RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 LINC00588Q9Y4M8 146 aa9.78□□□□□ -0.84
CHFR-202ENST00000315585 NOTCH1P46531 2555 aa9.78□□□□□ -0.84
CHFR-202ENST00000315585 UPK3BQ9BT76 320 aa9.78□□□□□ -0.84
CHFR-202ENST00000315585 Q6ZVQ6 151 aa9.76□□□□□ -0.85
CHFR-202ENST00000315585 SMIM20Q8N5G0 67 aa9.76□□□□□ -0.85
CHFR-202ENST00000315585 TENM3Q9P273 2699 aa9.75□□□□□ -0.85
CHFR-202ENST00000315585 LINC01547P58512 204 aaPredicted RBP9.75□□□□□ -0.85
CHFR-202ENST00000315585 HAMPP81172 84 aa9.75□□□□□ -0.85
CHFR-202ENST00000315585 DHRS4-AS1Q9P1J3 65 aa9.75□□□□□ -0.85
CHFR-202ENST00000315585 IGLV5-37A0A075B6J1 123 aa9.73□□□□□ -0.85
CHFR-202ENST00000315585 FAM19A1Q7Z5A9 133 aa9.73□□□□□ -0.85
CHFR-202ENST00000315585 MGAM2Q2M2H8 2515 aa9.72□□□□□ -0.85
CHFR-202ENST00000315585 PRYO14603 147 aa9.72□□□□□ -0.85
CHFR-202ENST00000315585 NBEAL1Q6ZS30 2694 aa9.72□□□□□ -0.85
CHFR-202ENST00000315585 C7orf33Q8WU49 177 aa9.72□□□□□ -0.85
CHFR-202ENST00000315585 A0A1B0GW54 56 aa9.71□□□□□ -0.85
CHFR-202ENST00000315585 TMEM258P61165 79 aa9.69□□□□□ -0.86
CHFR-202ENST00000315585 SERTAD4-AS1Q5TG53 156 aa9.68□□□□□ -0.86
CHFR-202ENST00000315585 LOC107984640A0A0U1RRK4 108 aa9.68□□□□□ -0.86
CHFR-202ENST00000315585 ETDCA0A1B0GVM5 59 aa9.67□□□□□ -0.86
CHFR-202ENST00000315585 NUPR2A6NF83 97 aa9.67□□□□□ -0.86
CHFR-202ENST00000315585 M0R2N4 97 aa9.67□□□□□ -0.86
CHFR-202ENST00000315585 Q6ZRX8 168 aa9.67□□□□□ -0.86
CHFR-202ENST00000315585 UBE2DNLQ8IWF7 75 aa9.67□□□□□ -0.86
CHFR-202ENST00000315585 IGLV1-50A0A075B6I6 118 aa9.67□□□□□ -0.86
CHFR-202ENST00000315585 APLNQ9ULZ1 77 aa9.67□□□□□ -0.86
CHFR-202ENST00000315585 TRAV7A0A075B6U4 112 aa9.65□□□□□ -0.86
CHFR-202ENST00000315585 SPRR1AP35321 89 aa9.65□□□□□ -0.86
CHFR-202ENST00000315585 IGLV5-48A0A075B6I7 105 aa9.65□□□□□ -0.86
CHFR-202ENST00000315585 RPS28P62857 69 aaKnown RBP9.64□□□□□ -0.87
CHFR-202ENST00000315585 NREPQ16612 68 aa9.64□□□□□ -0.87
CHFR-202ENST00000315585 MRPL55Q7Z7F7 128 aaKnown RBP9.64□□□□□ -0.87
CHFR-202ENST00000315585 FUSP35637 526 aaKnown RBP eCLIP9.63□□□□□ -0.87
CHFR-202ENST00000315585 Q8N377 158 aa9.63□□□□□ -0.87
CHFR-202ENST00000315585 HUWE1Q7Z6Z7 4374 aaKnown RBP9.62□□□□□ -0.87
CHFR-202ENST00000315585 KRTAP4-16G5E9R7 235 aaPredicted RBP9.62□□□□□ -0.87
CHFR-202ENST00000315585 DEFB105AQ8NG35 78 aa9.62□□□□□ -0.87
CHFR-202ENST00000315585 J3KT08 172 aa9.62□□□□□ -0.87
CHFR-202ENST00000315585 KRTAP21-3Q3LHN1 58 aa9.62□□□□□ -0.87
CHFR-202ENST00000315585 RPL37AP8A6NKH3 93 aa9.61□□□□□ -0.87
CHFR-202ENST00000315585 CASC10Q5T4H9 136 aa9.58□□□□□ -0.88
CHFR-202ENST00000315585 C14orf177Q52M58 125 aa9.58□□□□□ -0.88
CHFR-202ENST00000315585 FAM168BA1KXE4 195 aa9.57□□□□□ -0.88
CHFR-202ENST00000315585 REG3GQ6UW15 175 aa9.57□□□□□ -0.88
CHFR-202ENST00000315585 BPY2O14599 106 aa9.57□□□□□ -0.88
CHFR-202ENST00000315585 FAM19A5Q7Z5A7 132 aaPredicted RBP9.57□□□□□ -0.88
CHFR-202ENST00000315585 Q9BRP9 147 aa9.57□□□□□ -0.88
CHFR-202ENST00000315585 PKIGQ9Y2B9 76 aa9.57□□□□□ -0.88
CHFR-202ENST00000315585 C20orf197Q8N268 126 aa9.56□□□□□ -0.88
CHFR-202ENST00000315585 PSCAO43653 123 aa9.56□□□□□ -0.88
CHFR-202ENST00000315585 CNBPP62633 177 aaKnown RBP9.56□□□□□ -0.88
CHFR-202ENST00000315585 UBE2BP63146 152 aa9.56□□□□□ -0.88
CHFR-202ENST00000315585 C16orf90A8MZG2 172 aa9.55□□□□□ -0.88
CHFR-202ENST00000315585 C1orf137Q5JT78 98 aa9.54□□□□□ -0.88
CHFR-202ENST00000315585 KLKP1Q107X0 134 aa9.54□□□□□ -0.88
CHFR-202ENST00000315585 SCXQ7RTU7 201 aa9.53□□□□□ -0.88
CHFR-202ENST00000315585 F8WEM9 126 aa9.53□□□□□ -0.88
CHFR-202ENST00000315585 NDUFC1O43677 76 aa9.53□□□□□ -0.88
CHFR-202ENST00000315585 TNP2Q05952 138 aa9.53□□□□□ -0.88
CHFR-202ENST00000315585 CYSTM1Q9H1C7 97 aa9.53□□□□□ -0.88
CHFR-202ENST00000315585 KRTAP7-1Q8IUC3 87 aa9.52□□□□□ -0.89
CHFR-202ENST00000315585 DPH3Q96FX2 82 aa9.52□□□□□ -0.89
CHFR-202ENST00000315585 C3orf84H3BNL1 204 aa9.52□□□□□ -0.89
CHFR-202ENST00000315585 Q8NBF4 154 aa9.52□□□□□ -0.89
CHFR-202ENST00000315585 ERC2-IT1O76042 136 aa9.51□□□□□ -0.89
CHFR-202ENST00000315585 KRTAP1-5Q9BYS1 174 aa9.51□□□□□ -0.89
CHFR-202ENST00000315585 SPRR4Q96PI1 79 aa9.5□□□□□ -0.89
CHFR-202ENST00000315585 NBDYA0A0U1RRE5 68 aa9.5□□□□□ -0.89
CHFR-202ENST00000315585 DNAH9Q9NYC9 4486 aa9.49□□□□□ -0.89
CHFR-202ENST00000315585 SVIPQ8NHG7 77 aa9.49□□□□□ -0.89
CHFR-202ENST00000315585 IGKV4-1P06312 121 aa9.48□□□□□ -0.89
CHFR-202ENST00000315585 ST20-AS1Q8NBB2 130 aa9.48□□□□□ -0.89
CHFR-202ENST00000315585 STAB2Q8WWQ8 2551 aa9.48□□□□□ -0.89
CHFR-202ENST00000315585 A0A1W2PNM2 257 aa9.47□□□□□ -0.89
CHFR-202ENST00000315585 A0A096LNI7 61 aa9.46□□□□□ -0.9
CHFR-202ENST00000315585 FAM236DA0A1B0GTK5 79 aa9.45□□□□□ -0.9
CHFR-202ENST00000315585 FAM236CP0DP71 79 aa9.45□□□□□ -0.9
CHFR-202ENST00000315585 COL7A1Q02388 2944 aa9.45□□□□□ -0.9
CHFR-202ENST00000315585 IGKV2-24A0A0C4DH68 120 aa9.44□□□□□ -0.9
CHFR-202ENST00000315585 H7BZZ5 65 aa9.44□□□□□ -0.9
CHFR-202ENST00000315585 LINC00474Q9P2X8 69 aa9.44□□□□□ -0.9
CHFR-202ENST00000315585 ATP5EP56381 51 aaPredicted RBP9.43□□□□□ -0.9
CHFR-202ENST00000315585 H0Y9J4 135 aa9.42□□□□□ -0.9
CHFR-202ENST00000315585 Q8N9L7 120 aa9.42□□□□□ -0.9
CHFR-202ENST00000315585 SMIM29Q86T20 159 aa9.41□□□□□ -0.9
CHFR-202ENST00000315585 IGLV8-61A0A075B6I0 122 aa9.41□□□□□ -0.9
CHFR-202ENST00000315585 A0A1W2PNN7 141 aa9.41□□□□□ -0.9
CHFR-202ENST00000315585 TMEM254Q8TBM7 123 aa9.41□□□□□ -0.9
CHFR-202ENST00000315585 LINC00476Q8WZB0 136 aa9.41□□□□□ -0.9
CHFR-202ENST00000315585 OCR1Q9BZK8 76 aa9.4□□□□□ -0.91
CHFR-202ENST00000315585 SNURFQ9Y675 71 aa9.39□□□□□ -0.91
CHFR-202ENST00000315585 C9orf163Q8N9P6 203 aa9.39□□□□□ -0.91
CHFR-202ENST00000315585 HIGD2AQ9BW72 106 aa9.39□□□□□ -0.91
CHFR-202ENST00000315585 SERP1Q9Y6X1 66 aa9.39□□□□□ -0.91
CHFR-202ENST00000315585 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.38□□□□□ -0.91
CHFR-202ENST00000315585 PRLHP81277 87 aa9.37□□□□□ -0.91
CHFR-202ENST00000315585 LRCOL1A6NCL2 159 aa9.36□□□□□ -0.91
CHFR-202ENST00000315585 UBE2AP49459 152 aa9.36□□□□□ -0.91
CHFR-202ENST00000315585 Q6ZRN7 208 aaPredicted RBP9.36□□□□□ -0.91
CHFR-202ENST00000315585 DYNC2H1Q8NCM8 4307 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms