RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 PKD1L1Q8TDX9 2849 aa10.63□□□□□ -0.71
SMAD6-201ENST00000288840 Q6ZRP5 223 aa10.62□□□□□ -0.71
SMAD6-201ENST00000288840 MPLKIPQ8TAP9 179 aa10.62□□□□□ -0.71
SMAD6-201ENST00000288840 LINC01600Q96MT4 127 aa10.62□□□□□ -0.71
SMAD6-201ENST00000288840 PRO0628Q9UI54 55 aa10.62□□□□□ -0.71
SMAD6-201ENST00000288840 PDE6GP18545 87 aa10.61□□□□□ -0.71
SMAD6-201ENST00000288840 KRTAP24-1Q3LI83 254 aa10.61□□□□□ -0.71
SMAD6-201ENST00000288840 TENM3Q9P273 2699 aa10.61□□□□□ -0.71
SMAD6-201ENST00000288840 ATP5EP2Q5VTU8 51 aa10.61□□□□□ -0.71
SMAD6-201ENST00000288840 Q6ZQT0 140 aa10.6□□□□□ -0.71
SMAD6-201ENST00000288840 RMI2Q96E14 147 aa10.59□□□□□ -0.71
SMAD6-201ENST00000288840 PRR34Q9NV39 138 aa10.59□□□□□ -0.71
SMAD6-201ENST00000288840 TMEM258P61165 79 aa10.59□□□□□ -0.71
SMAD6-201ENST00000288840 FAM168BA1KXE4 195 aa10.58□□□□□ -0.72
SMAD6-201ENST00000288840 IGLV6-57P01721 117 aa10.58□□□□□ -0.72
SMAD6-201ENST00000288840 C2orf48Q96LS8 159 aa10.58□□□□□ -0.72
SMAD6-201ENST00000288840 TRAV10A0A0B4J240 114 aa10.57□□□□□ -0.72
SMAD6-201ENST00000288840 DEFB116Q30KQ4 102 aa10.57□□□□□ -0.72
SMAD6-201ENST00000288840 C7orf33Q8WU49 177 aa10.57□□□□□ -0.72
SMAD6-201ENST00000288840 KMT2BQ9UMN6 2715 aaPredicted RBP10.56□□□□□ -0.72
SMAD6-201ENST00000288840 VPREB1P12018 145 aa10.56□□□□□ -0.72
SMAD6-201ENST00000288840 SERTAD4-AS1Q5TG53 156 aa10.55□□□□□ -0.72
SMAD6-201ENST00000288840 TRRAPQ9Y4A5 3859 aa10.55□□□□□ -0.72
SMAD6-201ENST00000288840 LINC00336Q6ZUF6 198 aa10.54□□□□□ -0.72
SMAD6-201ENST00000288840 C15orf56Q8N910 161 aa10.54□□□□□ -0.72
SMAD6-201ENST00000288840 STAB2Q8WWQ8 2551 aa10.54□□□□□ -0.72
SMAD6-201ENST00000288840 CASC10Q5T4H9 136 aa10.54□□□□□ -0.72
SMAD6-201ENST00000288840 ST20-AS1Q8NBB2 130 aa10.53□□□□□ -0.72
SMAD6-201ENST00000288840 CYSTM1Q9H1C7 97 aa10.53□□□□□ -0.72
SMAD6-201ENST00000288840 ELOF1P60002 83 aaKnown RBP10.52□□□□□ -0.72
SMAD6-201ENST00000288840 A0A0G2JQZ4 141 aa10.51□□□□□ -0.73
SMAD6-201ENST00000288840 A0A1W2PNN7 141 aa10.51□□□□□ -0.73
SMAD6-201ENST00000288840 WIPF1O43516 503 aa10.51□□□□□ -0.73
SMAD6-201ENST00000288840 CRYGAP11844 174 aa10.51□□□□□ -0.73
SMAD6-201ENST00000288840 PRR4Q16378 134 aa10.51□□□□□ -0.73
SMAD6-201ENST00000288840 FAM30AQ9NZY2 134 aa10.51□□□□□ -0.73
SMAD6-201ENST00000288840 H3BQ85 93 aa10.5□□□□□ -0.73
SMAD6-201ENST00000288840 PRLHP81277 87 aa10.5□□□□□ -0.73
SMAD6-201ENST00000288840 LINC01556Q5JQF7 62 aa10.5□□□□□ -0.73
SMAD6-201ENST00000288840 C1orf137Q5JT78 98 aa10.5□□□□□ -0.73
SMAD6-201ENST00000288840 C4orf48Q5BLP8 95 aa10.49□□□□□ -0.73
SMAD6-201ENST00000288840 LINC00167Q96N53 147 aa10.49□□□□□ -0.73
SMAD6-201ENST00000288840 LINC00588Q9Y4M8 146 aa10.49□□□□□ -0.73
SMAD6-201ENST00000288840 OBSCN-AS1Q96MR7 158 aa10.49□□□□□ -0.73
SMAD6-201ENST00000288840 TM2D3Q9BRN9 247 aa10.48□□□□□ -0.73
SMAD6-201ENST00000288840 TRAV7A0A075B6U4 112 aa10.47□□□□□ -0.73
SMAD6-201ENST00000288840 WFDC13Q8IUB5 93 aa10.46□□□□□ -0.73
SMAD6-201ENST00000288840 GVQW2A0A096LPI5 108 aaPredicted RBP10.46□□□□□ -0.73
SMAD6-201ENST00000288840 UBE2AP49459 152 aa10.46□□□□□ -0.74
SMAD6-201ENST00000288840 LRCOL1A6NCL2 159 aa10.44□□□□□ -0.74
SMAD6-201ENST00000288840 DHRS4-AS1Q9P1J3 65 aa10.44□□□□□ -0.74
SMAD6-201ENST00000288840 LOC110117498A0A087WWA1 95 aa10.43□□□□□ -0.74
SMAD6-201ENST00000288840 LINC00528Q8N1L1 170 aa10.43□□□□□ -0.74
SMAD6-201ENST00000288840 PMAIP1Q13794 54 aa10.41□□□□□ -0.74
SMAD6-201ENST00000288840 SPTSSBQ8NFR3 76 aa10.41□□□□□ -0.74
SMAD6-201ENST00000288840 CHTF8P0CG12 524 aa10.4□□□□□ -0.74
SMAD6-201ENST00000288840 RPS28P62857 69 aaKnown RBP10.4□□□□□ -0.74
SMAD6-201ENST00000288840 H3BNG1 76 aa10.39□□□□□ -0.75
SMAD6-201ENST00000288840 REG3GQ6UW15 175 aa10.39□□□□□ -0.75
SMAD6-201ENST00000288840 AKAP9Q99996 3911 aa10.38□□□□□ -0.75
SMAD6-201ENST00000288840 A0A087WSZ3 146 aa10.37□□□□□ -0.75
SMAD6-201ENST00000288840 Q8N377 158 aa10.37□□□□□ -0.75
SMAD6-201ENST00000288840 H0Y9J4 135 aa10.37□□□□□ -0.75
SMAD6-201ENST00000288840 CXCL6P80162 114 aa10.37□□□□□ -0.75
SMAD6-201ENST00000288840 TMEM254Q8TBM7 123 aa10.36□□□□□ -0.75
SMAD6-201ENST00000288840 Q6ZRX8 168 aa10.36□□□□□ -0.75
SMAD6-201ENST00000288840 ERC2-IT1O76042 136 aa10.36□□□□□ -0.75
SMAD6-201ENST00000288840 TRBV7-4A0A0J9YYF1 115 aa10.35□□□□□ -0.75
SMAD6-201ENST00000288840 SMIM29Q86T20 159 aa10.35□□□□□ -0.75
SMAD6-201ENST00000288840 DNAH10OSP0CZ25 163 aa10.34□□□□□ -0.75
SMAD6-201ENST00000288840 NDUFS5O43920 106 aa10.32□□□□□ -0.76
SMAD6-201ENST00000288840 IGLV9-49A0A0B4J1Y8 123 aa10.32□□□□□ -0.76
SMAD6-201ENST00000288840 K7EIL1 84 aa10.31□□□□□ -0.76
SMAD6-201ENST00000288840 KCNQ1DNQ9H478 68 aa10.31□□□□□ -0.76
SMAD6-201ENST00000288840 PRYO14603 147 aa10.31□□□□□ -0.76
SMAD6-201ENST00000288840 PHF5AQ7RTV0 110 aaKnown RBP10.31□□□□□ -0.76
SMAD6-201ENST00000288840 TRBV7-6A0A0J9YX20 115 aa10.3□□□□□ -0.76
SMAD6-201ENST00000288840 SERP1Q9Y6X1 66 aa10.29□□□□□ -0.76
SMAD6-201ENST00000288840 TENM2Q9NT68 2774 aa10.29□□□□□ -0.76
SMAD6-201ENST00000288840 H3BS24 57 aa10.29□□□□□ -0.76
SMAD6-201ENST00000288840 IGLV1-50A0A075B6I6 118 aa10.29□□□□□ -0.76
SMAD6-201ENST00000288840 SMIM26A0A096LP01 95 aa10.29□□□□□ -0.76
SMAD6-201ENST00000288840 Q9BRP9 147 aa10.29□□□□□ -0.76
SMAD6-201ENST00000288840 RPL37AP61513 92 aaKnown RBP10.28□□□□□ -0.76
SMAD6-201ENST00000288840 KRTAP26-1Q6PEX3 210 aa10.28□□□□□ -0.76
SMAD6-201ENST00000288840 LINC00476Q8WZB0 136 aa10.28□□□□□ -0.76
SMAD6-201ENST00000288840 CDK2AP2O75956 126 aa10.26□□□□□ -0.77
SMAD6-201ENST00000288840 ANK3Q12955 4377 aaKnown RBP10.25□□□□□ -0.77
SMAD6-201ENST00000288840 B9D2Q9BPU9 175 aa10.25□□□□□ -0.77
SMAD6-201ENST00000288840 A0A1W2PNM2 257 aa10.25□□□□□ -0.77
SMAD6-201ENST00000288840 MP68P56378 58 aa10.25□□□□□ -0.77
SMAD6-201ENST00000288840 Q8NBF4 154 aa10.25□□□□□ -0.77
SMAD6-201ENST00000288840 OXTP01178 125 aa10.24□□□□□ -0.77
SMAD6-201ENST00000288840 H7BZZ5 65 aa10.24□□□□□ -0.77
SMAD6-201ENST00000288840 K7EQZ3 153 aa10.24□□□□□ -0.77
SMAD6-201ENST00000288840 LINC00474Q9P2X8 69 aa10.24□□□□□ -0.77
SMAD6-201ENST00000288840 IGKV4-1P06312 121 aa10.22□□□□□ -0.77
SMAD6-201ENST00000288840 LINC00208Q96KT6 92 aa10.22□□□□□ -0.77
SMAD6-201ENST00000288840 C14orf177Q52M58 125 aa10.21□□□□□ -0.78
SMAD6-201ENST00000288840 SPINK6Q6UWN8 80 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms