RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 SMIM11BQ8TCY0 68 aa13.44□□□□□ -0.26
PDLIM3-203ENST00000284771 SPRR1AP35321 89 aa13.44□□□□□ -0.26
PDLIM3-203ENST00000284771 REG3GQ6UW15 175 aa13.44□□□□□ -0.26
PDLIM3-203ENST00000284771 KRTAP4-16G5E9R7 235 aaPredicted RBP13.43□□□□□ -0.26
PDLIM3-203ENST00000284771 H7C2G1 150 aa13.43□□□□□ -0.26
PDLIM3-203ENST00000284771 PRYO14603 147 aa13.42□□□□□ -0.26
PDLIM3-203ENST00000284771 ZNF73O43830 326 aaPredicted RBP13.41□□□□□ -0.26
PDLIM3-203ENST00000284771 C1orf137Q5JT78 98 aa13.4□□□□□ -0.26
PDLIM3-203ENST00000284771 KRTAP10-4P60372 401 aaPredicted RBP13.39□□□□□ -0.27
PDLIM3-203ENST00000284771 C6orf99Q4VX62 202 aa13.39□□□□□ -0.27
PDLIM3-203ENST00000284771 BCE1O60756 84 aa13.37□□□□□ -0.27
PDLIM3-203ENST00000284771 RPL28P46779 137 aaKnown RBP13.37□□□□□ -0.27
PDLIM3-203ENST00000284771 TSPAN13O95857 204 aa13.36□□□□□ -0.27
PDLIM3-203ENST00000284771 RPL37AP61513 92 aaKnown RBP13.36□□□□□ -0.27
PDLIM3-203ENST00000284771 DIRC1Q969H9 104 aa13.34□□□□□ -0.27
PDLIM3-203ENST00000284771 CBY1Q9Y3M2 126 aa13.34□□□□□ -0.27
PDLIM3-203ENST00000284771 B5MCH6 92 aa13.34□□□□□ -0.27
PDLIM3-203ENST00000284771 PRLHP81277 87 aa13.34□□□□□ -0.27
PDLIM3-203ENST00000284771 Q1RN00 199 aa13.34□□□□□ -0.27
PDLIM3-203ENST00000284771 FAM19A1Q7Z5A9 133 aa13.34□□□□□ -0.27
PDLIM3-203ENST00000284771 KRTAP13-1Q8IUC0 172 aa13.34□□□□□ -0.27
PDLIM3-203ENST00000284771 IGLV7-43P04211 117 aa13.33□□□□□ -0.28
PDLIM3-203ENST00000284771 SRRM2Q9UQ35 2752 aaKnown RBP13.33□□□□□ -0.28
PDLIM3-203ENST00000284771 Q8N1X5 172 aa13.32□□□□□ -0.28
PDLIM3-203ENST00000284771 ETDCA0A1B0GVM5 59 aa13.31□□□□□ -0.28
PDLIM3-203ENST00000284771 Q5VSD8 79 aa13.31□□□□□ -0.28
PDLIM3-203ENST00000284771 FAM229AH3BQW9 127 aa13.31□□□□□ -0.28
PDLIM3-203ENST00000284771 TRIAP1O43715 76 aa13.3□□□□□ -0.28
PDLIM3-203ENST00000284771 ELOF1P60002 83 aaKnown RBP13.3□□□□□ -0.28
PDLIM3-203ENST00000284771 Q6ZRX8 168 aa13.3□□□□□ -0.28
PDLIM3-203ENST00000284771 NAA38Q9BRA0 125 aaKnown RBP13.3□□□□□ -0.28
PDLIM3-203ENST00000284771 TAX1BP3O14907 124 aa13.29□□□□□ -0.28
PDLIM3-203ENST00000284771 Q9BRP9 147 aa13.28□□□□□ -0.28
PDLIM3-203ENST00000284771 TRBV7-6A0A0J9YX20 115 aa13.28□□□□□ -0.28
PDLIM3-203ENST00000284771 H0Y9J4 135 aa13.28□□□□□ -0.28
PDLIM3-203ENST00000284771 ZNF861PO60384 105 aa13.28□□□□□ -0.28
PDLIM3-203ENST00000284771 UBE2AP49459 152 aa13.28□□□□□ -0.28
PDLIM3-203ENST00000284771 COX7BP24311 80 aa13.27□□□□□ -0.29
PDLIM3-203ENST00000284771 SMCR5Q8TEV8 140 aa13.26□□□□□ -0.29
PDLIM3-203ENST00000284771 HERC2O95714 4834 aa13.26□□□□□ -0.29
PDLIM3-203ENST00000284771 PLA2G1BP04054 148 aaKnown RBP13.25□□□□□ -0.29
PDLIM3-203ENST00000284771 PSMB2P49721 201 aa13.24□□□□□ -0.29
PDLIM3-203ENST00000284771 COL5A1-AS1Q5SY13 56 aa13.24□□□□□ -0.29
PDLIM3-203ENST00000284771 VAMP3Q15836 100 aa13.23□□□□□ -0.29
PDLIM3-203ENST00000284771 ERC2-IT1O76042 136 aa13.22□□□□□ -0.29
PDLIM3-203ENST00000284771 FAM218AQ96MZ4 157 aa13.22□□□□□ -0.29
PDLIM3-203ENST00000284771 HIGD2AQ9BW72 106 aa13.22□□□□□ -0.29
PDLIM3-203ENST00000284771 KRTAP4-5Q9BYR2 181 aa13.22□□□□□ -0.29
PDLIM3-203ENST00000284771 H3BUT2 72 aa13.21□□□□□ -0.29
PDLIM3-203ENST00000284771 C9orf118A6NHY6 69 aa13.21□□□□□ -0.3
PDLIM3-203ENST00000284771 LINC00575Q6W349 94 aa13.21□□□□□ -0.3
PDLIM3-203ENST00000284771 CLEC2BQ92478 149 aa13.19□□□□□ -0.3
PDLIM3-203ENST00000284771 H0YGX0 51 aa13.18□□□□□ -0.3
PDLIM3-203ENST00000284771 COX6CP09669 75 aa13.17□□□□□ -0.3
PDLIM3-203ENST00000284771 INAFM2P0DMQ5 153 aa13.17□□□□□ -0.3
PDLIM3-203ENST00000284771 SCGB1C2P0DMR2 95 aa13.16□□□□□ -0.3
PDLIM3-203ENST00000284771 DHRS4-AS1Q9P1J3 65 aa13.16□□□□□ -0.3
PDLIM3-203ENST00000284771 SPINK6Q6UWN8 80 aa13.15□□□□□ -0.3
PDLIM3-203ENST00000284771 hADV29S1A0JD25 119 aa13.13□□□□□ -0.31
PDLIM3-203ENST00000284771 ST20-AS1Q8NBB2 130 aa13.13□□□□□ -0.31
PDLIM3-203ENST00000284771 A0A1W2PPM0 123 aa13.12□□□□□ -0.31
PDLIM3-203ENST00000284771 SLC25A20O43772 301 aa13.1□□□□□ -0.31
PDLIM3-203ENST00000284771 TCL1BO95988 128 aa13.1□□□□□ -0.31
PDLIM3-203ENST00000284771 PKHD1L1Q86WI1 4243 aa13.1□□□□□ -0.31
PDLIM3-203ENST00000284771 LST1O00453 97 aa13.08□□□□□ -0.32
PDLIM3-203ENST00000284771 Q6ZQY7 126 aa13.07□□□□□ -0.32
PDLIM3-203ENST00000284771 ABCA13Q86UQ4 5058 aa13.07□□□□□ -0.32
PDLIM3-203ENST00000284771 KRTAP1-4P0C5Y4 121 aa13.06□□□□□ -0.32
PDLIM3-203ENST00000284771 LINC01547P58512 204 aaPredicted RBP13.06□□□□□ -0.32
PDLIM3-203ENST00000284771 SPRR4Q96PI1 79 aa13.06□□□□□ -0.32
PDLIM3-203ENST00000284771 ANAPC11Q9NYG5 84 aa13.06□□□□□ -0.32
PDLIM3-203ENST00000284771 FLG2Q5D862 2391 aaPredicted RBP13.06□□□□□ -0.32
PDLIM3-203ENST00000284771 A0A1B0GX51 115 aa13.05□□□□□ -0.32
PDLIM3-203ENST00000284771 FABP2P12104 132 aa13.04□□□□□ -0.32
PDLIM3-203ENST00000284771 LRP1Q07954 4544 aaKnown RBP13.04□□□□□ -0.32
PDLIM3-203ENST00000284771 GAGE2AQ6NT46 116 aa13.03□□□□□ -0.32
PDLIM3-203ENST00000284771 LYRM7Q5U5X0 104 aa13.02□□□□□ -0.32
PDLIM3-203ENST00000284771 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.02□□□□□ -0.32
PDLIM3-203ENST00000284771 DEFB105AQ8NG35 78 aa13.02□□□□□ -0.32
PDLIM3-203ENST00000284771 TRACP01848 142 aa13.02□□□□□ -0.33
PDLIM3-203ENST00000284771 IGLV5-48A0A075B6I7 105 aa13.01□□□□□ -0.33
PDLIM3-203ENST00000284771 TRBV20-1A0A075B6N2 111 aa13.01□□□□□ -0.33
PDLIM3-203ENST00000284771 ATXN8Q156A1 80 aa13□□□□□ -0.33
PDLIM3-203ENST00000284771 Q8N377 158 aa13□□□□□ -0.33
PDLIM3-203ENST00000284771 SNCGO76070 127 aa12.99□□□□□ -0.33
PDLIM3-203ENST00000284771 LINC00483Q53H64 154 aa12.99□□□□□ -0.33
PDLIM3-203ENST00000284771 MYCBP2O75592 4640 aa12.99□□□□□ -0.33
PDLIM3-203ENST00000284771 ZNF706Q9Y5V0 76 aaPredicted RBP12.99□□□□□ -0.33
PDLIM3-203ENST00000284771 SPCS1Q9Y6A9 102 aa12.99□□□□□ -0.33
PDLIM3-203ENST00000284771 SPRR1BP22528 89 aa12.97□□□□□ -0.33
PDLIM3-203ENST00000284771 H3BMG7 143 aa12.96□□□□□ -0.33
PDLIM3-203ENST00000284771 DNAL4O96015 105 aa12.96□□□□□ -0.33
PDLIM3-203ENST00000284771 A0A087X002 238 aa12.96□□□□□ -0.34
PDLIM3-203ENST00000284771 TEX49A0A1B0GTD5 131 aa12.96□□□□□ -0.34
PDLIM3-203ENST00000284771 SMIM29Q86T20 159 aa12.95□□□□□ -0.34
PDLIM3-203ENST00000284771 C3orf22Q8N5N4 141 aa12.95□□□□□ -0.34
PDLIM3-203ENST00000284771 FAT3Q8TDW7 4589 aa12.94□□□□□ -0.34
PDLIM3-203ENST00000284771 OCIAD2Q56VL3 154 aa12.93□□□□□ -0.34
PDLIM3-203ENST00000284771 ORMDL1Q9P0S3 153 aa12.93□□□□□ -0.34
PDLIM3-203ENST00000284771 K7EP34 96 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms