RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 SPINT4Q6UDR6 99 aa5.73□□□□□ -1.49
PCDHB1-201ENST00000306549 UBR5O95071 2799 aaPredicted RBP5.73□□□□□ -1.49
PCDHB1-201ENST00000306549 KRTAP1-3Q8IUG1 177 aa5.73□□□□□ -1.49
PCDHB1-201ENST00000306549 Q96NJ1 140 aa5.73□□□□□ -1.49
PCDHB1-201ENST00000306549 C8orf87E5RJ46 101 aa5.73□□□□□ -1.49
PCDHB1-201ENST00000306549 WIPF1O43516 503 aa5.72□□□□□ -1.49
PCDHB1-201ENST00000306549 LINC00167Q96N53 147 aa5.72□□□□□ -1.49
PCDHB1-201ENST00000306549 TNRC18O15417 2968 aaPredicted RBP5.72□□□□□ -1.49
PCDHB1-201ENST00000306549 SERTAD4-AS1Q5TG53 156 aa5.72□□□□□ -1.49
PCDHB1-201ENST00000306549 GVQW2A0A096LPI5 108 aaPredicted RBP5.72□□□□□ -1.49
PCDHB1-201ENST00000306549 IGHV3OR16-9A0A0B4J2B5 98 aa5.72□□□□□ -1.49
PCDHB1-201ENST00000306549 A0A087WVE0 104 aa5.72□□□□□ -1.49
PCDHB1-201ENST00000306549 K7EIL1 84 aa5.72□□□□□ -1.49
PCDHB1-201ENST00000306549 CDIP1Q9H305 208 aa5.71□□□□□ -1.49
PCDHB1-201ENST00000306549 LINC00315P59091 139 aa5.71□□□□□ -1.5
PCDHB1-201ENST00000306549 IGLV5-45A0A087WSX0 123 aa5.71□□□□□ -1.5
PCDHB1-201ENST00000306549 CSNK1G2-AS1Q8NCQ2 148 aa5.7□□□□□ -1.5
PCDHB1-201ENST00000306549 IGLV5-39A0A0G2JS06 123 aa5.7□□□□□ -1.5
PCDHB1-201ENST00000306549 GAS8-AS1O95177 125 aa5.7□□□□□ -1.5
PCDHB1-201ENST00000306549 ADAMTSL4-AS1Q5T5F5 129 aa5.7□□□□□ -1.5
PCDHB1-201ENST00000306549 SMIM29Q86T20 159 aa5.7□□□□□ -1.5
PCDHB1-201ENST00000306549 ITPR1Q14643 2758 aa5.7□□□□□ -1.5
PCDHB1-201ENST00000306549 LOC101927531A0A1B0GV80 90 aa5.69□□□□□ -1.5
PCDHB1-201ENST00000306549 BCE1O60756 84 aa5.69□□□□□ -1.5
PCDHB1-201ENST00000306549 CRIPTQ9P021 101 aa5.68□□□□□ -1.5
PCDHB1-201ENST00000306549 LINC00588Q9Y4M8 146 aa5.68□□□□□ -1.5
PCDHB1-201ENST00000306549 RBM12B-AS1Q9P1G2 102 aa5.68□□□□□ -1.5
PCDHB1-201ENST00000306549 VPREB1P12018 145 aa5.68□□□□□ -1.5
PCDHB1-201ENST00000306549 EPM2AB3EWF7 344 aa5.67□□□□□ -1.5
PCDHB1-201ENST00000306549 XIRP2A4UGR9 3374 aa5.67□□□□□ -1.5
PCDHB1-201ENST00000306549 PHF5AQ7RTV0 110 aaKnown RBP5.67□□□□□ -1.5
PCDHB1-201ENST00000306549 Q6ZSN1 163 aa5.67□□□□□ -1.5
PCDHB1-201ENST00000306549 KRTAP1-1Q07627 177 aa5.67□□□□□ -1.5
PCDHB1-201ENST00000306549 TSPEAR-AS2P59090 65 aa5.66□□□□□ -1.5
PCDHB1-201ENST00000306549 Q6ZRX8 168 aa5.66□□□□□ -1.5
PCDHB1-201ENST00000306549 CHTF8P0CG12 524 aa5.66□□□□□ -1.5
PCDHB1-201ENST00000306549 LINC00476Q8WZB0 136 aa5.66□□□□□ -1.5
PCDHB1-201ENST00000306549 LINC00846Q9NV44 126 aa5.66□□□□□ -1.5
PCDHB1-201ENST00000306549 Q9UF83 564 aa5.65□□□□□ -1.5
PCDHB1-201ENST00000306549 ELOF1P60002 83 aaKnown RBP5.65□□□□□ -1.51
PCDHB1-201ENST00000306549 LINC00304Q8N9R0 145 aa5.65□□□□□ -1.51
PCDHB1-201ENST00000306549 LINC00612Q8N6U2 182 aa5.64□□□□□ -1.51
PCDHB1-201ENST00000306549 SSBP3-AS1Q7Z2R9 100 aa5.63□□□□□ -1.51
PCDHB1-201ENST00000306549 IGLV8-61A0A075B6I0 122 aa5.63□□□□□ -1.51
PCDHB1-201ENST00000306549 KRTAP10-11P60412 298 aa5.63□□□□□ -1.51
PCDHB1-201ENST00000306549 FRYQ5TBA9 3013 aa5.63□□□□□ -1.51
PCDHB1-201ENST00000306549 ST20-AS1Q8NBB2 130 aa5.62□□□□□ -1.51
PCDHB1-201ENST00000306549 APLNQ9ULZ1 77 aa5.62□□□□□ -1.51
PCDHB1-201ENST00000306549 LINC01600Q96MT4 127 aa5.62□□□□□ -1.51
PCDHB1-201ENST00000306549 CDH23Q9H251 3354 aa5.61□□□□□ -1.51
PCDHB1-201ENST00000306549 PRR34Q9NV39 138 aa5.61□□□□□ -1.51
PCDHB1-201ENST00000306549 APCP25054 2843 aa5.6□□□□□ -1.51
PCDHB1-201ENST00000306549 LAMA1P25391 3075 aa5.6□□□□□ -1.51
PCDHB1-201ENST00000306549 TRBV7-4A0A0J9YYF1 115 aa5.6□□□□□ -1.51
PCDHB1-201ENST00000306549 KRTAP21-3Q3LHN1 58 aa5.6□□□□□ -1.51
PCDHB1-201ENST00000306549 MRPL34Q9BQ48 92 aaKnown RBP5.6□□□□□ -1.51
PCDHB1-201ENST00000306549 A8MWP4 228 aa5.6□□□□□ -1.51
PCDHB1-201ENST00000306549 IGLV5-37A0A075B6J1 123 aa5.6□□□□□ -1.51
PCDHB1-201ENST00000306549 UQCR11O14957 56 aa5.6□□□□□ -1.51
PCDHB1-201ENST00000306549 USP34Q70CQ2 3546 aa5.59□□□□□ -1.51
PCDHB1-201ENST00000306549 LOC110117498A0A087WWA1 95 aa5.59□□□□□ -1.51
PCDHB1-201ENST00000306549 NBEAQ8NFP9 2946 aa5.59□□□□□ -1.51
PCDHB1-201ENST00000306549 HIVEP1P15822 2718 aa5.59□□□□□ -1.52
PCDHB1-201ENST00000306549 PRO0628Q9UI54 55 aa5.58□□□□□ -1.52
PCDHB1-201ENST00000306549 ZZEF1O43149 2961 aa5.58□□□□□ -1.52
PCDHB1-201ENST00000306549 PLA2G2DQ9UNK4 145 aa5.58□□□□□ -1.52
PCDHB1-201ENST00000306549 DMXL2Q8TDJ6 3036 aa5.57□□□□□ -1.52
PCDHB1-201ENST00000306549 TLX1NBP0CAT3 122 aa5.57□□□□□ -1.52
PCDHB1-201ENST00000306549 URB1-AS1Q96HZ7 61 aa5.56□□□□□ -1.52
PCDHB1-201ENST00000306549 A0A096LNJ9 63 aa5.56□□□□□ -1.52
PCDHB1-201ENST00000306549 Q6ZQT0 140 aa5.56□□□□□ -1.52
PCDHB1-201ENST00000306549 CNBPP62633 177 aaKnown RBP5.55□□□□□ -1.52
PCDHB1-201ENST00000306549 COL6A3P12111 3177 aa5.55□□□□□ -1.52
PCDHB1-201ENST00000306549 A0A087WTM6 91 aa5.55□□□□□ -1.52
PCDHB1-201ENST00000306549 C9orf163Q8N9P6 203 aa5.55□□□□□ -1.52
PCDHB1-201ENST00000306549 SZT2Q5T011 3432 aa5.55□□□□□ -1.52
PCDHB1-201ENST00000306549 NIPBLQ6KC79 2804 aaeCLIP5.55□□□□□ -1.52
PCDHB1-201ENST00000306549 KRTAP10-3P60369 221 aa5.54□□□□□ -1.52
PCDHB1-201ENST00000306549 ZNF861PO60384 105 aa5.54□□□□□ -1.52
PCDHB1-201ENST00000306549 LUZP6Q538Z0 58 aa5.54□□□□□ -1.52
PCDHB1-201ENST00000306549 CYP4F30PQ9H0H9 118 aa5.54□□□□□ -1.52
PCDHB1-201ENST00000306549 LRBAP50851 2863 aa5.53□□□□□ -1.52
PCDHB1-201ENST00000306549 GIG44P09565 113 aaPredicted RBP5.53□□□□□ -1.52
PCDHB1-201ENST00000306549 OBSCN-AS1Q96MR7 158 aa5.53□□□□□ -1.52
PCDHB1-201ENST00000306549 IGLV6-57P01721 117 aa5.52□□□□□ -1.53
PCDHB1-201ENST00000306549 C9orf129Q5T035 196 aaKnown RBP5.52□□□□□ -1.53
PCDHB1-201ENST00000306549 C9orf92A6NGG3 77 aa5.52□□□□□ -1.53
PCDHB1-201ENST00000306549 LINC00310P59036 64 aa5.52□□□□□ -1.53
PCDHB1-201ENST00000306549 ZNF575Q86XF7 245 aa5.52□□□□□ -1.53
PCDHB1-201ENST00000306549 NBEAL2Q6ZNJ1 2754 aa5.51□□□□□ -1.53
PCDHB1-201ENST00000306549 LINC01554Q52M75 96 aa5.51□□□□□ -1.53
PCDHB1-201ENST00000306549 MIR22HGQ0VDD5 57 aa5.5□□□□□ -1.53
PCDHB1-201ENST00000306549 KCNQ1DNQ9H478 68 aa5.5□□□□□ -1.53
PCDHB1-201ENST00000306549 DSCR10P59022 87 aa5.5□□□□□ -1.53
PCDHB1-201ENST00000306549 COA5Q86WW8 74 aa5.5□□□□□ -1.53
PCDHB1-201ENST00000306549 M0R2T5 61 aa5.5□□□□□ -1.53
PCDHB1-201ENST00000306549 LINC00483Q53H64 154 aa5.5□□□□□ -1.53
PCDHB1-201ENST00000306549 COL12A1Q99715 3063 aa5.49□□□□□ -1.53
PCDHB1-201ENST00000306549 A0A1B0GVX0 72 aa5.49□□□□□ -1.53
PCDHB1-201ENST00000306549 ERC2-IT1O76042 136 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms