RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 KRTAP4-16G5E9R7 235 aaPredicted RBP10.79□□□□□ -0.68
SPSB3-201ENST00000301717 NDUFC2O95298 119 aa10.79□□□□□ -0.68
SPSB3-201ENST00000301717 PRO1933Q9H354 126 aa10.79□□□□□ -0.68
SPSB3-201ENST00000301717 SCGB1D4Q6XE38 83 aa10.78□□□□□ -0.68
SPSB3-201ENST00000301717 ETDCA0A1B0GVM5 59 aa10.76□□□□□ -0.69
SPSB3-201ENST00000301717 IGLV6-57P01721 117 aa10.76□□□□□ -0.69
SPSB3-201ENST00000301717 S100A7L2Q5SY68 101 aa10.76□□□□□ -0.69
SPSB3-201ENST00000301717 LINC00337Q8N6G1 96 aa10.76□□□□□ -0.69
SPSB3-201ENST00000301717 KRTAP13-2Q52LG2 175 aa10.75□□□□□ -0.69
SPSB3-201ENST00000301717 RPL13AP40429 203 aaKnown RBP10.75□□□□□ -0.69
SPSB3-201ENST00000301717 SPANXCQ9NY87 97 aa10.75□□□□□ -0.69
SPSB3-201ENST00000301717 CRYGAP11844 174 aa10.74□□□□□ -0.69
SPSB3-201ENST00000301717 B5MCH6 92 aa10.73□□□□□ -0.69
SPSB3-201ENST00000301717 SMCR5Q8TEV8 140 aa10.73□□□□□ -0.69
SPSB3-201ENST00000301717 SPANXDQ9BXN6 97 aa10.73□□□□□ -0.69
SPSB3-201ENST00000301717 TRAV23DV6A0A075B6W5 121 aa10.72□□□□□ -0.69
SPSB3-201ENST00000301717 TYMSOSQ8TAI1 123 aa10.72□□□□□ -0.69
SPSB3-201ENST00000301717 ERC2-IT1O76042 136 aa10.71□□□□□ -0.69
SPSB3-201ENST00000301717 COX8AP10176 69 aa10.71□□□□□ -0.69
SPSB3-201ENST00000301717 OR13C6PQ8NH95 151 aa10.71□□□□□ -0.69
SPSB3-201ENST00000301717 C14orf144Q96I85 54 aa10.7□□□□□ -0.7
SPSB3-201ENST00000301717 SPRR4Q96PI1 79 aa10.7□□□□□ -0.7
SPSB3-201ENST00000301717 Q9BRP9 147 aa10.7□□□□□ -0.7
SPSB3-201ENST00000301717 PPDPFQ9H3Y8 114 aa10.69□□□□□ -0.7
SPSB3-201ENST00000301717 UBR4Q5T4S7 5183 aa10.69□□□□□ -0.7
SPSB3-201ENST00000301717 SLC25A34Q6PIV7 304 aa10.68□□□□□ -0.7
SPSB3-201ENST00000301717 MUSTN1Q8IVN3 82 aa10.68□□□□□ -0.7
SPSB3-201ENST00000301717 C3orf22Q8N5N4 141 aa10.68□□□□□ -0.7
SPSB3-201ENST00000301717 LRP2P98164 4655 aa10.68□□□□□ -0.7
SPSB3-201ENST00000301717 ZNF73O43830 326 aaPredicted RBP10.67□□□□□ -0.7
SPSB3-201ENST00000301717 TSPAN13O95857 204 aa10.67□□□□□ -0.7
SPSB3-201ENST00000301717 CTAG1AP78358 180 aa10.67□□□□□ -0.7
SPSB3-201ENST00000301717 FAM229BQ4G0N7 80 aa10.67□□□□□ -0.7
SPSB3-201ENST00000301717 Q6ZRX8 168 aa10.67□□□□□ -0.7
SPSB3-201ENST00000301717 DLEU1O43261 78 aa10.67□□□□□ -0.7
SPSB3-201ENST00000301717 UQCR10Q9UDW1 63 aa10.65□□□□□ -0.7
SPSB3-201ENST00000301717 IFITM1P13164 125 aa10.63□□□□□ -0.71
SPSB3-201ENST00000301717 LPAP08519 4548 aa10.62□□□□□ -0.71
SPSB3-201ENST00000301717 GAGE2AQ6NT46 116 aa10.62□□□□□ -0.71
SPSB3-201ENST00000301717 ZNF706Q9Y5V0 76 aaPredicted RBP10.62□□□□□ -0.71
SPSB3-201ENST00000301717 Q6ZVH6 145 aa10.61□□□□□ -0.71
SPSB3-201ENST00000301717 ST20-AS1Q8NBB2 130 aa10.6□□□□□ -0.71
SPSB3-201ENST00000301717 A6NDN8 102 aa10.59□□□□□ -0.71
SPSB3-201ENST00000301717 C6orf99Q4VX62 202 aa10.59□□□□□ -0.71
SPSB3-201ENST00000301717 LINC00304Q8N9R0 145 aa10.58□□□□□ -0.72
SPSB3-201ENST00000301717 COPS9Q8WXC6 57 aa10.58□□□□□ -0.72
SPSB3-201ENST00000301717 M0R143 59 aa10.58□□□□□ -0.72
SPSB3-201ENST00000301717 LINC00483Q53H64 154 aa10.58□□□□□ -0.72
SPSB3-201ENST00000301717 HIGD1BQ9P298 99 aa10.58□□□□□ -0.72
SPSB3-201ENST00000301717 C2orf91Q6ZV80 131 aa10.57□□□□□ -0.72
SPSB3-201ENST00000301717 HINT1P49773 126 aaPredicted RBP10.56□□□□□ -0.72
SPSB3-201ENST00000301717 A4D1N5 150 aa10.55□□□□□ -0.72
SPSB3-201ENST00000301717 PRR4Q16378 134 aa10.55□□□□□ -0.72
SPSB3-201ENST00000301717 CBY1Q9Y3M2 126 aa10.55□□□□□ -0.72
SPSB3-201ENST00000301717 IGLV9-49A0A0B4J1Y8 123 aa10.54□□□□□ -0.72
SPSB3-201ENST00000301717 COX7BP24311 80 aa10.54□□□□□ -0.72
SPSB3-201ENST00000301717 ELOF1P60002 83 aaKnown RBP10.54□□□□□ -0.72
SPSB3-201ENST00000301717 RETNLBQ9BQ08 111 aa10.54□□□□□ -0.72
SPSB3-201ENST00000301717 HIST1H4GQ99525 98 aa10.53□□□□□ -0.72
SPSB3-201ENST00000301717 Q8NBF4 154 aa10.52□□□□□ -0.73
SPSB3-201ENST00000301717 MOBPQ13875 183 aa10.51□□□□□ -0.73
SPSB3-201ENST00000301717 TAL2Q16559 108 aa10.51□□□□□ -0.73
SPSB3-201ENST00000301717 SMIM11BQ8TCY0 68 aa10.51□□□□□ -0.73
SPSB3-201ENST00000301717 TRAV13-2A0A0B4J235 113 aa10.5□□□□□ -0.73
SPSB3-201ENST00000301717 HSD52Q0P140 79 aa10.5□□□□□ -0.73
SPSB3-201ENST00000301717 SNHG12Q9BXW3 62 aa10.5□□□□□ -0.73
SPSB3-201ENST00000301717 DHRS4-AS1Q9P1J3 65 aa10.49□□□□□ -0.73
SPSB3-201ENST00000301717 BATFQ16520 125 aa10.48□□□□□ -0.73
SPSB3-201ENST00000301717 A0A1B0GV90 55 aa10.46□□□□□ -0.74
SPSB3-201ENST00000301717 DEFB105AQ8NG35 78 aa10.46□□□□□ -0.74
SPSB3-201ENST00000301717 A0A1B0GWB2 263 aa10.45□□□□□ -0.74
SPSB3-201ENST00000301717 CEND1Q8N111 149 aa10.45□□□□□ -0.74
SPSB3-201ENST00000301717 TRBV7-6A0A0J9YX20 115 aa10.44□□□□□ -0.74
SPSB3-201ENST00000301717 C9orf153Q5TBE3 101 aa10.44□□□□□ -0.74
SPSB3-201ENST00000301717 COL5A1-AS1Q5SY13 56 aa10.43□□□□□ -0.74
SPSB3-201ENST00000301717 SPRR1BP22528 89 aa10.41□□□□□ -0.74
SPSB3-201ENST00000301717 C4orf48Q5BLP8 95 aa10.41□□□□□ -0.74
SPSB3-201ENST00000301717 TMEM238LA0A1B0GVL6 79 aa10.41□□□□□ -0.74
SPSB3-201ENST00000301717 A6NJY4 79 aa10.41□□□□□ -0.74
SPSB3-201ENST00000301717 Q1RN00 199 aa10.41□□□□□ -0.74
SPSB3-201ENST00000301717 SPAG11AQ6PDA7 123 aa10.41□□□□□ -0.74
SPSB3-201ENST00000301717 RNF213Q63HN8 5207 aa10.4□□□□□ -0.75
SPSB3-201ENST00000301717 LINC01547P58512 204 aaPredicted RBP10.4□□□□□ -0.75
SPSB3-201ENST00000301717 SSBP3-AS1Q7Z2R9 100 aa10.4□□□□□ -0.75
SPSB3-201ENST00000301717 H7C2G1 150 aa10.39□□□□□ -0.75
SPSB3-201ENST00000301717 CFC1BP0CG36 223 aa10.39□□□□□ -0.75
SPSB3-201ENST00000301717 CFC1P0CG37 223 aa10.39□□□□□ -0.75
SPSB3-201ENST00000301717 FXYD2P54710 66 aa10.39□□□□□ -0.75
SPSB3-201ENST00000301717 BVES-AS1Q5T3Y7 98 aa10.39□□□□□ -0.75
SPSB3-201ENST00000301717 SMIM29Q86T20 159 aa10.36□□□□□ -0.75
SPSB3-201ENST00000301717 TEX49A0A1B0GTD5 131 aa10.35□□□□□ -0.75
SPSB3-201ENST00000301717 SPINK1P00995 79 aa10.35□□□□□ -0.75
SPSB3-201ENST00000301717 LINC00575Q6W349 94 aa10.34□□□□□ -0.75
SPSB3-201ENST00000301717 LAMTOR3Q9UHA4 124 aa10.34□□□□□ -0.75
SPSB3-201ENST00000301717 IGLV5-48A0A075B6I7 105 aa10.33□□□□□ -0.76
SPSB3-201ENST00000301717 VAMP3Q15836 100 aa10.33□□□□□ -0.76
SPSB3-201ENST00000301717 HRCT1Q6UXD1 115 aa10.33□□□□□ -0.76
SPSB3-201ENST00000301717 RAB37Q96AX2 223 aa10.33□□□□□ -0.76
SPSB3-201ENST00000301717 NHP2Q9NX24 153 aaKnown RBP10.33□□□□□ -0.76
SPSB3-201ENST00000301717 IGLV7-46A0A075B6I9 117 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms