RNA–Protein interactions for RNA: ENST00000304992.10

PRPF8-201, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF8, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-201ENST00000304992 A0A0G2JQZ4 141 aa6.7□□□□□ -1.34
PRPF8-201ENST00000304992 A0A1W2PNN7 141 aa6.7□□□□□ -1.34
PRPF8-201ENST00000304992 ITPR3Q14573 2671 aa6.7□□□□□ -1.34
PRPF8-201ENST00000304992 KRTAP1-3Q8IUG1 177 aa6.69□□□□□ -1.34
PRPF8-201ENST00000304992 KLK9Q2XQG4 91 aa6.69□□□□□ -1.34
PRPF8-201ENST00000304992 OBSCN-AS1Q96MR7 158 aa6.69□□□□□ -1.34
PRPF8-201ENST00000304992 LOC110117498A0A087WWA1 95 aa6.68□□□□□ -1.34
PRPF8-201ENST00000304992 TRBV7-4A0A0J9YYF1 115 aa6.68□□□□□ -1.34
PRPF8-201ENST00000304992 CFAP46Q8IYW2 2715 aa6.68□□□□□ -1.34
PRPF8-201ENST00000304992 ZNF861PO60384 105 aa6.68□□□□□ -1.34
PRPF8-201ENST00000304992 CASC10Q5T4H9 136 aa6.67□□□□□ -1.34
PRPF8-201ENST00000304992 K7EQZ3 153 aa6.67□□□□□ -1.34
PRPF8-201ENST00000304992 C9orf129Q5T035 196 aaKnown RBP6.67□□□□□ -1.34
PRPF8-201ENST00000304992 LITAFQ99732 161 aa6.67□□□□□ -1.34
PRPF8-201ENST00000304992 A0A1B0GW54 56 aa6.66□□□□□ -1.34
PRPF8-201ENST00000304992 A8MWP4 228 aa6.66□□□□□ -1.34
PRPF8-201ENST00000304992 KCNQ1DNQ9H478 68 aa6.66□□□□□ -1.34
PRPF8-201ENST00000304992 PRR34Q9NV39 138 aa6.65□□□□□ -1.34
PRPF8-201ENST00000304992 KRTAP1-1Q07627 177 aa6.65□□□□□ -1.34
PRPF8-201ENST00000304992 IGFL1Q6UW32 110 aa6.65□□□□□ -1.34
PRPF8-201ENST00000304992 MRPL34Q9BQ48 92 aaKnown RBP6.65□□□□□ -1.34
PRPF8-201ENST00000304992 CHD7Q9P2D1 2997 aa6.64□□□□□ -1.35
PRPF8-201ENST00000304992 APLNQ9ULZ1 77 aa6.64□□□□□ -1.35
PRPF8-201ENST00000304992 CENPEQ02224 2701 aa6.64□□□□□ -1.35
PRPF8-201ENST00000304992 EIF4EBP3O60516 100 aaPredicted RBP6.64□□□□□ -1.35
PRPF8-201ENST00000304992 C9orf163Q8N9P6 203 aa6.64□□□□□ -1.35
PRPF8-201ENST00000304992 C8orf87E5RJ46 101 aa6.64□□□□□ -1.35
PRPF8-201ENST00000304992 PRO0461Q9UI25 63 aa6.62□□□□□ -1.35
PRPF8-201ENST00000304992 PSORS1C2Q9UIG4 136 aa6.62□□□□□ -1.35
PRPF8-201ENST00000304992 LINC00336Q6ZUF6 198 aa6.62□□□□□ -1.35
PRPF8-201ENST00000304992 LINC00528Q8N1L1 170 aa6.62□□□□□ -1.35
PRPF8-201ENST00000304992 IGLV7-43P04211 117 aa6.61□□□□□ -1.35
PRPF8-201ENST00000304992 LOC101927531A0A1B0GV80 90 aa6.6□□□□□ -1.35
PRPF8-201ENST00000304992 RANBP2P49792 3224 aaKnown RBP6.6□□□□□ -1.35
PRPF8-201ENST00000304992 H3BPC8 53 aa6.59□□□□□ -1.35
PRPF8-201ENST00000304992 SSBP3-AS1Q7Z2R9 100 aa6.59□□□□□ -1.35
PRPF8-201ENST00000304992 Q8N377 158 aa6.59□□□□□ -1.35
PRPF8-201ENST00000304992 LINC00612Q8N6U2 182 aa6.58□□□□□ -1.36
PRPF8-201ENST00000304992 TNP2Q05952 138 aa6.58□□□□□ -1.36
PRPF8-201ENST00000304992 C8orf17Q9NRJ1 99 aa6.58□□□□□ -1.36
PRPF8-201ENST00000304992 MKI67P46013 3256 aaKnown RBP6.57□□□□□ -1.36
PRPF8-201ENST00000304992 ZNF575Q86XF7 245 aa6.57□□□□□ -1.36
PRPF8-201ENST00000304992 IGLV5-37A0A075B6J1 123 aa6.57□□□□□ -1.36
PRPF8-201ENST00000304992 LAMA3Q16787 3333 aa6.56□□□□□ -1.36
PRPF8-201ENST00000304992 ERC2-IT1O76042 136 aa6.56□□□□□ -1.36
PRPF8-201ENST00000304992 LINC01600Q96MT4 127 aa6.56□□□□□ -1.36
PRPF8-201ENST00000304992 A0A1B0GVX0 72 aa6.55□□□□□ -1.36
PRPF8-201ENST00000304992 CFAP54Q96N23 3096 aa6.55□□□□□ -1.36
PRPF8-201ENST00000304992 PRR15Q8IV56 129 aa6.54□□□□□ -1.36
PRPF8-201ENST00000304992 TEP1Q99973 2627 aaKnown RBP6.54□□□□□ -1.36
PRPF8-201ENST00000304992 TLX1NBP0CAT3 122 aa6.54□□□□□ -1.36
PRPF8-201ENST00000304992 AKAP13Q12802 2813 aa6.54□□□□□ -1.36
PRPF8-201ENST00000304992 SETXQ7Z333 2677 aaKnown RBP6.53□□□□□ -1.36
PRPF8-201ENST00000304992 LINC01554Q52M75 96 aa6.53□□□□□ -1.36
PRPF8-201ENST00000304992 SPRR4Q96PI1 79 aa6.52□□□□□ -1.36
PRPF8-201ENST00000304992 COA5Q86WW8 74 aa6.52□□□□□ -1.37
PRPF8-201ENST00000304992 BRCA2P51587 3418 aa6.52□□□□□ -1.37
PRPF8-201ENST00000304992 RBM12B-AS1Q9P1G2 102 aa6.52□□□□□ -1.37
PRPF8-201ENST00000304992 C4orf26Q17RF5 130 aa6.52□□□□□ -1.37
PRPF8-201ENST00000304992 CNBPP62633 177 aaKnown RBP6.51□□□□□ -1.37
PRPF8-201ENST00000304992 PLA2G2DQ9UNK4 145 aa6.51□□□□□ -1.37
PRPF8-201ENST00000304992 TEX15Q9BXT5 2789 aa6.5□□□□□ -1.37
PRPF8-201ENST00000304992 MGAQ8IWI9 3026 aa6.49□□□□□ -1.37
PRPF8-201ENST00000304992 STAB1Q9NY15 2570 aa6.49□□□□□ -1.37
PRPF8-201ENST00000304992 CR1P17927 2039 aa6.49□□□□□ -1.37
PRPF8-201ENST00000304992 PRUNE2Q8WUY3 3088 aa6.49□□□□□ -1.37
PRPF8-201ENST00000304992 Q8N1X5 172 aa6.48□□□□□ -1.37
PRPF8-201ENST00000304992 SPINT4Q6UDR6 99 aa6.48□□□□□ -1.37
PRPF8-201ENST00000304992 A0A0C4DFX4 3053 aa6.47□□□□□ -1.37
PRPF8-201ENST00000304992 PRR26Q8N8Z3 221 aa6.47□□□□□ -1.37
PRPF8-201ENST00000304992 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.46□□□□□ -1.37
PRPF8-201ENST00000304992 LAMA2P24043 3122 aaKnown RBP6.46□□□□□ -1.38
PRPF8-201ENST00000304992 HTTP42858 3142 aa6.46□□□□□ -1.38
PRPF8-201ENST00000304992 CHD6Q8TD26 2715 aa6.45□□□□□ -1.38
PRPF8-201ENST00000304992 A8MUN3 132 aa6.45□□□□□ -1.38
PRPF8-201ENST00000304992 A0A0D9SG42 100 aa6.44□□□□□ -1.38
PRPF8-201ENST00000304992 IGLV5-48A0A075B6I7 105 aa6.44□□□□□ -1.38
PRPF8-201ENST00000304992 Q6ZSA8 131 aa6.44□□□□□ -1.38
PRPF8-201ENST00000304992 A0A1W2PNM2 257 aa6.43□□□□□ -1.38
PRPF8-201ENST00000304992 M0R2T5 61 aa6.43□□□□□ -1.38
PRPF8-201ENST00000304992 WDFY4Q6ZS81 3184 aa6.43□□□□□ -1.38
PRPF8-201ENST00000304992 UQCR11O14957 56 aa6.43□□□□□ -1.38
PRPF8-201ENST00000304992 IGLV7-46A0A075B6I9 117 aa6.42□□□□□ -1.38
PRPF8-201ENST00000304992 CHD9Q3L8U1 2897 aa6.42□□□□□ -1.38
PRPF8-201ENST00000304992 XIRP2A4UGR9 3374 aa6.42□□□□□ -1.38
PRPF8-201ENST00000304992 PRO0628Q9UI54 55 aa6.42□□□□□ -1.38
PRPF8-201ENST00000304992 MIR22HGQ0VDD5 57 aa6.38□□□□□ -1.39
PRPF8-201ENST00000304992 CRIPTQ9P021 101 aa6.38□□□□□ -1.39
PRPF8-201ENST00000304992 RPS28P62857 69 aaKnown RBP6.36□□□□□ -1.39
PRPF8-201ENST00000304992 COL6A5A8TX70 2615 aa6.35□□□□□ -1.39
PRPF8-201ENST00000304992 FAM104AQ969W3 186 aa6.34□□□□□ -1.39
PRPF8-201ENST00000304992 UNC80Q8N2C7 3258 aa6.32□□□□□ -1.4
PRPF8-201ENST00000304992 BAHCC1Q9P281 2608 aa6.32□□□□□ -1.4
PRPF8-201ENST00000304992 MAP1AP78559 2803 aaPredicted RBP6.32□□□□□ -1.4
PRPF8-201ENST00000304992 TRIOO75962 3097 aa6.32□□□□□ -1.4
PRPF8-201ENST00000304992 FLG2Q5D862 2391 aaPredicted RBP6.32□□□□□ -1.4
PRPF8-201ENST00000304992 DSPP15924 2871 aaKnown RBP6.32□□□□□ -1.4
PRPF8-201ENST00000304992 UNC79Q9P2D8 2635 aa6.31□□□□□ -1.4
PRPF8-201ENST00000304992 NBEAL1Q6ZS30 2694 aa6.31□□□□□ -1.4
PRPF8-201ENST00000304992 CYP4F30PQ9H0H9 118 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms