RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 IGLV7-43P04211 117 aa8.22□□□□□ -1.09
SLX4-201ENST00000294008 KRTAP10-11P60412 298 aa8.21□□□□□ -1.09
SLX4-201ENST00000294008 A0A1B0GW54 56 aa8.21□□□□□ -1.1
SLX4-201ENST00000294008 Q5VSD8 79 aa8.21□□□□□ -1.1
SLX4-201ENST00000294008 A0A096LNJ9 63 aa8.21□□□□□ -1.1
SLX4-201ENST00000294008 CYP4F30PQ9H0H9 118 aa8.2□□□□□ -1.1
SLX4-201ENST00000294008 JMJD1CQ15652 2540 aa8.2□□□□□ -1.1
SLX4-201ENST00000294008 LINC00310P59036 64 aa8.19□□□□□ -1.1
SLX4-201ENST00000294008 Q1T7F1 81 aa8.17□□□□□ -1.1
SLX4-201ENST00000294008 HRES1P13985 223 aa8.15□□□□□ -1.1
SLX4-201ENST00000294008 ZFYVE26Q68DK2 2539 aa8.15□□□□□ -1.11
SLX4-201ENST00000294008 CPAMD8Q8IZJ3 1885 aa8.14□□□□□ -1.11
SLX4-201ENST00000294008 PTPRBP23467 1997 aa8.12□□□□□ -1.11
SLX4-201ENST00000294008 H1FX-AS1Q4G0G2 97 aa8.11□□□□□ -1.11
SLX4-201ENST00000294008 LCA10Q71F78 164 aa8.11□□□□□ -1.11
SLX4-201ENST00000294008 C9orf163Q8N9P6 203 aa8.11□□□□□ -1.11
SLX4-201ENST00000294008 S4R3F8 94 aa8.11□□□□□ -1.11
SLX4-201ENST00000294008 TLN2Q9Y4G6 2542 aa8.1□□□□□ -1.11
SLX4-201ENST00000294008 UTRNP46939 3433 aa8.1□□□□□ -1.11
SLX4-201ENST00000294008 A0A0A0MQY5 61 aa8.1□□□□□ -1.11
SLX4-201ENST00000294008 COL27A1Q8IZC6 1860 aaPredicted RBP8.09□□□□□ -1.11
SLX4-201ENST00000294008 LINC00612Q8N6U2 182 aa8.08□□□□□ -1.12
SLX4-201ENST00000294008 SMCPP49901 116 aaPredicted RBP8.08□□□□□ -1.12
SLX4-201ENST00000294008 SPINK7P58062 85 aa8.07□□□□□ -1.12
SLX4-201ENST00000294008 CENPFP49454 3210 aa8.07□□□□□ -1.12
SLX4-201ENST00000294008 LITAFQ99732 161 aa8.07□□□□□ -1.12
SLX4-201ENST00000294008 KCNQ1DNQ9H478 68 aa8.07□□□□□ -1.12
SLX4-201ENST00000294008 MUC22E2RYF6 1773 aaPredicted RBP8.07□□□□□ -1.12
SLX4-201ENST00000294008 A0A1B0GU33 70 aa8.06□□□□□ -1.12
SLX4-201ENST00000294008 R4GN34 69 aa8.06□□□□□ -1.12
SLX4-201ENST00000294008 Q8N377 158 aa8.06□□□□□ -1.12
SLX4-201ENST00000294008 COX8CQ7Z4L0 72 aa8.05□□□□□ -1.12
SLX4-201ENST00000294008 PIEZO2Q9H5I5 2752 aa8.05□□□□□ -1.12
SLX4-201ENST00000294008 CASC10Q5T4H9 136 aa8.04□□□□□ -1.12
SLX4-201ENST00000294008 SPRR4Q96PI1 79 aa8.04□□□□□ -1.12
SLX4-201ENST00000294008 TNP2Q05952 138 aa8.04□□□□□ -1.12
SLX4-201ENST00000294008 CSAG1Q6PB30 78 aa8.04□□□□□ -1.12
SLX4-201ENST00000294008 PIEZO1Q92508 2521 aa8.01□□□□□ -1.13
SLX4-201ENST00000294008 ZNF462Q96JM2 2506 aa7.99□□□□□ -1.13
SLX4-201ENST00000294008 DNAH12Q6ZR08 3092 aa7.98□□□□□ -1.13
SLX4-201ENST00000294008 ABCA12Q86UK0 2595 aa7.97□□□□□ -1.13
SLX4-201ENST00000294008 IGF2RP11717 2491 aa7.95□□□□□ -1.14
SLX4-201ENST00000294008 NCOR2Q9Y618 2525 aa7.94□□□□□ -1.14
SLX4-201ENST00000294008 LINC01546A6NGU7 62 aa7.92□□□□□ -1.14
SLX4-201ENST00000294008 KRTAP10-3P60369 221 aa7.91□□□□□ -1.14
SLX4-201ENST00000294008 M0QZ58 72 aa7.9□□□□□ -1.14
SLX4-201ENST00000294008 C19orf73Q9NVV2 129 aa7.9□□□□□ -1.14
SLX4-201ENST00000294008 SEC61BP60468 96 aaKnown RBP7.9□□□□□ -1.15
SLX4-201ENST00000294008 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.88□□□□□ -1.15
SLX4-201ENST00000294008 DMAC1Q96GE9 116 aa7.87□□□□□ -1.15
SLX4-201ENST00000294008 PRO0461Q9UI25 63 aa7.87□□□□□ -1.15
SLX4-201ENST00000294008 PKD1L2Q7Z442 2459 aa7.87□□□□□ -1.15
SLX4-201ENST00000294008 PRAC1Q96KF2 57 aa7.86□□□□□ -1.15
SLX4-201ENST00000294008 PCNTO95613 3336 aa7.84□□□□□ -1.15
SLX4-201ENST00000294008 H3BS24 57 aa7.84□□□□□ -1.15
SLX4-201ENST00000294008 C10orf142B7Z368 130 aa7.83□□□□□ -1.16
SLX4-201ENST00000294008 H7BZZ5 65 aa7.83□□□□□ -1.16
SLX4-201ENST00000294008 A0A1W2PNM2 257 aa7.82□□□□□ -1.16
SLX4-201ENST00000294008 ZCCHC13Q8WW36 166 aaKnown RBP7.82□□□□□ -1.16
SLX4-201ENST00000294008 EIF4EBP3O60516 100 aaPredicted RBP7.81□□□□□ -1.16
SLX4-201ENST00000294008 PRR34Q9NV39 138 aa7.81□□□□□ -1.16
SLX4-201ENST00000294008 USP9XQ93008 2570 aaPredicted RBP7.8□□□□□ -1.16
SLX4-201ENST00000294008 CR1P17927 2039 aa7.79□□□□□ -1.16
SLX4-201ENST00000294008 GIG44P09565 113 aaPredicted RBP7.79□□□□□ -1.16
SLX4-201ENST00000294008 FLG2Q5D862 2391 aaPredicted RBP7.79□□□□□ -1.16
SLX4-201ENST00000294008 CNBPP62633 177 aaKnown RBP7.78□□□□□ -1.16
SLX4-201ENST00000294008 KLKP1Q107X0 134 aa7.78□□□□□ -1.16
SLX4-201ENST00000294008 SPANXA2-OT1Q8N9U9 137 aa7.77□□□□□ -1.17
SLX4-201ENST00000294008 Q8N9P0 234 aaPredicted RBP7.76□□□□□ -1.17
SLX4-201ENST00000294008 COL4A2P08572 1712 aa7.76□□□□□ -1.17
SLX4-201ENST00000294008 C20orf166-AS1Q96NR2 134 aa7.76□□□□□ -1.17
SLX4-201ENST00000294008 CEP350Q5VT06 3117 aa7.75□□□□□ -1.17
SLX4-201ENST00000294008 ADM2Q7Z4H4 148 aa7.74□□□□□ -1.17
SLX4-201ENST00000294008 SETD2Q9BYW2 2564 aaPredicted RBP7.73□□□□□ -1.17
SLX4-201ENST00000294008 PCSK5Q92824 1860 aa7.73□□□□□ -1.17
SLX4-201ENST00000294008 C5orf42Q9H799 3197 aa7.69□□□□□ -1.18
SLX4-201ENST00000294008 KLK9Q2XQG4 91 aa7.69□□□□□ -1.18
SLX4-201ENST00000294008 ROMO1P60602 79 aa7.67□□□□□ -1.18
SLX4-201ENST00000294008 FP248Q71RG6 208 aaPredicted RBP7.64□□□□□ -1.19
SLX4-201ENST00000294008 RPL37P61927 97 aaKnown RBP7.64□□□□□ -1.19
SLX4-201ENST00000294008 SPATA8Q6RVD6 105 aa7.63□□□□□ -1.19
SLX4-201ENST00000294008 Q5W150 140 aa7.63□□□□□ -1.19
SLX4-201ENST00000294008 ANKRD17O75179 2603 aaKnown RBP7.62□□□□□ -1.19
SLX4-201ENST00000294008 FAM229BQ4G0N7 80 aa7.61□□□□□ -1.19
SLX4-201ENST00000294008 MTORP42345 2549 aa7.61□□□□□ -1.19
SLX4-201ENST00000294008 POLQO75417 2590 aa7.61□□□□□ -1.19
SLX4-201ENST00000294008 Q75L30 129 aa7.59□□□□□ -1.19
SLX4-201ENST00000294008 Q8NDZ9 215 aa7.57□□□□□ -1.2
SLX4-201ENST00000294008 CHD8Q9HCK8 2581 aa7.56□□□□□ -1.2
SLX4-201ENST00000294008 OXTP01178 125 aa7.55□□□□□ -1.2
SLX4-201ENST00000294008 LINC01558Q9Y6Z2 57 aa7.54□□□□□ -1.2
SLX4-201ENST00000294008 ANKRD11Q6UB99 2663 aaPredicted RBP7.53□□□□□ -1.2
SLX4-201ENST00000294008 PRRC2CQ9Y520 2896 aaKnown RBP7.53□□□□□ -1.2
SLX4-201ENST00000294008 SPTBN4Q9H254 2564 aa7.53□□□□□ -1.2
SLX4-201ENST00000294008 MMP24-AS1A0A0U1RRL7 71 aa7.53□□□□□ -1.2
SLX4-201ENST00000294008 OCR1Q9BZK8 76 aa7.53□□□□□ -1.2
SLX4-201ENST00000294008 PLAC8Q9NZF1 115 aa7.53□□□□□ -1.2
SLX4-201ENST00000294008 USP24Q9UPU5 2620 aa7.51□□□□□ -1.21
SLX4-201ENST00000294008 KRTAP10-1P60331 282 aa7.49□□□□□ -1.21
SLX4-201ENST00000294008 USP9YO00507 2555 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms