RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 ETDCA0A1B0GVM5 59 aa12.03□□□□□ -0.48
RAB28-201ENST00000288723 C20orf202A1L168 122 aa12.03□□□□□ -0.48
RAB28-201ENST00000288723 NDUFC2O95298 119 aa12.03□□□□□ -0.48
RAB28-201ENST00000288723 TSPAN13O95857 204 aa12.03□□□□□ -0.48
RAB28-201ENST00000288723 JOSD1Q15040 202 aaPredicted RBP12.02□□□□□ -0.48
RAB28-201ENST00000288723 FAM229BQ4G0N7 80 aa12.02□□□□□ -0.48
RAB28-201ENST00000288723 ANKRD39Q53RE8 183 aa12.01□□□□□ -0.49
RAB28-201ENST00000288723 S100A7L2Q5SY68 101 aa12.01□□□□□ -0.49
RAB28-201ENST00000288723 LINC00308Q8TCZ7 52 aa12□□□□□ -0.49
RAB28-201ENST00000288723 TIMM17BO60830 172 aa12□□□□□ -0.49
RAB28-201ENST00000288723 SMCR5Q8TEV8 140 aa12□□□□□ -0.49
RAB28-201ENST00000288723 PRO1933Q9H354 126 aa12□□□□□ -0.49
RAB28-201ENST00000288723 IGLV6-57P01721 117 aa11.99□□□□□ -0.49
RAB28-201ENST00000288723 HIST1H2BLQ99880 126 aa11.99□□□□□ -0.49
RAB28-201ENST00000288723 B5MCH6 92 aa11.98□□□□□ -0.49
RAB28-201ENST00000288723 SPRR4Q96PI1 79 aa11.98□□□□□ -0.49
RAB28-201ENST00000288723 LPAP08519 4548 aa11.97□□□□□ -0.49
RAB28-201ENST00000288723 C3orf22Q8N5N4 141 aa11.96□□□□□ -0.49
RAB28-201ENST00000288723 TRAV23DV6A0A075B6W5 121 aa11.95□□□□□ -0.5
RAB28-201ENST00000288723 SCGB1D4Q6XE38 83 aa11.95□□□□□ -0.5
RAB28-201ENST00000288723 PPDPFQ9H3Y8 114 aa11.95□□□□□ -0.5
RAB28-201ENST00000288723 SPANXCQ9NY87 97 aa11.95□□□□□ -0.5
RAB28-201ENST00000288723 ERC2-IT1O76042 136 aa11.94□□□□□ -0.5
RAB28-201ENST00000288723 PRR4Q16378 134 aa11.94□□□□□ -0.5
RAB28-201ENST00000288723 ZNF706Q9Y5V0 76 aaPredicted RBP11.94□□□□□ -0.5
RAB28-201ENST00000288723 PCP2Q8IVA1 136 aa11.93□□□□□ -0.5
RAB28-201ENST00000288723 M0R143 59 aa11.93□□□□□ -0.5
RAB28-201ENST00000288723 Q9BRP9 147 aa11.93□□□□□ -0.5
RAB28-201ENST00000288723 Q6ZRX8 168 aa11.92□□□□□ -0.5
RAB28-201ENST00000288723 LINC00304Q8N9R0 145 aa11.92□□□□□ -0.5
RAB28-201ENST00000288723 OR13C6PQ8NH95 151 aa11.92□□□□□ -0.5
RAB28-201ENST00000288723 ZNF73O43830 326 aaPredicted RBP11.9□□□□□ -0.5
RAB28-201ENST00000288723 GAGE2AQ6NT46 116 aa11.89□□□□□ -0.51
RAB28-201ENST00000288723 SPANXDQ9BXN6 97 aa11.89□□□□□ -0.51
RAB28-201ENST00000288723 RNF213Q63HN8 5207 aa11.88□□□□□ -0.51
RAB28-201ENST00000288723 SNHG12Q9BXW3 62 aa11.88□□□□□ -0.51
RAB28-201ENST00000288723 DLEU1O43261 78 aa11.86□□□□□ -0.51
RAB28-201ENST00000288723 LINC00483Q53H64 154 aa11.84□□□□□ -0.51
RAB28-201ENST00000288723 RETNLBQ9BQ08 111 aa11.84□□□□□ -0.51
RAB28-201ENST00000288723 PCP4P48539 62 aa11.83□□□□□ -0.51
RAB28-201ENST00000288723 MUSTN1Q8IVN3 82 aa11.83□□□□□ -0.51
RAB28-201ENST00000288723 HINT1P49773 126 aaPredicted RBP11.82□□□□□ -0.52
RAB28-201ENST00000288723 HSBP1L1C9JCN9 74 aa11.81□□□□□ -0.52
RAB28-201ENST00000288723 IFITM1P13164 125 aa11.81□□□□□ -0.52
RAB28-201ENST00000288723 ST20-AS1Q8NBB2 130 aa11.81□□□□□ -0.52
RAB28-201ENST00000288723 IGLV9-49A0A0B4J1Y8 123 aa11.8□□□□□ -0.52
RAB28-201ENST00000288723 Q8NBF4 154 aa11.8□□□□□ -0.52
RAB28-201ENST00000288723 Q6ZVH6 145 aa11.79□□□□□ -0.52
RAB28-201ENST00000288723 COPS9Q8WXC6 57 aa11.79□□□□□ -0.52
RAB28-201ENST00000288723 SCGB1D1O95968 90 aa11.79□□□□□ -0.52
RAB28-201ENST00000288723 C6orf99Q4VX62 202 aa11.78□□□□□ -0.52
RAB28-201ENST00000288723 A6NDN8 102 aa11.76□□□□□ -0.53
RAB28-201ENST00000288723 MOBPQ13875 183 aa11.76□□□□□ -0.53
RAB28-201ENST00000288723 C4orf48Q5BLP8 95 aa11.75□□□□□ -0.53
RAB28-201ENST00000288723 SPAG11AQ6PDA7 123 aa11.75□□□□□ -0.53
RAB28-201ENST00000288723 COX7BP24311 80 aa11.74□□□□□ -0.53
RAB28-201ENST00000288723 ELOF1P60002 83 aaKnown RBP11.74□□□□□ -0.53
RAB28-201ENST00000288723 C21orf62-AS1Q17RA5 79 aa11.74□□□□□ -0.53
RAB28-201ENST00000288723 DHRS4-AS1Q9P1J3 65 aa11.72□□□□□ -0.53
RAB28-201ENST00000288723 COL5A1-AS1Q5SY13 56 aa11.7□□□□□ -0.54
RAB28-201ENST00000288723 C9orf153Q5TBE3 101 aa11.69□□□□□ -0.54
RAB28-201ENST00000288723 SSBP3-AS1Q7Z2R9 100 aa11.69□□□□□ -0.54
RAB28-201ENST00000288723 TRAV13-2A0A0B4J235 113 aa11.67□□□□□ -0.54
RAB28-201ENST00000288723 IGLV7-46A0A075B6I9 117 aa11.67□□□□□ -0.54
RAB28-201ENST00000288723 SPINK1P00995 79 aa11.67□□□□□ -0.54
RAB28-201ENST00000288723 SMIM11BQ8TCY0 68 aa11.66□□□□□ -0.54
RAB28-201ENST00000288723 TRBV7-6A0A0J9YX20 115 aa11.65□□□□□ -0.54
RAB28-201ENST00000288723 A4D1N5 150 aa11.65□□□□□ -0.54
RAB28-201ENST00000288723 DEFB105AQ8NG35 78 aa11.65□□□□□ -0.54
RAB28-201ENST00000288723 COX8AP10176 69 aa11.65□□□□□ -0.55
RAB28-201ENST00000288723 A0A1B0GWB2 263 aa11.64□□□□□ -0.55
RAB28-201ENST00000288723 SPRR1BP22528 89 aa11.64□□□□□ -0.55
RAB28-201ENST00000288723 VAMP8Q9BV40 100 aa11.63□□□□□ -0.55
RAB28-201ENST00000288723 TAL2Q16559 108 aa11.63□□□□□ -0.55
RAB28-201ENST00000288723 HIST1H4GQ99525 98 aa11.61□□□□□ -0.55
RAB28-201ENST00000288723 PAM16Q9Y3D7 125 aa11.61□□□□□ -0.55
RAB28-201ENST00000288723 Q1RN00 199 aa11.6□□□□□ -0.55
RAB28-201ENST00000288723 SLC25A34Q6PIV7 304 aa11.59□□□□□ -0.55
RAB28-201ENST00000288723 LAMTOR3Q9UHA4 124 aa11.59□□□□□ -0.55
RAB28-201ENST00000288723 TPRXLQ17RH7 258 aa11.58□□□□□ -0.56
RAB28-201ENST00000288723 SPATA45Q537H7 98 aa11.58□□□□□ -0.56
RAB28-201ENST00000288723 CDIP1Q9H305 208 aa11.58□□□□□ -0.56
RAB28-201ENST00000288723 UQCR10Q9UDW1 63 aa11.58□□□□□ -0.56
RAB28-201ENST00000288723 TEX49A0A1B0GTD5 131 aa11.57□□□□□ -0.56
RAB28-201ENST00000288723 Q8N377 158 aa11.57□□□□□ -0.56
RAB28-201ENST00000288723 MUC2Q02817 5179 aa11.57□□□□□ -0.56
RAB28-201ENST00000288723 LINC01547P58512 204 aaPredicted RBP11.56□□□□□ -0.56
RAB28-201ENST00000288723 RPS29P62273 56 aaKnown RBP11.56□□□□□ -0.56
RAB28-201ENST00000288723 UBE2V1Q13404 147 aa11.56□□□□□ -0.56
RAB28-201ENST00000288723 BATFQ16520 125 aa11.56□□□□□ -0.56
RAB28-201ENST00000288723 FP248Q71RG6 208 aaPredicted RBP11.56□□□□□ -0.56
RAB28-201ENST00000288723 HRCT1Q6UXD1 115 aa11.55□□□□□ -0.56
RAB28-201ENST00000288723 SMIM29Q86T20 159 aa11.53□□□□□ -0.56
RAB28-201ENST00000288723 IGLV5-48A0A075B6I7 105 aa11.53□□□□□ -0.56
RAB28-201ENST00000288723 VAMP3Q15836 100 aa11.53□□□□□ -0.56
RAB28-201ENST00000288723 SLC25A20O43772 301 aa11.51□□□□□ -0.57
RAB28-201ENST00000288723 NHP2Q9NX24 153 aaKnown RBP11.51□□□□□ -0.57
RAB28-201ENST00000288723 LINC00575Q6W349 94 aa11.5□□□□□ -0.57
RAB28-201ENST00000288723 C2orf91Q6ZV80 131 aa11.5□□□□□ -0.57
RAB28-201ENST00000288723 HIGD1BQ9P298 99 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms