RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 UNC79Q9P2D8 2635 aa5.55□□□□□ -1.52
VPS41-202ENST00000310301 SPACA4Q8TDM5 124 aa5.55□□□□□ -1.52
VPS41-202ENST00000310301 LOC101927531A0A1B0GV80 90 aa5.54□□□□□ -1.52
VPS41-202ENST00000310301 K7EQZ3 153 aa5.54□□□□□ -1.52
VPS41-202ENST00000310301 Q8NAQ8 132 aa5.54□□□□□ -1.52
VPS41-202ENST00000310301 KLKP1Q107X0 134 aa5.54□□□□□ -1.52
VPS41-202ENST00000310301 IGSF10Q6WRI0 2623 aa5.54□□□□□ -1.52
VPS41-202ENST00000310301 UQCR11O14957 56 aa5.53□□□□□ -1.52
VPS41-202ENST00000310301 LCA10Q71F78 164 aa5.53□□□□□ -1.52
VPS41-202ENST00000310301 LINC00313P59037 77 aa5.53□□□□□ -1.52
VPS41-202ENST00000310301 MAST4O15021 2626 aa5.53□□□□□ -1.52
VPS41-202ENST00000310301 H7BZZ5 65 aa5.52□□□□□ -1.53
VPS41-202ENST00000310301 MIR22HGQ0VDD5 57 aa5.51□□□□□ -1.53
VPS41-202ENST00000310301 MUC4Q99102 2169 aa5.51□□□□□ -1.53
VPS41-202ENST00000310301 J3QL48 77 aa5.51□□□□□ -1.53
VPS41-202ENST00000310301 RANBP2P49792 3224 aaKnown RBP5.51□□□□□ -1.53
VPS41-202ENST00000310301 DNAH12Q6ZR08 3092 aa5.51□□□□□ -1.53
VPS41-202ENST00000310301 A8MWP4 228 aa5.5□□□□□ -1.53
VPS41-202ENST00000310301 WIPF1O43516 503 aa5.5□□□□□ -1.53
VPS41-202ENST00000310301 PHF5AQ7RTV0 110 aaKnown RBP5.5□□□□□ -1.53
VPS41-202ENST00000310301 EPM2AB3EWF7 344 aa5.49□□□□□ -1.53
VPS41-202ENST00000310301 GCN1Q92616 2671 aaKnown RBP5.49□□□□□ -1.53
VPS41-202ENST00000310301 TEP1Q99973 2627 aaKnown RBP5.49□□□□□ -1.53
VPS41-202ENST00000310301 IGLV6-57P01721 117 aa5.48□□□□□ -1.53
VPS41-202ENST00000310301 MRPL34Q9BQ48 92 aaKnown RBP5.47□□□□□ -1.53
VPS41-202ENST00000310301 CRIPTQ9P021 101 aa5.47□□□□□ -1.53
VPS41-202ENST00000310301 PRR15Q8IV56 129 aa5.46□□□□□ -1.53
VPS41-202ENST00000310301 CASC10Q5T4H9 136 aa5.46□□□□□ -1.54
VPS41-202ENST00000310301 LINC00588Q9Y4M8 146 aa5.46□□□□□ -1.54
VPS41-202ENST00000310301 EIF4EBP3O60516 100 aaPredicted RBP5.46□□□□□ -1.54
VPS41-202ENST00000310301 CHTF8P0CG12 524 aa5.46□□□□□ -1.54
VPS41-202ENST00000310301 Q96NJ1 140 aa5.45□□□□□ -1.54
VPS41-202ENST00000310301 Q6ZRP5 223 aa5.45□□□□□ -1.54
VPS41-202ENST00000310301 APLNQ9ULZ1 77 aa5.45□□□□□ -1.54
VPS41-202ENST00000310301 RTL8CO15255 209 aa5.44□□□□□ -1.54
VPS41-202ENST00000310301 GVQW2A0A096LPI5 108 aaPredicted RBP5.44□□□□□ -1.54
VPS41-202ENST00000310301 FAM168BA1KXE4 195 aa5.43□□□□□ -1.54
VPS41-202ENST00000310301 DNAH10OSP0CZ25 163 aa5.42□□□□□ -1.54
VPS41-202ENST00000310301 CENPEQ02224 2701 aa5.42□□□□□ -1.54
VPS41-202ENST00000310301 STAB1Q9NY15 2570 aa5.42□□□□□ -1.54
VPS41-202ENST00000310301 CDC42SE1Q9NRR8 79 aa5.42□□□□□ -1.54
VPS41-202ENST00000310301 IGFL1Q6UW32 110 aa5.41□□□□□ -1.54
VPS41-202ENST00000310301 C8orf17Q9NRJ1 99 aa5.41□□□□□ -1.54
VPS41-202ENST00000310301 LINC00528Q8N1L1 170 aa5.41□□□□□ -1.54
VPS41-202ENST00000310301 C9orf129Q5T035 196 aaKnown RBP5.4□□□□□ -1.54
VPS41-202ENST00000310301 CSNK1G2-AS1Q8NCQ2 148 aa5.4□□□□□ -1.54
VPS41-202ENST00000310301 CR1P17927 2039 aa5.4□□□□□ -1.55
VPS41-202ENST00000310301 IGLV1-50A0A075B6I6 118 aa5.39□□□□□ -1.55
VPS41-202ENST00000310301 TYMSOSQ8TAI1 123 aa5.39□□□□□ -1.55
VPS41-202ENST00000310301 COL6A5A8TX70 2615 aa5.39□□□□□ -1.55
VPS41-202ENST00000310301 LCE6AA0A183 80 aa5.39□□□□□ -1.55
VPS41-202ENST00000310301 KCNQ1DNQ9H478 68 aa5.39□□□□□ -1.55
VPS41-202ENST00000310301 TNRC18O15417 2968 aaPredicted RBP5.39□□□□□ -1.55
VPS41-202ENST00000310301 DSCR10P59022 87 aa5.39□□□□□ -1.55
VPS41-202ENST00000310301 PCNTO95613 3336 aa5.39□□□□□ -1.55
VPS41-202ENST00000310301 Q8N377 158 aa5.38□□□□□ -1.55
VPS41-202ENST00000310301 RBM12B-AS1Q9P1G2 102 aa5.37□□□□□ -1.55
VPS41-202ENST00000310301 A0A0G2JQZ4 141 aa5.37□□□□□ -1.55
VPS41-202ENST00000310301 A0A1W2PNN7 141 aa5.37□□□□□ -1.55
VPS41-202ENST00000310301 PRRC2CQ9Y520 2896 aaKnown RBP5.37□□□□□ -1.55
VPS41-202ENST00000310301 Q1T7F1 81 aa5.37□□□□□ -1.55
VPS41-202ENST00000310301 A0A1B0GVX0 72 aa5.36□□□□□ -1.55
VPS41-202ENST00000310301 SPANXA2-OT1Q8N9U9 137 aa5.36□□□□□ -1.55
VPS41-202ENST00000310301 AKAP13Q12802 2813 aa5.36□□□□□ -1.55
VPS41-202ENST00000310301 H3BS24 57 aa5.35□□□□□ -1.55
VPS41-202ENST00000310301 DSPP15924 2871 aaKnown RBP5.35□□□□□ -1.55
VPS41-202ENST00000310301 A0A087WTM6 91 aa5.34□□□□□ -1.55
VPS41-202ENST00000310301 LINC00612Q8N6U2 182 aa5.33□□□□□ -1.56
VPS41-202ENST00000310301 OBSCN-AS1Q96MR7 158 aa5.33□□□□□ -1.56
VPS41-202ENST00000310301 Q5XG85 94 aa5.32□□□□□ -1.56
VPS41-202ENST00000310301 A0A0D9SG42 100 aa5.31□□□□□ -1.56
VPS41-202ENST00000310301 FAM104AQ969W3 186 aa5.31□□□□□ -1.56
VPS41-202ENST00000310301 LAMA3Q16787 3333 aa5.31□□□□□ -1.56
VPS41-202ENST00000310301 GIG44P09565 113 aaPredicted RBP5.31□□□□□ -1.56
VPS41-202ENST00000310301 A0A1W2PNM2 257 aa5.3□□□□□ -1.56
VPS41-202ENST00000310301 OCR1Q9BZK8 76 aa5.29□□□□□ -1.56
VPS41-202ENST00000310301 ZNF575Q86XF7 245 aa5.29□□□□□ -1.56
VPS41-202ENST00000310301 C15orf56Q8N910 161 aa5.29□□□□□ -1.56
VPS41-202ENST00000310301 FAM229BQ4G0N7 80 aa5.28□□□□□ -1.56
VPS41-202ENST00000310301 LINC01554Q52M75 96 aa5.28□□□□□ -1.56
VPS41-202ENST00000310301 LUZP6Q538Z0 58 aa5.28□□□□□ -1.56
VPS41-202ENST00000310301 C9orf163Q8N9P6 203 aa5.28□□□□□ -1.56
VPS41-202ENST00000310301 Q75L30 129 aa5.27□□□□□ -1.57
VPS41-202ENST00000310301 PRR26Q8N8Z3 221 aa5.27□□□□□ -1.57
VPS41-202ENST00000310301 MKI67P46013 3256 aaKnown RBP5.27□□□□□ -1.57
VPS41-202ENST00000310301 C9orf92A6NGG3 77 aa5.27□□□□□ -1.57
VPS41-202ENST00000310301 Q8N1X5 172 aa5.26□□□□□ -1.57
VPS41-202ENST00000310301 PRR34Q9NV39 138 aa5.26□□□□□ -1.57
VPS41-202ENST00000310301 C5orf42Q9H799 3197 aa5.26□□□□□ -1.57
VPS41-202ENST00000310301 MGAQ8IWI9 3026 aa5.26□□□□□ -1.57
VPS41-202ENST00000310301 TEX15Q9BXT5 2789 aa5.25□□□□□ -1.57
VPS41-202ENST00000310301 PRAC1Q96KF2 57 aa5.25□□□□□ -1.57
VPS41-202ENST00000310301 A0A0C4DFX4 3053 aa5.25□□□□□ -1.57
VPS41-202ENST00000310301 PLA2G2DQ9UNK4 145 aa5.25□□□□□ -1.57
VPS41-202ENST00000310301 IGLV5-48A0A075B6I7 105 aa5.24□□□□□ -1.57
VPS41-202ENST00000310301 FP248Q71RG6 208 aaPredicted RBP5.24□□□□□ -1.57
VPS41-202ENST00000310301 BPTFQ12830 3046 aa5.24□□□□□ -1.57
VPS41-202ENST00000310301 ANAPC11Q9NYG5 84 aa5.24□□□□□ -1.57
VPS41-202ENST00000310301 CYSTM1Q9H1C7 97 aa5.24□□□□□ -1.57
VPS41-202ENST00000310301 ZNF861PO60384 105 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 223.7 ms