RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 EPG5Q9HCE0 2579 aa5.94□□□□□ -1.46
CTDSPL-201ENST00000273179 TRBV6-4A0A1B0GX49 114 aa5.94□□□□□ -1.46
CTDSPL-201ENST00000273179 PRAC2D3DTV9 90 aa5.93□□□□□ -1.46
CTDSPL-201ENST00000273179 Q6ZR54 194 aa5.93□□□□□ -1.46
CTDSPL-201ENST00000273179 CYSRT1A8MQ03 144 aa5.93□□□□□ -1.46
CTDSPL-201ENST00000273179 LINC00575Q6W349 94 aa5.93□□□□□ -1.46
CTDSPL-201ENST00000273179 CHCHD7Q9BUK0 85 aa5.93□□□□□ -1.46
CTDSPL-201ENST00000273179 TLX1NBP0CAT3 122 aa5.93□□□□□ -1.46
CTDSPL-201ENST00000273179 LRRK2Q5S007 2527 aa5.93□□□□□ -1.46
CTDSPL-201ENST00000273179 DEFB131AP59861 70 aa5.93□□□□□ -1.46
CTDSPL-201ENST00000273179 C20orf166-AS1Q96NR2 134 aa5.93□□□□□ -1.46
CTDSPL-201ENST00000273179 C22orf24Q9Y442 160 aa5.93□□□□□ -1.46
CTDSPL-201ENST00000273179 USP9YO00507 2555 aaPredicted RBP5.92□□□□□ -1.46
CTDSPL-201ENST00000273179 IGLV4-60A0A075B6I1 120 aa5.92□□□□□ -1.46
CTDSPL-201ENST00000273179 ANKRD17O75179 2603 aaKnown RBP5.92□□□□□ -1.46
CTDSPL-201ENST00000273179 NBPF19A0A087WUL8 3843 aa5.92□□□□□ -1.46
CTDSPL-201ENST00000273179 A0A1W2PPR1 153 aa5.92□□□□□ -1.46
CTDSPL-201ENST00000273179 POLR2KP53803 58 aaKnown RBP5.92□□□□□ -1.46
CTDSPL-201ENST00000273179 SPINK13Q1W4C9 94 aa5.92□□□□□ -1.46
CTDSPL-201ENST00000273179 A0A1W2PNM2 257 aa5.91□□□□□ -1.46
CTDSPL-201ENST00000273179 CAMK2N1Q7Z7J9 78 aa5.91□□□□□ -1.46
CTDSPL-201ENST00000273179 CIRBP-AS1Q8TBR5 109 aa5.91□□□□□ -1.46
CTDSPL-201ENST00000273179 SMIM1B2RUZ4 78 aa5.91□□□□□ -1.46
CTDSPL-201ENST00000273179 ZNF462Q96JM2 2506 aa5.91□□□□□ -1.46
CTDSPL-201ENST00000273179 ABCA12Q86UK0 2595 aa5.91□□□□□ -1.46
CTDSPL-201ENST00000273179 IGKV4-1P06312 121 aa5.91□□□□□ -1.46
CTDSPL-201ENST00000273179 CCL18P55774 89 aa5.91□□□□□ -1.46
CTDSPL-201ENST00000273179 NOTCH2Q04721 2471 aa5.9□□□□□ -1.47
CTDSPL-201ENST00000273179 CSNK1G2-AS1Q8NCQ2 148 aa5.89□□□□□ -1.47
CTDSPL-201ENST00000273179 A0A087X002 238 aa5.89□□□□□ -1.47
CTDSPL-201ENST00000273179 IGLV10-54A0A075B6I4 117 aa5.89□□□□□ -1.47
CTDSPL-201ENST00000273179 IGLV5-52A0A0A0MRZ9 124 aa5.89□□□□□ -1.47
CTDSPL-201ENST00000273179 CSPG4Q6UVK1 2322 aa5.88□□□□□ -1.47
CTDSPL-201ENST00000273179 DEFB105AQ8NG35 78 aa5.88□□□□□ -1.47
CTDSPL-201ENST00000273179 DNAH10OSP0CZ25 163 aa5.88□□□□□ -1.47
CTDSPL-201ENST00000273179 MRGPRG-AS1Q2M3A8 158 aa5.88□□□□□ -1.47
CTDSPL-201ENST00000273179 DEFB116Q30KQ4 102 aa5.88□□□□□ -1.47
CTDSPL-201ENST00000273179 ZNF469Q96JG9 3925 aaPredicted RBP5.88□□□□□ -1.47
CTDSPL-201ENST00000273179 TRGV1A0A0A0MS02 117 aa5.88□□□□□ -1.47
CTDSPL-201ENST00000273179 FBN2P35556 2912 aa5.88□□□□□ -1.47
CTDSPL-201ENST00000273179 USP24Q9UPU5 2620 aa5.87□□□□□ -1.47
CTDSPL-201ENST00000273179 ST20-AS1Q8NBB2 130 aa5.87□□□□□ -1.47
CTDSPL-201ENST00000273179 TLN2Q9Y4G6 2542 aa5.87□□□□□ -1.47
CTDSPL-201ENST00000273179 IGLV5-39A0A0G2JS06 123 aa5.86□□□□□ -1.47
CTDSPL-201ENST00000273179 ACYP2P14621 99 aa5.86□□□□□ -1.47
CTDSPL-201ENST00000273179 KLK12Q9UKR0 248 aa5.86□□□□□ -1.47
CTDSPL-201ENST00000273179 PTPN13Q12923 2485 aa5.85□□□□□ -1.47
CTDSPL-201ENST00000273179 MAPK1IP1LQ8NDC0 245 aa5.85□□□□□ -1.47
CTDSPL-201ENST00000273179 KRTAP25-1Q3LHN0 102 aa5.85□□□□□ -1.47
CTDSPL-201ENST00000273179 DEFB114Q30KQ6 69 aa5.84□□□□□ -1.47
CTDSPL-201ENST00000273179 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.83□□□□□ -1.48
CTDSPL-201ENST00000273179 NUPR2A6NF83 97 aa5.83□□□□□ -1.48
CTDSPL-201ENST00000273179 MXRA5Q9NR99 2828 aa5.83□□□□□ -1.48
CTDSPL-201ENST00000273179 SETD2Q9BYW2 2564 aaPredicted RBP5.82□□□□□ -1.48
CTDSPL-201ENST00000273179 CR1P17927 2039 aa5.82□□□□□ -1.48
CTDSPL-201ENST00000273179 C4orf3Q8WVX3 66 aa5.82□□□□□ -1.48
CTDSPL-201ENST00000273179 CCDC168Q8NDH2 2452 aa5.82□□□□□ -1.48
CTDSPL-201ENST00000273179 DOPEY1Q5JWR5 2465 aa5.82□□□□□ -1.48
CTDSPL-201ENST00000273179 IGLV1-40P01703 118 aa5.82□□□□□ -1.48
CTDSPL-201ENST00000273179 LINC00483Q53H64 154 aa5.82□□□□□ -1.48
CTDSPL-201ENST00000273179 SLURP1P55000 103 aa5.82□□□□□ -1.48
CTDSPL-201ENST00000273179 Q6YL49 198 aa5.82□□□□□ -1.48
CTDSPL-201ENST00000273179 Q8NBF4 154 aa5.82□□□□□ -1.48
CTDSPL-201ENST00000273179 SONP18583 2426 aaKnown RBP5.81□□□□□ -1.48
CTDSPL-201ENST00000273179 M0R2N4 97 aa5.8□□□□□ -1.48
CTDSPL-201ENST00000273179 EGFEM1PQ0D2K5 195 aa5.8□□□□□ -1.48
CTDSPL-201ENST00000273179 ABCA2Q9BZC7 2435 aa5.8□□□□□ -1.48
CTDSPL-201ENST00000273179 TEX15Q9BXT5 2789 aa5.8□□□□□ -1.48
CTDSPL-201ENST00000273179 NF1P21359 2839 aa5.8□□□□□ -1.48
CTDSPL-201ENST00000273179 DEFB1P60022 68 aa5.8□□□□□ -1.48
CTDSPL-201ENST00000273179 IGLV1-50A0A075B6I6 118 aa5.79□□□□□ -1.48
CTDSPL-201ENST00000273179 CASC10Q5T4H9 136 aa5.79□□□□□ -1.48
CTDSPL-201ENST00000273179 NAV2Q8IVL1 2488 aa5.79□□□□□ -1.48
CTDSPL-201ENST00000273179 J3QKU1 62 aa5.79□□□□□ -1.48
CTDSPL-201ENST00000273179 DEFB136Q30KP8 78 aa5.79□□□□□ -1.48
CTDSPL-201ENST00000273179 ZNF575Q86XF7 245 aa5.79□□□□□ -1.48
CTDSPL-201ENST00000273179 Q8NDZ9 215 aa5.79□□□□□ -1.48
CTDSPL-201ENST00000273179 C1orf137Q5JT78 98 aa5.79□□□□□ -1.48
CTDSPL-201ENST00000273179 CHD6Q8TD26 2715 aa5.78□□□□□ -1.48
CTDSPL-201ENST00000273179 RTL8CO15255 209 aa5.78□□□□□ -1.48
CTDSPL-201ENST00000273179 KPRPQ5T749 579 aaPredicted RBP5.78□□□□□ -1.48
CTDSPL-201ENST00000273179 WNK1Q9H4A3 2382 aa5.78□□□□□ -1.48
CTDSPL-201ENST00000273179 KLK9Q2XQG4 91 aa5.78□□□□□ -1.48
CTDSPL-201ENST00000273179 IGKV2-28A0A075B6P5 120 aa5.78□□□□□ -1.48
CTDSPL-201ENST00000273179 IGKV2D-28P01615 120 aa5.78□□□□□ -1.48
CTDSPL-201ENST00000273179 M0QY20 66 aa5.78□□□□□ -1.48
CTDSPL-201ENST00000273179 C16orf74Q96GX8 76 aa5.78□□□□□ -1.48
CTDSPL-201ENST00000273179 NIPBLQ6KC79 2804 aaeCLIP5.77□□□□□ -1.49
CTDSPL-201ENST00000273179 PRR9Q5T870 116 aa5.77□□□□□ -1.49
CTDSPL-201ENST00000273179 COX17Q14061 63 aa5.76□□□□□ -1.49
CTDSPL-201ENST00000273179 MYO9AB2RTY4 2548 aa5.76□□□□□ -1.49
CTDSPL-201ENST00000273179 AKAP9Q99996 3911 aa5.76□□□□□ -1.49
CTDSPL-201ENST00000273179 C7orf33Q8WU49 177 aa5.76□□□□□ -1.49
CTDSPL-201ENST00000273179 KCNQ1DNQ9H478 68 aa5.76□□□□□ -1.49
CTDSPL-201ENST00000273179 TENM4Q6N022 2769 aa5.75□□□□□ -1.49
CTDSPL-201ENST00000273179 DEFB130BP0DP73 79 aa5.75□□□□□ -1.49
CTDSPL-201ENST00000273179 DEFB130AP0DP74 79 aa5.75□□□□□ -1.49
CTDSPL-201ENST00000273179 NOP10Q9NPE3 64 aaKnown RBP5.74□□□□□ -1.49
CTDSPL-201ENST00000273179 ACANP16112 2415 aa5.74□□□□□ -1.49
CTDSPL-201ENST00000273179 APCP25054 2843 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms