RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 IL17DQ8TAD2 202 aa8.61□□□□□ -1.03
RETREG3-201ENST00000309428 KPRPQ5T749 579 aaPredicted RBP8.61□□□□□ -1.03
RETREG3-201ENST00000309428 C22orf24Q9Y442 160 aa8.61□□□□□ -1.03
RETREG3-201ENST00000309428 IGKV2-24A0A0C4DH68 120 aa8.61□□□□□ -1.03
RETREG3-201ENST00000309428 SPTSSBQ8NFR3 76 aa8.6□□□□□ -1.03
RETREG3-201ENST00000309428 HIGD2AQ9BW72 106 aa8.6□□□□□ -1.03
RETREG3-201ENST00000309428 Q6ZQT0 140 aa8.59□□□□□ -1.03
RETREG3-201ENST00000309428 COX17Q14061 63 aa8.58□□□□□ -1.04
RETREG3-201ENST00000309428 OXTP01178 125 aa8.57□□□□□ -1.04
RETREG3-201ENST00000309428 C1orf195Q5TG92 126 aa8.57□□□□□ -1.04
RETREG3-201ENST00000309428 LYRM9A8MSI8 78 aa8.57□□□□□ -1.04
RETREG3-201ENST00000309428 ANK3Q12955 4377 aaKnown RBP8.56□□□□□ -1.04
RETREG3-201ENST00000309428 DEFB131BA0A096LNP1 70 aa8.56□□□□□ -1.04
RETREG3-201ENST00000309428 CSMD3Q7Z407 3707 aa8.55□□□□□ -1.04
RETREG3-201ENST00000309428 A0A1B0GUV1 79 aa8.55□□□□□ -1.04
RETREG3-201ENST00000309428 PSCAO43653 123 aa8.55□□□□□ -1.04
RETREG3-201ENST00000309428 LINC01600Q96MT4 127 aa8.55□□□□□ -1.04
RETREG3-201ENST00000309428 PRYO14603 147 aa8.55□□□□□ -1.04
RETREG3-201ENST00000309428 H7BZZ5 65 aa8.54□□□□□ -1.04
RETREG3-201ENST00000309428 V9GYY9 64 aa8.53□□□□□ -1.04
RETREG3-201ENST00000309428 Q6ZRU5 148 aa8.53□□□□□ -1.04
RETREG3-201ENST00000309428 Q8NAQ8 132 aa8.53□□□□□ -1.04
RETREG3-201ENST00000309428 PRO0628Q9UI54 55 aa8.53□□□□□ -1.04
RETREG3-201ENST00000309428 C11orf45Q8TAV5 145 aa8.53□□□□□ -1.04
RETREG3-201ENST00000309428 M0R378 163 aa8.52□□□□□ -1.04
RETREG3-201ENST00000309428 SYCNQ0VAF6 134 aa8.52□□□□□ -1.04
RETREG3-201ENST00000309428 C6orf48Q9UBA6 75 aa8.52□□□□□ -1.04
RETREG3-201ENST00000309428 NDUFC1O43677 76 aa8.52□□□□□ -1.05
RETREG3-201ENST00000309428 LELP1Q5T871 98 aa8.52□□□□□ -1.05
RETREG3-201ENST00000309428 Q8NDZ9 215 aa8.52□□□□□ -1.05
RETREG3-201ENST00000309428 LYPD5Q6UWN5 251 aa8.52□□□□□ -1.05
RETREG3-201ENST00000309428 NDUFS5O43920 106 aa8.51□□□□□ -1.05
RETREG3-201ENST00000309428 MP68P56378 58 aa8.51□□□□□ -1.05
RETREG3-201ENST00000309428 SMIM29Q86T20 159 aa8.51□□□□□ -1.05
RETREG3-201ENST00000309428 KRTAP10-11P60412 298 aa8.5□□□□□ -1.05
RETREG3-201ENST00000309428 KRTAP24-1Q3LI83 254 aa8.5□□□□□ -1.05
RETREG3-201ENST00000309428 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.5□□□□□ -1.05
RETREG3-201ENST00000309428 KIAA0087Q14695 138 aa8.49□□□□□ -1.05
RETREG3-201ENST00000309428 C1orf137Q5JT78 98 aa8.49□□□□□ -1.05
RETREG3-201ENST00000309428 H0Y9J4 135 aa8.48□□□□□ -1.05
RETREG3-201ENST00000309428 ESRGQ1W209 222 aa8.48□□□□□ -1.05
RETREG3-201ENST00000309428 A0A0G2JQZ4 141 aa8.48□□□□□ -1.05
RETREG3-201ENST00000309428 A0A1W2PNN7 141 aa8.48□□□□□ -1.05
RETREG3-201ENST00000309428 LINC00208Q96KT6 92 aa8.47□□□□□ -1.05
RETREG3-201ENST00000309428 CXCL6P80162 114 aa8.46□□□□□ -1.05
RETREG3-201ENST00000309428 H3BQ85 93 aa8.45□□□□□ -1.06
RETREG3-201ENST00000309428 Q5XG85 94 aa8.45□□□□□ -1.06
RETREG3-201ENST00000309428 UBE2DNLQ8IWF7 75 aa8.44□□□□□ -1.06
RETREG3-201ENST00000309428 OBSCN-AS1Q96MR7 158 aa8.44□□□□□ -1.06
RETREG3-201ENST00000309428 ST20-AS1Q8NBB2 130 aa8.43□□□□□ -1.06
RETREG3-201ENST00000309428 EGFEM1PQ0D2K5 195 aa8.42□□□□□ -1.06
RETREG3-201ENST00000309428 LOC110117498A0A087WWA1 95 aa8.42□□□□□ -1.06
RETREG3-201ENST00000309428 CHKB-CPT1BH3BT56 60 aa8.42□□□□□ -1.06
RETREG3-201ENST00000309428 CASC10Q5T4H9 136 aa8.42□□□□□ -1.06
RETREG3-201ENST00000309428 A0A087WSZ3 146 aa8.41□□□□□ -1.06
RETREG3-201ENST00000309428 ATP5EP56381 51 aaPredicted RBP8.41□□□□□ -1.06
RETREG3-201ENST00000309428 KLKP1Q107X0 134 aa8.41□□□□□ -1.06
RETREG3-201ENST00000309428 IGLV6-57P01721 117 aa8.4□□□□□ -1.06
RETREG3-201ENST00000309428 FAM168BA1KXE4 195 aa8.4□□□□□ -1.07
RETREG3-201ENST00000309428 PMAIP1Q13794 54 aa8.4□□□□□ -1.07
RETREG3-201ENST00000309428 C7orf33Q8WU49 177 aa8.39□□□□□ -1.07
RETREG3-201ENST00000309428 ELOF1P60002 83 aaKnown RBP8.39□□□□□ -1.07
RETREG3-201ENST00000309428 PRLHP81277 87 aa8.39□□□□□ -1.07
RETREG3-201ENST00000309428 CDK2AP2O75956 126 aa8.38□□□□□ -1.07
RETREG3-201ENST00000309428 UBE2AP49459 152 aa8.38□□□□□ -1.07
RETREG3-201ENST00000309428 SRRM2Q9UQ35 2752 aaKnown RBP8.37□□□□□ -1.07
RETREG3-201ENST00000309428 Q6ZRP5 223 aa8.37□□□□□ -1.07
RETREG3-201ENST00000309428 A6NED7 52 aa8.37□□□□□ -1.07
RETREG3-201ENST00000309428 LINC00612Q8N6U2 182 aa8.37□□□□□ -1.07
RETREG3-201ENST00000309428 PCOTHQ58A44 107 aa8.36□□□□□ -1.07
RETREG3-201ENST00000309428 VPREB1P12018 145 aa8.36□□□□□ -1.07
RETREG3-201ENST00000309428 RPL37AP61513 92 aaKnown RBP8.36□□□□□ -1.07
RETREG3-201ENST00000309428 FP248Q71RG6 208 aaPredicted RBP8.36□□□□□ -1.07
RETREG3-201ENST00000309428 FAM229BQ4G0N7 80 aa8.35□□□□□ -1.07
RETREG3-201ENST00000309428 PRR15LQ9BU68 103 aa8.35□□□□□ -1.07
RETREG3-201ENST00000309428 DHRS4-AS1Q9P1J3 65 aa8.34□□□□□ -1.07
RETREG3-201ENST00000309428 IGKV4-1P06312 121 aa8.34□□□□□ -1.08
RETREG3-201ENST00000309428 SERTAD4-AS1Q5TG53 156 aa8.33□□□□□ -1.08
RETREG3-201ENST00000309428 TRBV7-4A0A0J9YYF1 115 aa8.33□□□□□ -1.08
RETREG3-201ENST00000309428 K7EQZ3 153 aa8.33□□□□□ -1.08
RETREG3-201ENST00000309428 SEC61GP60059 68 aa8.33□□□□□ -1.08
RETREG3-201ENST00000309428 LINC00167Q96N53 147 aa8.32□□□□□ -1.08
RETREG3-201ENST00000309428 COL7A1Q02388 2944 aa8.32□□□□□ -1.08
RETREG3-201ENST00000309428 A8MUN3 132 aa8.31□□□□□ -1.08
RETREG3-201ENST00000309428 TGP01266 2768 aa8.31□□□□□ -1.08
RETREG3-201ENST00000309428 NDUFB1O75438 58 aa8.31□□□□□ -1.08
RETREG3-201ENST00000309428 LINC00528Q8N1L1 170 aa8.3□□□□□ -1.08
RETREG3-201ENST00000309428 C15orf56Q8N910 161 aa8.3□□□□□ -1.08
RETREG3-201ENST00000309428 HCG22E2RYF7 251 aa8.29□□□□□ -1.08
RETREG3-201ENST00000309428 C1orf64Q8NEQ6 169 aa8.29□□□□□ -1.08
RETREG3-201ENST00000309428 LINC00588Q9Y4M8 146 aa8.29□□□□□ -1.08
RETREG3-201ENST00000309428 SPINK6Q6UWN8 80 aa8.28□□□□□ -1.08
RETREG3-201ENST00000309428 Q8N377 158 aa8.28□□□□□ -1.08
RETREG3-201ENST00000309428 IGLV9-49A0A0B4J1Y8 123 aa8.28□□□□□ -1.08
RETREG3-201ENST00000309428 BCE1O60756 84 aa8.28□□□□□ -1.08
RETREG3-201ENST00000309428 MRPL55Q7Z7F7 128 aaKnown RBP8.28□□□□□ -1.08
RETREG3-201ENST00000309428 CHTF8P0CG12 524 aa8.27□□□□□ -1.09
RETREG3-201ENST00000309428 H0Y9P7 68 aa8.27□□□□□ -1.09
RETREG3-201ENST00000309428 PRR34Q9NV39 138 aa8.27□□□□□ -1.09
RETREG3-201ENST00000309428 CASC2Q6XLA1 102 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms