RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 CFC1P0CG37 223 aa7.75□□□□□ -1.17
CHMP2A-201ENST00000312547 TRAV23DV6A0A075B6W5 121 aa7.74□□□□□ -1.17
CHMP2A-201ENST00000312547 TMEM238LA0A1B0GVL6 79 aa7.74□□□□□ -1.17
CHMP2A-201ENST00000312547 A6NDN8 102 aa7.74□□□□□ -1.17
CHMP2A-201ENST00000312547 A6NJY4 79 aa7.74□□□□□ -1.17
CHMP2A-201ENST00000312547 CTAG1AP78358 180 aa7.74□□□□□ -1.17
CHMP2A-201ENST00000312547 KRTAP13-1Q8IUC0 172 aa7.74□□□□□ -1.17
CHMP2A-201ENST00000312547 A0A0B4J2C4 111 aa7.73□□□□□ -1.17
CHMP2A-201ENST00000312547 CBY1Q9Y3M2 126 aa7.73□□□□□ -1.17
CHMP2A-201ENST00000312547 DMBT1Q9UGM3 2413 aaPredicted RBP7.73□□□□□ -1.17
CHMP2A-201ENST00000312547 A0A1B0GWB2 263 aa7.72□□□□□ -1.17
CHMP2A-201ENST00000312547 ZNF73O43830 326 aaPredicted RBP7.72□□□□□ -1.17
CHMP2A-201ENST00000312547 BVES-AS1Q5T3Y7 98 aa7.72□□□□□ -1.17
CHMP2A-201ENST00000312547 SRRM2Q9UQ35 2752 aaKnown RBP7.72□□□□□ -1.17
CHMP2A-201ENST00000312547 ZNF861PO60384 105 aa7.71□□□□□ -1.18
CHMP2A-201ENST00000312547 H0Y9J4 135 aa7.7□□□□□ -1.18
CHMP2A-201ENST00000312547 RPL13AP40429 203 aaKnown RBP7.7□□□□□ -1.18
CHMP2A-201ENST00000312547 FAM19A1Q7Z5A9 133 aa7.7□□□□□ -1.18
CHMP2A-201ENST00000312547 SMIM11BQ8TCY0 68 aa7.7□□□□□ -1.18
CHMP2A-201ENST00000312547 ETDCA0A1B0GVM5 59 aa7.69□□□□□ -1.18
CHMP2A-201ENST00000312547 B5MCH6 92 aa7.69□□□□□ -1.18
CHMP2A-201ENST00000312547 M0R143 59 aa7.69□□□□□ -1.18
CHMP2A-201ENST00000312547 RPL28P46779 137 aaKnown RBP7.69□□□□□ -1.18
CHMP2A-201ENST00000312547 PRLHP81277 87 aa7.69□□□□□ -1.18
CHMP2A-201ENST00000312547 DIRC1Q969H9 104 aa7.69□□□□□ -1.18
CHMP2A-201ENST00000312547 RAB37Q96AX2 223 aa7.69□□□□□ -1.18
CHMP2A-201ENST00000312547 NHP2Q9NX24 153 aaKnown RBP7.69□□□□□ -1.18
CHMP2A-201ENST00000312547 PKHD1L1Q86WI1 4243 aa7.69□□□□□ -1.18
CHMP2A-201ENST00000312547 UBE2AP49459 152 aa7.68□□□□□ -1.18
CHMP2A-201ENST00000312547 HINT1P49773 126 aaPredicted RBP7.68□□□□□ -1.18
CHMP2A-201ENST00000312547 C6orf99Q4VX62 202 aa7.68□□□□□ -1.18
CHMP2A-201ENST00000312547 SPINK6Q6UWN8 80 aa7.68□□□□□ -1.18
CHMP2A-201ENST00000312547 PRO1854Q9UHT4 67 aa7.68□□□□□ -1.18
CHMP2A-201ENST00000312547 TRBV7-6A0A0J9YX20 115 aa7.67□□□□□ -1.18
CHMP2A-201ENST00000312547 K7ERJ3 54 aa7.67□□□□□ -1.18
CHMP2A-201ENST00000312547 Q6ZRX8 168 aa7.67□□□□□ -1.18
CHMP2A-201ENST00000312547 ELOF1P60002 83 aaKnown RBP7.65□□□□□ -1.18
CHMP2A-201ENST00000312547 SMCR5Q8TEV8 140 aa7.65□□□□□ -1.18
CHMP2A-201ENST00000312547 H7C2G1 150 aa7.64□□□□□ -1.19
CHMP2A-201ENST00000312547 INAFM2P0DMQ5 153 aa7.64□□□□□ -1.19
CHMP2A-201ENST00000312547 COX7BP24311 80 aa7.64□□□□□ -1.19
CHMP2A-201ENST00000312547 Q9BRP9 147 aa7.64□□□□□ -1.19
CHMP2A-201ENST00000312547 FLG2Q5D862 2391 aaPredicted RBP7.63□□□□□ -1.19
CHMP2A-201ENST00000312547 HIGD2AQ9BW72 106 aa7.62□□□□□ -1.19
CHMP2A-201ENST00000312547 ERC2-IT1O76042 136 aa7.61□□□□□ -1.19
CHMP2A-201ENST00000312547 TSPAN13O95857 204 aa7.61□□□□□ -1.19
CHMP2A-201ENST00000312547 VAMP3Q15836 100 aa7.6□□□□□ -1.19
CHMP2A-201ENST00000312547 Q1RN00 199 aa7.6□□□□□ -1.19
CHMP2A-201ENST00000312547 DHRS4-AS1Q9P1J3 65 aa7.6□□□□□ -1.19
CHMP2A-201ENST00000312547 KRTAP1-4P0C5Y4 121 aa7.59□□□□□ -1.19
CHMP2A-201ENST00000312547 BATFQ16520 125 aa7.59□□□□□ -1.19
CHMP2A-201ENST00000312547 TRIAP1O43715 76 aa7.58□□□□□ -1.2
CHMP2A-201ENST00000312547 LINC00575Q6W349 94 aa7.58□□□□□ -1.2
CHMP2A-201ENST00000312547 SNHG12Q9BXW3 62 aa7.58□□□□□ -1.2
CHMP2A-201ENST00000312547 FAT3Q8TDW7 4589 aa7.57□□□□□ -1.2
CHMP2A-201ENST00000312547 PCP4L1A6NKN8 68 aa7.57□□□□□ -1.2
CHMP2A-201ENST00000312547 H0YGX0 51 aa7.57□□□□□ -1.2
CHMP2A-201ENST00000312547 SPRR4Q96PI1 79 aa7.57□□□□□ -1.2
CHMP2A-201ENST00000312547 LRP1Q07954 4544 aaKnown RBP7.56□□□□□ -1.2
CHMP2A-201ENST00000312547 ST20-AS1Q8NBB2 130 aa7.55□□□□□ -1.2
CHMP2A-201ENST00000312547 FAM218AQ96MZ4 157 aa7.55□□□□□ -1.2
CHMP2A-201ENST00000312547 ZNF706Q9Y5V0 76 aaPredicted RBP7.55□□□□□ -1.2
CHMP2A-201ENST00000312547 PSMB2P49721 201 aa7.54□□□□□ -1.2
CHMP2A-201ENST00000312547 LINC00483Q53H64 154 aa7.54□□□□□ -1.2
CHMP2A-201ENST00000312547 LINC01600Q96MT4 127 aa7.54□□□□□ -1.2
CHMP2A-201ENST00000312547 HMCN2Q8NDA2 5059 aa7.54□□□□□ -1.2
CHMP2A-201ENST00000312547 hADV29S1A0JD25 119 aa7.53□□□□□ -1.2
CHMP2A-201ENST00000312547 SLC25A20O43772 301 aa7.53□□□□□ -1.2
CHMP2A-201ENST00000312547 OXTP01178 125 aa7.53□□□□□ -1.2
CHMP2A-201ENST00000312547 ANAPC11Q9NYG5 84 aa7.53□□□□□ -1.2
CHMP2A-201ENST00000312547 KRTAP29-1A8MX34 341 aaPredicted RBP7.52□□□□□ -1.21
CHMP2A-201ENST00000312547 TAX1BP3O14907 124 aa7.52□□□□□ -1.21
CHMP2A-201ENST00000312547 COX6CP09669 75 aa7.52□□□□□ -1.21
CHMP2A-201ENST00000312547 SPRR1BP22528 89 aa7.52□□□□□ -1.21
CHMP2A-201ENST00000312547 FAM229BQ4G0N7 80 aa7.52□□□□□ -1.21
CHMP2A-201ENST00000312547 UBR4Q5T4S7 5183 aa7.52□□□□□ -1.21
CHMP2A-201ENST00000312547 IGLV5-48A0A075B6I7 105 aa7.51□□□□□ -1.21
CHMP2A-201ENST00000312547 A0A1B0GX51 115 aa7.51□□□□□ -1.21
CHMP2A-201ENST00000312547 LINC01547P58512 204 aaPredicted RBP7.51□□□□□ -1.21
CHMP2A-201ENST00000312547 GAGE2AQ6NT46 116 aa7.51□□□□□ -1.21
CHMP2A-201ENST00000312547 CLEC2BQ92478 149 aa7.51□□□□□ -1.21
CHMP2A-201ENST00000312547 NAA38Q9BRA0 125 aaKnown RBP7.51□□□□□ -1.21
CHMP2A-201ENST00000312547 A0A087X002 238 aa7.5□□□□□ -1.21
CHMP2A-201ENST00000312547 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.5□□□□□ -1.21
CHMP2A-201ENST00000312547 C9orf118A6NHY6 69 aa7.49□□□□□ -1.21
CHMP2A-201ENST00000312547 MT1HL1P0DM35 61 aa7.49□□□□□ -1.21
CHMP2A-201ENST00000312547 KRTAP10-8P60410 259 aa7.49□□□□□ -1.21
CHMP2A-201ENST00000312547 COL5A1-AS1Q5SY13 56 aa7.49□□□□□ -1.21
CHMP2A-201ENST00000312547 Q6ZQY7 126 aa7.49□□□□□ -1.21
CHMP2A-201ENST00000312547 PRR26Q8N8Z3 221 aa7.49□□□□□ -1.21
CHMP2A-201ENST00000312547 H3BUT2 72 aa7.48□□□□□ -1.21
CHMP2A-201ENST00000312547 SCGB1C2P0DMR2 95 aa7.48□□□□□ -1.21
CHMP2A-201ENST00000312547 CRYGAP11844 174 aa7.48□□□□□ -1.21
CHMP2A-201ENST00000312547 KRTAP13-2Q52LG2 175 aa7.48□□□□□ -1.21
CHMP2A-201ENST00000312547 TEX49A0A1B0GTD5 131 aa7.47□□□□□ -1.21
CHMP2A-201ENST00000312547 LST1O00453 97 aa7.47□□□□□ -1.21
CHMP2A-201ENST00000312547 SNCGO76070 127 aa7.47□□□□□ -1.21
CHMP2A-201ENST00000312547 Q8N377 158 aa7.47□□□□□ -1.21
CHMP2A-201ENST00000312547 TNXBP22105 4242 aa7.47□□□□□ -1.21
CHMP2A-201ENST00000312547 SMIM29Q86T20 159 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 222 ms