28□□□□□ -0.12
PNKP-201ENST00000322344 KRTAP1-5Q9BYS1 174 aa14.28□□□□□ -0.12
PNKP-201ENST00000322344 C16orf90A8MZG2 172 aa14.27□□□□□ -0.13
PNKP-201ENST00000322344 TNP2Q05952 138 aa14.27□□□□□ -0.13
PNKP-201ENST00000322344 APLNQ9ULZ1 77 aa14.27□□□□□ -0.13
PNKP-201ENST00000322344 PSCAO43653 123 aa14.26□□□□□ -0.13
PNKP-201ENST00000322344 FUSP35637 526 aaKnown RBP eCLIP14.26□□□□□ -0.13
PNKP-201ENST00000322344 UBE2BP63146 152 aa14.25□□□□□ -0.13
PNKP-201ENST00000322344 ST20-AS1Q8NBB2 130 aa14.25□□□□□ -0.13
PNKP-201ENST00000322344 C14orf177Q52M58 125 aa14.24□□□□□ -0.13
PNKP-201ENST00000322344 COL6A5A8TX70 2615 aa14.24□□□□□ -0.13
PNKP-201ENST00000322344 A0A096LNI7 61 aa14.22□□□□□ -0.13
PNKP-201ENST00000322344 C3orf84H3BNL1 204 aa14.22□□□□□ -0.13
PNKP-201ENST00000322344 C1orf137Q5JT78 98 aa14.22□□□□□ -0.13
PNKP-201ENST00000322344 ERC2-IT1O76042 136 aa14.21□□□□□ -0.13
PNKP-201ENST00000322344 BPY2O14599 106 aa14.2□□□□□ -0.14
PNKP-201ENST00000322344 NBEAL1Q6ZS30 2694 aa14.2□□□□□ -0.14
PNKP-201ENST00000322344 A0A1W2PNM2 257 aa14.19□□□□□ -0.14
PNKP-201ENST00000322344 C20orf197Q8N268 126 aa14.19□□□□□ -0.14
PNKP-201ENST00000322344 B9D2Q9BPU9 175 aa14.19□□□□□ -0.14
PNKP-201ENST00000322344 Q8NBF4 154 aa14.19□□□□□ -0.14
PNKP-201ENST00000322344 J3KT08 172 aa14.18□□□□□ -0.14
PNKP-201ENST00000322344 IGKV4-1P06312 121 aa14.17□□□□□ -0.14
PNKP-201ENST00000322344 RPS28P62857 69 aaKnown RBP14.17□□□□□ -0.14
PNKP-201ENST00000322344 IGKV2-24A0A0C4DH68 120 aa14.17□□□□□ -0.14
PNKP-201ENST00000322344 SPRR4Q96PI1 79 aa14.15□□□□□ -0.14
PNKP-201ENST00000322344 A0A1W2PNN7 141 aa14.15□□□□□ -0.14
PNKP-201ENST00000322344 PKIGQ9Y2B9 76 aa14.14□□□□□ -0.15
PNKP-201ENST00000322344 SMIM29Q86T20 159 aa14.12□□□□□ -0.15
PNKP-201ENST00000322344 F8WEM9 126 aa14.12□□□□□ -0.15
PNKP-201ENST00000322344 KLKP1Q107X0 134 aa14.12□□□□□ -0.15
PNKP-201ENST00000322344 Q8N9L7 120 aa14.11□□□□□ -0.15
PNKP-201ENST00000322344 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.1□□□□□ -0.15
PNKP-201ENST00000322344 DPH3Q96FX2 82 aa14.1□□□□□ -0.15
PNKP-201ENST00000322344 DNAH9Q9NYC9 4486 aa14.08□□□□□ -0.16
PNKP-201ENST00000322344 NUPR2A6NF83 97 aa14.07□□□□□ -0.16
PNKP-201ENST00000322344 DYNC2H1Q8NCM8 4307 aaKnown RBP14.06□□□□□ -0.16
PNKP-201ENST00000322344 PRLHP81277 87 aa14.06□□□□□ -0.16
PNKP-201ENST00000322344 LINC00476Q8WZB0 136 aa14.06□□□□□ -0.16
PNKP-201ENST00000322344 C9orf163Q8N9P6 203 aa14.05□□□□□ -0.16
PNKP-201ENST00000322344 NBDYA0A0U1RRE5 68 aa14.05□□□□□ -0.16
PNKP-201ENST00000322344 MDFIQ99750 246 aa14.05□□□□□ -0.16
PNKP-201ENST00000322344 MGAM2Q2M2H8 2515 aa14.04□□□□□ -0.16
PNKP-201ENST00000322344 IGLV8-61A0A075B6I0 122 aa14.03□□□□□ -0.16
PNKP-201ENST00000322344 LRCOL1A6NCL2 159 aa14.03□□□□□ -0.16
PNKP-201ENST00000322344 H7BZZ5 65 aa14.03□□□□□ -0.16
PNKP-201ENST00000322344 H0Y9J4 135 aa14.03□□□□□ -0.16
PNKP-201ENST00000322344 HIGD2AQ9BW72 106 aa14.02□□□□□ -0.16
PNKP-201ENST00000322344 PHF5AQ7RTV0 110 aaKnown RBP14.01□□□□□ -0.17
PNKP-201ENST00000322344 LINC00474Q9P2X8 69 aa14.01□□□□□ -0.17
PNKP-201ENST00000322344 FAM236DA0A1B0GTK5 79 aa14□□□□□ -0.17
PNKP-201ENST00000322344 NDUFC1O43677 76 aa14□□□□□ -0.17
PNKP-201ENST00000322344 CHTF8P0CG12 524 aa14□□□□□ -0.17
PNKP-201ENST00000322344 FAM236CP0DP71 79 aa14□□□□□ -0.17
PNKP-201ENST00000322344 IGFL1Q6UW32 110 aa14□□□□□ -0.17
PNKP-201ENST00000322344 OCR1Q9BZK8 76 aa13.99□□□□□ -0.17
PNKP-201ENST00000322344 SNURFQ9Y675 71 aa13.99□□□□□ -0.17
PNKP-201ENST00000322344 DNAH10Q8IVF4 4471 aa13.98□□□□□ -0.17
PNKP-201ENST00000322344 Q6ZRN7 208 aaPredicted RBP13.97□□□□□ -0.17
PNKP-201ENST00000322344 STAB2Q8WWQ8 2551 aa13.96□□□□□ -0.17
PNKP-201ENST00000322344 EPM2AB3EWF7 344 aa13.95□□□□□ -0.18
PNKP-201ENST00000322344 SPRR1BP22528 89 aa13.95□□□□□ -0.18
PNKP-201ENST00000322344 UBE2AP49459 152 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms