RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 KIF25-AS1Q9Y6Z4 181 aa2.71□□□□□ -1.98
CD44-202ENST00000278385 SACSQ9NZJ4 4579 aa2.7□□□□□ -1.98
CD44-202ENST00000278385 A8MU10 97 aa2.7□□□□□ -1.98
CD44-202ENST00000278385 PSCAO43653 123 aa2.7□□□□□ -1.98
CD44-202ENST00000278385 LY6G6CO95867 125 aa2.7□□□□□ -1.98
CD44-202ENST00000278385 IGLC2P0DOY2 106 aa2.7□□□□□ -1.98
CD44-202ENST00000278385 IGLC3P0DOY3 106 aa2.7□□□□□ -1.98
CD44-202ENST00000278385 OR10AG1Q8NH19 301 aa2.7□□□□□ -1.98
CD44-202ENST00000278385 Q8TAT8 98 aa2.7□□□□□ -1.98
CD44-202ENST00000278385 HIGD2AQ9BW72 106 aa2.7□□□□□ -1.98
CD44-202ENST00000278385 PSENENQ9NZ42 101 aa2.7□□□□□ -1.98
CD44-202ENST00000278385 TRBV10-3A0A0K0K1G6 114 aa2.69□□□□□ -1.98
CD44-202ENST00000278385 LCE3CQ5T5A8 94 aa2.69□□□□□ -1.98
CD44-202ENST00000278385 RPL7L1Q6DKI1 246 aaKnown RBP2.69□□□□□ -1.98
CD44-202ENST00000278385 SPINT4Q6UDR6 99 aa2.69□□□□□ -1.98
CD44-202ENST00000278385 CYP2G1PQ6ZSU1 146 aa2.69□□□□□ -1.98
CD44-202ENST00000278385 SCRT1Q9BWW7 348 aa2.69□□□□□ -1.98
CD44-202ENST00000278385 DYNC2H1Q8NCM8 4307 aaKnown RBP2.69□□□□□ -1.98
CD44-202ENST00000278385 DNAH7Q8WXX0 4024 aa2.69□□□□□ -1.98
CD44-202ENST00000278385 RYR3Q15413 4870 aa2.69□□□□□ -1.98
CD44-202ENST00000278385 DNAH1Q9P2D7 4330 aa2.69□□□□□ -1.98
CD44-202ENST00000278385 TMSB15BA0A087X1C1 80 aa2.68□□□□□ -1.98
CD44-202ENST00000278385 TRAV13-2A0A0B4J235 113 aa2.68□□□□□ -1.98
CD44-202ENST00000278385 TRAV12-1A0A0B4J245 112 aa2.68□□□□□ -1.98
CD44-202ENST00000278385 A0A1W2PPM0 123 aa2.68□□□□□ -1.98
CD44-202ENST00000278385 DEFB4AO15263 64 aa2.68□□□□□ -1.98
CD44-202ENST00000278385 NDUFC1O43677 76 aa2.68□□□□□ -1.98
CD44-202ENST00000278385 SPART-AS1P0CW21 52 aa2.68□□□□□ -1.98
CD44-202ENST00000278385 ETDBQ3ZM63 59 aa2.68□□□□□ -1.98
CD44-202ENST00000278385 BVES-AS1Q5T3Y7 98 aa2.68□□□□□ -1.98
CD44-202ENST00000278385 KRTAP26-1Q6PEX3 210 aa2.68□□□□□ -1.98
CD44-202ENST00000278385 C2orf82Q6UX34 121 aa2.68□□□□□ -1.98
CD44-202ENST00000278385 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.68□□□□□ -1.98
CD44-202ENST00000278385 ZNF431Q8TF32 576 aaPredicted RBP2.68□□□□□ -1.98
CD44-202ENST00000278385 CYP4F30PQ9H0H9 118 aa2.68□□□□□ -1.98
CD44-202ENST00000278385 STARD9Q9P2P6 4700 aa2.68□□□□□ -1.98
CD44-202ENST00000278385 PLECQ15149 4684 aaKnown RBP2.67□□□□□ -1.98
CD44-202ENST00000278385 DEFB131BA0A096LNP1 70 aa2.67□□□□□ -1.98
CD44-202ENST00000278385 A8MTW9 85 aa2.67□□□□□ -1.98
CD44-202ENST00000278385 H3BRN7 92 aa2.67□□□□□ -1.98
CD44-202ENST00000278385 SYS1-DBNDD2H3BUS1 97 aa2.67□□□□□ -1.98
CD44-202ENST00000278385 GDF5OSQ5U4N7 250 aa2.67□□□□□ -1.98
CD44-202ENST00000278385 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.67□□□□□ -1.98
CD44-202ENST00000278385 C9orf163Q8N9P6 203 aa2.67□□□□□ -1.98
CD44-202ENST00000278385 CYSTM1Q9H1C7 97 aa2.67□□□□□ -1.98
CD44-202ENST00000278385 PSORS1C2Q9UIG4 136 aa2.67□□□□□ -1.98
CD44-202ENST00000278385 APLNQ9ULZ1 77 aa2.67□□□□□ -1.98
CD44-202ENST00000278385 R4GN34 69 aa2.67□□□□□ -1.98
CD44-202ENST00000278385 HCG22E2RYF7 251 aa2.66□□□□□ -1.98
CD44-202ENST00000278385 PRB4P10163 310 aaPredicted RBP2.66□□□□□ -1.98
CD44-202ENST00000278385 DEFB1P60022 68 aa2.66□□□□□ -1.98
CD44-202ENST00000278385 C10orf113Q5VZT2 155 aa2.66□□□□□ -1.98
CD44-202ENST00000278385 SPTSSBQ8NFR3 76 aa2.66□□□□□ -1.98
CD44-202ENST00000278385 Q9BRP9 147 aa2.66□□□□□ -1.98
CD44-202ENST00000278385 CDC42SE1Q9NRR8 79 aa2.66□□□□□ -1.98
CD44-202ENST00000278385 MUC21A0A140T8X8 626 aa2.65□□□□□ -1.99
CD44-202ENST00000278385 WFDC2Q14508 124 aa2.65□□□□□ -1.99
CD44-202ENST00000278385 SPINK13Q1W4C9 94 aa2.65□□□□□ -1.99
CD44-202ENST00000278385 LYPD5Q6UWN5 251 aa2.65□□□□□ -1.99
CD44-202ENST00000278385 CMTM2Q8TAZ6 248 aa2.65□□□□□ -1.99
CD44-202ENST00000278385 NMES1Q9C002 83 aa2.65□□□□□ -1.99
CD44-202ENST00000278385 PRO0461Q9UI25 63 aa2.65□□□□□ -1.99
CD44-202ENST00000278385 RYR2Q92736 4967 aa2.65□□□□□ -1.99
CD44-202ENST00000278385 LYSTQ99698 3801 aa2.65□□□□□ -1.99
CD44-202ENST00000278385 TENM2Q9NT68 2774 aa2.65□□□□□ -1.99
CD44-202ENST00000278385 TENM3Q9P273 2699 aa2.64□□□□□ -1.99
CD44-202ENST00000278385 A0A1W2PNM2 257 aa2.64□□□□□ -1.99
CD44-202ENST00000278385 ODF3Q96PU9 254 aa2.64□□□□□ -1.99
CD44-202ENST00000278385 NXT2Q9NPJ8 142 aaKnown RBP2.64□□□□□ -1.99
CD44-202ENST00000278385 TMEM14CQ9P0S9 112 aa2.64□□□□□ -1.99
CD44-202ENST00000278385 PRO2289Q9P1D8 64 aa2.64□□□□□ -1.99
CD44-202ENST00000278385 C22orf24Q9Y442 160 aa2.64□□□□□ -1.99
CD44-202ENST00000278385 TIMM8BQ9Y5J9 83 aaPredicted RBP2.64□□□□□ -1.99
CD44-202ENST00000278385 COL7A1Q02388 2944 aa2.63□□□□□ -1.99
CD44-202ENST00000278385 CSMD3Q7Z407 3707 aa2.63□□□□□ -1.99
CD44-202ENST00000278385 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
CD44-202ENST00000278385 H7BZZ5 65 aa2.63□□□□□ -1.99
CD44-202ENST00000278385 SIX6O95475 246 aa2.63□□□□□ -1.99
CD44-202ENST00000278385 DEFB130BP0DP73 79 aa2.63□□□□□ -1.99
CD44-202ENST00000278385 DEFB130AP0DP74 79 aa2.63□□□□□ -1.99
CD44-202ENST00000278385 HTN1P15515 57 aa2.63□□□□□ -1.99
CD44-202ENST00000278385 HTN3P15516 51 aa2.63□□□□□ -1.99
CD44-202ENST00000278385 PDE6HQ13956 83 aa2.63□□□□□ -1.99
CD44-202ENST00000278385 UBE2DNLQ8IWF7 75 aa2.63□□□□□ -1.99
CD44-202ENST00000278385 TMEM263Q8WUH6 116 aaKnown RBP2.63□□□□□ -1.99
CD44-202ENST00000278385 LINC01600Q96MT4 127 aa2.63□□□□□ -1.99
CD44-202ENST00000278385 ALMS1Q8TCU4 4167 aa2.63□□□□□ -1.99
CD44-202ENST00000278385 STAB2Q8WWQ8 2551 aa2.62□□□□□ -1.99
CD44-202ENST00000278385 IGHV3-33P01772 117 aa2.62□□□□□ -1.99
CD44-202ENST00000278385 CCL18P55774 89 aa2.62□□□□□ -1.99
CD44-202ENST00000278385 LYPD1Q8N2G4 141 aa2.62□□□□□ -1.99
CD44-202ENST00000278385 PPP1R1CQ8WVI7 109 aa2.62□□□□□ -1.99
CD44-202ENST00000278385 FAM167A-AS1Q96KT0 104 aa2.62□□□□□ -1.99
CD44-202ENST00000278385 NOP10Q9NPE3 64 aaKnown RBP2.62□□□□□ -1.99
CD44-202ENST00000278385 HIGD1BQ9P298 99 aa2.62□□□□□ -1.99
CD44-202ENST00000278385 BIRC6Q9NR09 4857 aa2.62□□□□□ -1.99
CD44-202ENST00000278385 HYDINQ4G0P3 5121 aa2.61□□□□□ -1.99
CD44-202ENST00000278385 TRAV12-3A0A0B4J271 114 aa2.61□□□□□ -1.99
CD44-202ENST00000278385 KANTRA0A1W2PQU2 76 aa2.61□□□□□ -1.99
CD44-202ENST00000278385 H3BNG1 76 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms