RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 Q8N377 158 aa9.17□□□□□ -0.94
PRKCB-201ENST00000303531 A8MUN3 132 aa9.16□□□□□ -0.94
PRKCB-201ENST00000303531 PLA2G1BP04054 148 aaKnown RBP9.16□□□□□ -0.94
PRKCB-201ENST00000303531 LINC00612Q8N6U2 182 aa9.15□□□□□ -0.94
PRKCB-201ENST00000303531 KRTAP10-3P60369 221 aa9.15□□□□□ -0.94
PRKCB-201ENST00000303531 PRR15Q8IV56 129 aa9.15□□□□□ -0.95
PRKCB-201ENST00000303531 K7EIL1 84 aa9.14□□□□□ -0.95
PRKCB-201ENST00000303531 A0A0G2JQZ4 141 aa9.14□□□□□ -0.95
PRKCB-201ENST00000303531 A0A1W2PNN7 141 aa9.14□□□□□ -0.95
PRKCB-201ENST00000303531 KLKP1Q107X0 134 aa9.13□□□□□ -0.95
PRKCB-201ENST00000303531 C8orf17Q9NRJ1 99 aa9.13□□□□□ -0.95
PRKCB-201ENST00000303531 WWC2-AS2Q96NR7 200 aa9.12□□□□□ -0.95
PRKCB-201ENST00000303531 DSCR10P59022 87 aa9.12□□□□□ -0.95
PRKCB-201ENST00000303531 LINC01600Q96MT4 127 aa9.11□□□□□ -0.95
PRKCB-201ENST00000303531 FLNBO75369 2602 aaKnown RBP9.1□□□□□ -0.95
PRKCB-201ENST00000303531 TLX1NBP0CAT3 122 aa9.09□□□□□ -0.95
PRKCB-201ENST00000303531 A0A1B0GVX0 72 aa9.09□□□□□ -0.95
PRKCB-201ENST00000303531 CYP4F30PQ9H0H9 118 aa9.09□□□□□ -0.95
PRKCB-201ENST00000303531 ZNF861PO60384 105 aa9.08□□□□□ -0.96
PRKCB-201ENST00000303531 PLA2G2DQ9UNK4 145 aa9.08□□□□□ -0.96
PRKCB-201ENST00000303531 MGAM2Q2M2H8 2515 aa9.08□□□□□ -0.96
PRKCB-201ENST00000303531 H7BZZ5 65 aa9.06□□□□□ -0.96
PRKCB-201ENST00000303531 UQCR11O14957 56 aa9.05□□□□□ -0.96
PRKCB-201ENST00000303531 C9orf163Q8N9P6 203 aa9.04□□□□□ -0.96
PRKCB-201ENST00000303531 SSBP3-AS1Q7Z2R9 100 aa9.04□□□□□ -0.96
PRKCB-201ENST00000303531 A0A087WTM6 91 aa9.04□□□□□ -0.96
PRKCB-201ENST00000303531 OBSCN-AS1Q96MR7 158 aa9.04□□□□□ -0.96
PRKCB-201ENST00000303531 ANAPC11Q9NYG5 84 aa9.04□□□□□ -0.96
PRKCB-201ENST00000303531 CASC10Q5T4H9 136 aa9.03□□□□□ -0.96
PRKCB-201ENST00000303531 LINC00304Q8N9R0 145 aa9.02□□□□□ -0.97
PRKCB-201ENST00000303531 A0A1W2PNM2 257 aa9.01□□□□□ -0.97
PRKCB-201ENST00000303531 CEP350Q5VT06 3117 aa9.01□□□□□ -0.97
PRKCB-201ENST00000303531 SPINT4Q6UDR6 99 aa9□□□□□ -0.97
PRKCB-201ENST00000303531 C9orf92A6NGG3 77 aa8.99□□□□□ -0.97
PRKCB-201ENST00000303531 UTRNP46939 3433 aa8.98□□□□□ -0.97
PRKCB-201ENST00000303531 ZNF575Q86XF7 245 aa8.98□□□□□ -0.97
PRKCB-201ENST00000303531 LINC00336Q6ZUF6 198 aa8.98□□□□□ -0.97
PRKCB-201ENST00000303531 MIR22HGQ0VDD5 57 aa8.97□□□□□ -0.97
PRKCB-201ENST00000303531 KRTAP1-3Q8IUG1 177 aa8.97□□□□□ -0.97
PRKCB-201ENST00000303531 ATRQ13535 2644 aa8.97□□□□□ -0.97
PRKCB-201ENST00000303531 PSORS1C2Q9UIG4 136 aa8.97□□□□□ -0.97
PRKCB-201ENST00000303531 MAST4O15021 2626 aa8.96□□□□□ -0.97
PRKCB-201ENST00000303531 IGLV7-43P04211 117 aa8.96□□□□□ -0.98
PRKCB-201ENST00000303531 SPRR4Q96PI1 79 aa8.96□□□□□ -0.98
PRKCB-201ENST00000303531 CNBPP62633 177 aaKnown RBP8.95□□□□□ -0.98
PRKCB-201ENST00000303531 HECTD1Q9ULT8 2610 aa8.95□□□□□ -0.98
PRKCB-201ENST00000303531 SMR3BP02814 79 aaPredicted RBP8.93□□□□□ -0.98
PRKCB-201ENST00000303531 APLNQ9ULZ1 77 aa8.93□□□□□ -0.98
PRKCB-201ENST00000303531 IGLV5-48A0A075B6I7 105 aa8.92□□□□□ -0.98
PRKCB-201ENST00000303531 J3QL48 77 aa8.91□□□□□ -0.98
PRKCB-201ENST00000303531 KRTAP1-1Q07627 177 aa8.91□□□□□ -0.98
PRKCB-201ENST00000303531 CR1P17927 2039 aa8.9□□□□□ -0.98
PRKCB-201ENST00000303531 IGLV5-37A0A075B6J1 123 aa8.9□□□□□ -0.99
PRKCB-201ENST00000303531 FLNAP21333 2647 aaKnown RBP8.89□□□□□ -0.99
PRKCB-201ENST00000303531 SPANXA2-OT1Q8N9U9 137 aa8.88□□□□□ -0.99
PRKCB-201ENST00000303531 AKAP13Q12802 2813 aa8.88□□□□□ -0.99
PRKCB-201ENST00000303531 FAM104AQ969W3 186 aa8.87□□□□□ -0.99
PRKCB-201ENST00000303531 COX6B2Q6YFQ2 88 aa8.87□□□□□ -0.99
PRKCB-201ENST00000303531 C5orf42Q9H799 3197 aa8.85□□□□□ -0.99
PRKCB-201ENST00000303531 ITPR3Q14573 2671 aa8.85□□□□□ -0.99
PRKCB-201ENST00000303531 CRIPTQ9P021 101 aa8.85□□□□□ -0.99
PRKCB-201ENST00000303531 CENPEQ02224 2701 aa8.83□□□□□ -1
PRKCB-201ENST00000303531 OCR1Q9BZK8 76 aa8.83□□□□□ -1
PRKCB-201ENST00000303531 Q8N1X5 172 aa8.83□□□□□ -1
PRKCB-201ENST00000303531 KTN1-AS1Q86SY8 53 aa8.8□□□□□ -1
PRKCB-201ENST00000303531 CHD7Q9P2D1 2997 aa8.8□□□□□ -1
PRKCB-201ENST00000303531 PCNTO95613 3336 aa8.79□□□□□ -1
PRKCB-201ENST00000303531 CFAP46Q8IYW2 2715 aa8.79□□□□□ -1
PRKCB-201ENST00000303531 FLG2Q5D862 2391 aaPredicted RBP8.78□□□□□ -1
PRKCB-201ENST00000303531 HELZ2Q9BYK8 2649 aaKnown RBP8.78□□□□□ -1
PRKCB-201ENST00000303531 CD164Q04900 197 aa8.77□□□□□ -1
PRKCB-201ENST00000303531 CDC42SE1Q9NRR8 79 aa8.76□□□□□ -1.01
PRKCB-201ENST00000303531 A0A0D9SG42 100 aa8.75□□□□□ -1.01
PRKCB-201ENST00000303531 PRR26Q8N8Z3 221 aa8.75□□□□□ -1.01
PRKCB-201ENST00000303531 RBM12B-AS1Q9P1G2 102 aa8.74□□□□□ -1.01
PRKCB-201ENST00000303531 LCA10Q71F78 164 aa8.73□□□□□ -1.01
PRKCB-201ENST00000303531 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.73□□□□□ -1.01
PRKCB-201ENST00000303531 TNP2Q05952 138 aa8.72□□□□□ -1.01
PRKCB-201ENST00000303531 Q1T7F1 81 aa8.72□□□□□ -1.01
PRKCB-201ENST00000303531 LINC01554Q52M75 96 aa8.71□□□□□ -1.01
PRKCB-201ENST00000303531 Q8NDZ9 215 aa8.7□□□□□ -1.02
PRKCB-201ENST00000303531 CHD6Q8TD26 2715 aa8.68□□□□□ -1.02
PRKCB-201ENST00000303531 IGLV7-46A0A075B6I9 117 aa8.67□□□□□ -1.02
PRKCB-201ENST00000303531 STAB1Q9NY15 2570 aa8.67□□□□□ -1.02
PRKCB-201ENST00000303531 HRES1P13985 223 aa8.65□□□□□ -1.03
PRKCB-201ENST00000303531 CFAP54Q96N23 3096 aa8.65□□□□□ -1.03
PRKCB-201ENST00000303531 WIPF1O43516 503 aa8.63□□□□□ -1.03
PRKCB-201ENST00000303531 MMP24-AS1A0A0U1RRL7 71 aa8.62□□□□□ -1.03
PRKCB-201ENST00000303531 SPRR1AP35321 89 aa8.62□□□□□ -1.03
PRKCB-201ENST00000303531 CHD9Q3L8U1 2897 aa8.6□□□□□ -1.03
PRKCB-201ENST00000303531 FAM229BQ4G0N7 80 aa8.59□□□□□ -1.03
PRKCB-201ENST00000303531 CYSTM1Q9H1C7 97 aa8.59□□□□□ -1.03
PRKCB-201ENST00000303531 TEX15Q9BXT5 2789 aa8.59□□□□□ -1.03
PRKCB-201ENST00000303531 Q75L30 129 aa8.58□□□□□ -1.04
PRKCB-201ENST00000303531 NBEAL1Q6ZS30 2694 aa8.58□□□□□ -1.04
PRKCB-201ENST00000303531 PLAC8Q9NZF1 115 aa8.57□□□□□ -1.04
PRKCB-201ENST00000303531 A0A1B0GU33 70 aa8.56□□□□□ -1.04
PRKCB-201ENST00000303531 Q6ZSA8 131 aa8.56□□□□□ -1.04
PRKCB-201ENST00000303531 Q8N9P0 234 aaPredicted RBP8.56□□□□□ -1.04
PRKCB-201ENST00000303531 Q5XG85 94 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms