RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 IGLV6-57P01721 117 aa6.1□□□□□ -1.43
PRDM9-201ENST00000296682 CCKP06307 115 aa6.1□□□□□ -1.43
PRDM9-201ENST00000296682 C9orf153Q5TBE3 101 aa6.1□□□□□ -1.43
PRDM9-201ENST00000296682 KRTAP26-1Q6PEX3 210 aa6.1□□□□□ -1.43
PRDM9-201ENST00000296682 TRBV7-7A0A0K0K1E9 115 aa6.1□□□□□ -1.43
PRDM9-201ENST00000296682 CHTF8P0CG12 524 aa6.1□□□□□ -1.43
PRDM9-201ENST00000296682 DNAH10OSP0CZ25 163 aa6.09□□□□□ -1.43
PRDM9-201ENST00000296682 TM2D3Q9BRN9 247 aa6.09□□□□□ -1.43
PRDM9-201ENST00000296682 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.09□□□□□ -1.43
PRDM9-201ENST00000296682 TGP01266 2768 aa6.09□□□□□ -1.43
PRDM9-201ENST00000296682 C2orf48Q96LS8 159 aa6.09□□□□□ -1.44
PRDM9-201ENST00000296682 A0A0G2JQZ4 141 aa6.08□□□□□ -1.44
PRDM9-201ENST00000296682 A0A1W2PNN7 141 aa6.08□□□□□ -1.44
PRDM9-201ENST00000296682 ST20-AS1Q8NBB2 130 aa6.07□□□□□ -1.44
PRDM9-201ENST00000296682 PRLHP81277 87 aa6.07□□□□□ -1.44
PRDM9-201ENST00000296682 C5orf47Q569G3 176 aa6.07□□□□□ -1.44
PRDM9-201ENST00000296682 Q8N9L7 120 aa6.07□□□□□ -1.44
PRDM9-201ENST00000296682 F8WDY8 70 aa6.06□□□□□ -1.44
PRDM9-201ENST00000296682 IMUPQ9GZP8 106 aa6.06□□□□□ -1.44
PRDM9-201ENST00000296682 UPK3BQ9BT76 320 aa6.06□□□□□ -1.44
PRDM9-201ENST00000296682 KRTAP1-5Q9BYS1 174 aa6.05□□□□□ -1.44
PRDM9-201ENST00000296682 SEC61GP60059 68 aa6.05□□□□□ -1.44
PRDM9-201ENST00000296682 GHRHP01286 108 aa6.04□□□□□ -1.44
PRDM9-201ENST00000296682 HUWE1Q7Z6Z7 4374 aaKnown RBP6.04□□□□□ -1.44
PRDM9-201ENST00000296682 ELOF1P60002 83 aaKnown RBP6.04□□□□□ -1.44
PRDM9-201ENST00000296682 MRPL55Q7Z7F7 128 aaKnown RBP6.04□□□□□ -1.44
PRDM9-201ENST00000296682 NREPQ16612 68 aa6.04□□□□□ -1.44
PRDM9-201ENST00000296682 LOC107984640A0A0U1RRK4 108 aa6.03□□□□□ -1.44
PRDM9-201ENST00000296682 DEFB116Q30KQ4 102 aa6.03□□□□□ -1.44
PRDM9-201ENST00000296682 SRRM2Q9UQ35 2752 aaKnown RBP6.02□□□□□ -1.45
PRDM9-201ENST00000296682 Q6ZVQ6 151 aa6.02□□□□□ -1.45
PRDM9-201ENST00000296682 TRBV7-6A0A0J9YX20 115 aa6.02□□□□□ -1.45
PRDM9-201ENST00000296682 F8WEM9 126 aa6.02□□□□□ -1.45
PRDM9-201ENST00000296682 Q6ZQT0 140 aa6.02□□□□□ -1.45
PRDM9-201ENST00000296682 J3KT08 172 aa6.01□□□□□ -1.45
PRDM9-201ENST00000296682 ERC2-IT1O76042 136 aa6.01□□□□□ -1.45
PRDM9-201ENST00000296682 PHF5AQ7RTV0 110 aaKnown RBP6.01□□□□□ -1.45
PRDM9-201ENST00000296682 LINC00528Q8N1L1 170 aa6.01□□□□□ -1.45
PRDM9-201ENST00000296682 COL7A1Q02388 2944 aa6□□□□□ -1.45
PRDM9-201ENST00000296682 Q6JHZ5 121 aa6□□□□□ -1.45
PRDM9-201ENST00000296682 LY6G6CO95867 125 aa6□□□□□ -1.45
PRDM9-201ENST00000296682 UBE2AP49459 152 aa6□□□□□ -1.45
PRDM9-201ENST00000296682 C20orf197Q8N268 126 aa6□□□□□ -1.45
PRDM9-201ENST00000296682 ATOX1O00244 68 aa5.99□□□□□ -1.45
PRDM9-201ENST00000296682 LINC01547P58512 204 aaPredicted RBP5.99□□□□□ -1.45
PRDM9-201ENST00000296682 REG3GQ6UW15 175 aa5.99□□□□□ -1.45
PRDM9-201ENST00000296682 LYSTQ99698 3801 aa5.98□□□□□ -1.45
PRDM9-201ENST00000296682 H3BQ85 93 aa5.97□□□□□ -1.45
PRDM9-201ENST00000296682 BPY2O14599 106 aa5.97□□□□□ -1.45
PRDM9-201ENST00000296682 UQCRQO14949 82 aa5.97□□□□□ -1.45
PRDM9-201ENST00000296682 C1orf137Q5JT78 98 aa5.97□□□□□ -1.45
PRDM9-201ENST00000296682 Q8N377 158 aa5.97□□□□□ -1.45
PRDM9-201ENST00000296682 B9D2Q9BPU9 175 aa5.97□□□□□ -1.45
PRDM9-201ENST00000296682 IGLV1-50A0A075B6I6 118 aa5.97□□□□□ -1.45
PRDM9-201ENST00000296682 Q6ZRX8 168 aa5.97□□□□□ -1.45
PRDM9-201ENST00000296682 APLNQ9ULZ1 77 aa5.97□□□□□ -1.45
PRDM9-201ENST00000296682 SNURFQ9Y675 71 aa5.97□□□□□ -1.45
PRDM9-201ENST00000296682 DNAH7Q8WXX0 4024 aa5.97□□□□□ -1.45
PRDM9-201ENST00000296682 KCNQ1DNQ9H478 68 aa5.96□□□□□ -1.45
PRDM9-201ENST00000296682 HRCT1Q6UXD1 115 aa5.96□□□□□ -1.46
PRDM9-201ENST00000296682 Q9BRP9 147 aa5.96□□□□□ -1.46
PRDM9-201ENST00000296682 DHRS4-AS1Q9P1J3 65 aa5.96□□□□□ -1.46
PRDM9-201ENST00000296682 PLA2G2DQ9UNK4 145 aa5.96□□□□□ -1.46
PRDM9-201ENST00000296682 PDE6GP18545 87 aa5.95□□□□□ -1.46
PRDM9-201ENST00000296682 LOC110117498A0A087WWA1 95 aa5.95□□□□□ -1.46
PRDM9-201ENST00000296682 NBDYA0A0U1RRE5 68 aa5.95□□□□□ -1.46
PRDM9-201ENST00000296682 TLX1NBP0CAT3 122 aa5.95□□□□□ -1.46
PRDM9-201ENST00000296682 COX7CP15954 63 aa5.95□□□□□ -1.46
PRDM9-201ENST00000296682 PRKDCP78527 4128 aaKnown RBP5.94□□□□□ -1.46
PRDM9-201ENST00000296682 DNAH9Q9NYC9 4486 aa5.93□□□□□ -1.46
PRDM9-201ENST00000296682 NUPR2A6NF83 97 aa5.93□□□□□ -1.46
PRDM9-201ENST00000296682 IGLV5-37A0A075B6J1 123 aa5.93□□□□□ -1.46
PRDM9-201ENST00000296682 IGLV9-49A0A0B4J1Y8 123 aa5.93□□□□□ -1.46
PRDM9-201ENST00000296682 KRTAP7-1Q8IUC3 87 aa5.93□□□□□ -1.46
PRDM9-201ENST00000296682 SERP2Q8N6R1 65 aa5.93□□□□□ -1.46
PRDM9-201ENST00000296682 PRYO14603 147 aa5.92□□□□□ -1.46
PRDM9-201ENST00000296682 C14orf177Q52M58 125 aa5.92□□□□□ -1.46
PRDM9-201ENST00000296682 C16orf90A8MZG2 172 aa5.92□□□□□ -1.46
PRDM9-201ENST00000296682 V9GYY9 64 aa5.92□□□□□ -1.46
PRDM9-201ENST00000296682 A0A087WSZ3 146 aa5.91□□□□□ -1.46
PRDM9-201ENST00000296682 TRBV7-4A0A0J9YYF1 115 aa5.9□□□□□ -1.46
PRDM9-201ENST00000296682 LRCOL1A6NCL2 159 aa5.9□□□□□ -1.47
PRDM9-201ENST00000296682 EPM2AB3EWF7 344 aa5.9□□□□□ -1.47
PRDM9-201ENST00000296682 PANO1I0J062 215 aa5.89□□□□□ -1.47
PRDM9-201ENST00000296682 RPS28P62857 69 aaKnown RBP5.89□□□□□ -1.47
PRDM9-201ENST00000296682 ATP5EP2Q5VTU8 51 aa5.89□□□□□ -1.47
PRDM9-201ENST00000296682 WFDC13Q8IUB5 93 aa5.89□□□□□ -1.47
PRDM9-201ENST00000296682 CYSTM1Q9H1C7 97 aa5.89□□□□□ -1.47
PRDM9-201ENST00000296682 ANAPC11Q9NYG5 84 aa5.89□□□□□ -1.47
PRDM9-201ENST00000296682 FAM30AQ9NZY2 134 aa5.89□□□□□ -1.47
PRDM9-201ENST00000296682 DNAH6Q9C0G6 4158 aa5.88□□□□□ -1.47
PRDM9-201ENST00000296682 LINC00476Q8WZB0 136 aa5.88□□□□□ -1.47
PRDM9-201ENST00000296682 KRTAP4-16G5E9R7 235 aaPredicted RBP5.88□□□□□ -1.47
PRDM9-201ENST00000296682 A0A1W2PNM2 257 aa5.88□□□□□ -1.47
PRDM9-201ENST00000296682 C4orf48Q5BLP8 95 aa5.88□□□□□ -1.47
PRDM9-201ENST00000296682 KRTAP11-1Q8IUC1 163 aa5.88□□□□□ -1.47
PRDM9-201ENST00000296682 BCE1O60756 84 aa5.87□□□□□ -1.47
PRDM9-201ENST00000296682 SPRR1AP35321 89 aa5.87□□□□□ -1.47
PRDM9-201ENST00000296682 RPL37AP61513 92 aaKnown RBP5.87□□□□□ -1.47
PRDM9-201ENST00000296682 CRYGAP11844 174 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms