RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 PLA2G2DQ9UNK4 145 aa8.75□□□□□ -1.01
SMG9-201ENST00000270066 ZNF861PO60384 105 aa8.73□□□□□ -1.01
SMG9-201ENST00000270066 C9orf163Q8N9P6 203 aa8.73□□□□□ -1.01
SMG9-201ENST00000270066 APLNQ9ULZ1 77 aa8.72□□□□□ -1.01
SMG9-201ENST00000270066 DNAH12Q6ZR08 3092 aa8.72□□□□□ -1.01
SMG9-201ENST00000270066 LOC101927531A0A1B0GV80 90 aa8.72□□□□□ -1.01
SMG9-201ENST00000270066 C9orf129Q5T035 196 aaKnown RBP8.71□□□□□ -1.01
SMG9-201ENST00000270066 SSBP3-AS1Q7Z2R9 100 aa8.71□□□□□ -1.01
SMG9-201ENST00000270066 H7BZZ5 65 aa8.71□□□□□ -1.02
SMG9-201ENST00000270066 KLKP1Q107X0 134 aa8.7□□□□□ -1.02
SMG9-201ENST00000270066 MRPL34Q9BQ48 92 aaKnown RBP8.7□□□□□ -1.02
SMG9-201ENST00000270066 EPG5Q9HCE0 2579 aa8.7□□□□□ -1.02
SMG9-201ENST00000270066 K7EQZ3 153 aa8.7□□□□□ -1.02
SMG9-201ENST00000270066 LINC00304Q8N9R0 145 aa8.69□□□□□ -1.02
SMG9-201ENST00000270066 IGLV8-61A0A075B6I0 122 aa8.68□□□□□ -1.02
SMG9-201ENST00000270066 IGFL1Q6UW32 110 aa8.68□□□□□ -1.02
SMG9-201ENST00000270066 ERC2-IT1O76042 136 aa8.67□□□□□ -1.02
SMG9-201ENST00000270066 CNBPP62633 177 aaKnown RBP8.67□□□□□ -1.02
SMG9-201ENST00000270066 ZNF575Q86XF7 245 aa8.66□□□□□ -1.02
SMG9-201ENST00000270066 PRRC2CQ9Y520 2896 aaKnown RBP8.64□□□□□ -1.03
SMG9-201ENST00000270066 COA5Q86WW8 74 aa8.64□□□□□ -1.03
SMG9-201ENST00000270066 CEP350Q5VT06 3117 aa8.64□□□□□ -1.03
SMG9-201ENST00000270066 IGLV7-43P04211 117 aa8.63□□□□□ -1.03
SMG9-201ENST00000270066 PCNTO95613 3336 aa8.62□□□□□ -1.03
SMG9-201ENST00000270066 Q8N377 158 aa8.62□□□□□ -1.03
SMG9-201ENST00000270066 C8orf17Q9NRJ1 99 aa8.61□□□□□ -1.03
SMG9-201ENST00000270066 PRR15Q8IV56 129 aa8.6□□□□□ -1.03
SMG9-201ENST00000270066 DSCR10P59022 87 aa8.6□□□□□ -1.03
SMG9-201ENST00000270066 A0A1B0GVX0 72 aa8.6□□□□□ -1.03
SMG9-201ENST00000270066 A0A1W2PNN7 141 aa8.6□□□□□ -1.03
SMG9-201ENST00000270066 SMR3BP02814 79 aaPredicted RBP8.59□□□□□ -1.03
SMG9-201ENST00000270066 CYP4F30PQ9H0H9 118 aa8.59□□□□□ -1.03
SMG9-201ENST00000270066 CASC10Q5T4H9 136 aa8.59□□□□□ -1.03
SMG9-201ENST00000270066 PSORS1C2Q9UIG4 136 aa8.59□□□□□ -1.03
SMG9-201ENST00000270066 CD164Q04900 197 aa8.58□□□□□ -1.04
SMG9-201ENST00000270066 SPRR4Q96PI1 79 aa8.57□□□□□ -1.04
SMG9-201ENST00000270066 IGLV5-37A0A075B6J1 123 aa8.56□□□□□ -1.04
SMG9-201ENST00000270066 COX6B2Q6YFQ2 88 aa8.55□□□□□ -1.04
SMG9-201ENST00000270066 A0A0G2JQZ4 141 aa8.55□□□□□ -1.04
SMG9-201ENST00000270066 OBSCN-AS1Q96MR7 158 aa8.55□□□□□ -1.04
SMG9-201ENST00000270066 WIPF1O43516 503 aa8.54□□□□□ -1.04
SMG9-201ENST00000270066 HECTD1Q9ULT8 2610 aa8.53□□□□□ -1.04
SMG9-201ENST00000270066 C9orf92A6NGG3 77 aa8.52□□□□□ -1.05
SMG9-201ENST00000270066 KTN1-AS1Q86SY8 53 aa8.52□□□□□ -1.05
SMG9-201ENST00000270066 LINC01600Q96MT4 127 aa8.52□□□□□ -1.05
SMG9-201ENST00000270066 ANAPC11Q9NYG5 84 aa8.51□□□□□ -1.05
SMG9-201ENST00000270066 SPINT4Q6UDR6 99 aa8.5□□□□□ -1.05
SMG9-201ENST00000270066 FLNBO75369 2602 aaKnown RBP8.46□□□□□ -1.05
SMG9-201ENST00000270066 UQCR11O14957 56 aa8.46□□□□□ -1.06
SMG9-201ENST00000270066 TNP2Q05952 138 aa8.46□□□□□ -1.06
SMG9-201ENST00000270066 CYSTM1Q9H1C7 97 aa8.44□□□□□ -1.06
SMG9-201ENST00000270066 A0A1W2PNM2 257 aa8.44□□□□□ -1.06
SMG9-201ENST00000270066 LCA10Q71F78 164 aa8.43□□□□□ -1.06
SMG9-201ENST00000270066 MIR22HGQ0VDD5 57 aa8.43□□□□□ -1.06
SMG9-201ENST00000270066 RBM12B-AS1Q9P1G2 102 aa8.43□□□□□ -1.06
SMG9-201ENST00000270066 Q5XG85 94 aa8.42□□□□□ -1.06
SMG9-201ENST00000270066 IGLV5-48A0A075B6I7 105 aa8.41□□□□□ -1.06
SMG9-201ENST00000270066 A0A0C4DFX4 3053 aa8.39□□□□□ -1.07
SMG9-201ENST00000270066 OCR1Q9BZK8 76 aa8.37□□□□□ -1.07
SMG9-201ENST00000270066 FLNAP21333 2647 aaKnown RBP8.36□□□□□ -1.07
SMG9-201ENST00000270066 CR1P17927 2039 aa8.36□□□□□ -1.07
SMG9-201ENST00000270066 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.36□□□□□ -1.07
SMG9-201ENST00000270066 FAM229BQ4G0N7 80 aa8.35□□□□□ -1.07
SMG9-201ENST00000270066 C5orf42Q9H799 3197 aa8.35□□□□□ -1.07
SMG9-201ENST00000270066 CDC42SE1Q9NRR8 79 aa8.35□□□□□ -1.07
SMG9-201ENST00000270066 Q1T7F1 81 aa8.34□□□□□ -1.07
SMG9-201ENST00000270066 FAM104AQ969W3 186 aa8.34□□□□□ -1.08
SMG9-201ENST00000270066 MGAM2Q2M2H8 2515 aa8.33□□□□□ -1.08
SMG9-201ENST00000270066 FP248Q71RG6 208 aaPredicted RBP8.33□□□□□ -1.08
SMG9-201ENST00000270066 SPANXA2-OT1Q8N9U9 137 aa8.32□□□□□ -1.08
SMG9-201ENST00000270066 BPTFQ12830 3046 aa8.32□□□□□ -1.08
SMG9-201ENST00000270066 PLAC8Q9NZF1 115 aa8.31□□□□□ -1.08
SMG9-201ENST00000270066 HELZ2Q9BYK8 2649 aaKnown RBP8.31□□□□□ -1.08
SMG9-201ENST00000270066 ITPR3Q14573 2671 aa8.31□□□□□ -1.08
SMG9-201ENST00000270066 HTTP42858 3142 aa8.31□□□□□ -1.08
SMG9-201ENST00000270066 CHD7Q9P2D1 2997 aa8.3□□□□□ -1.08
SMG9-201ENST00000270066 MKI67P46013 3256 aaKnown RBP8.29□□□□□ -1.08
SMG9-201ENST00000270066 PRR26Q8N8Z3 221 aa8.28□□□□□ -1.08
SMG9-201ENST00000270066 USP24Q9UPU5 2620 aa8.27□□□□□ -1.08
SMG9-201ENST00000270066 IGLV7-46A0A075B6I9 117 aa8.27□□□□□ -1.09
SMG9-201ENST00000270066 OXTP01178 125 aa8.26□□□□□ -1.09
SMG9-201ENST00000270066 BRCA2P51587 3418 aa8.26□□□□□ -1.09
SMG9-201ENST00000270066 Q6ZSA8 131 aa8.26□□□□□ -1.09
SMG9-201ENST00000270066 Q8N1X5 172 aa8.24□□□□□ -1.09
SMG9-201ENST00000270066 RANBP2P49792 3224 aaKnown RBP8.23□□□□□ -1.09
SMG9-201ENST00000270066 SPRR1AP35321 89 aa8.22□□□□□ -1.09
SMG9-201ENST00000270066 CRIPTQ9P021 101 aa8.21□□□□□ -1.09
SMG9-201ENST00000270066 LAMA3Q16787 3333 aa8.2□□□□□ -1.1
SMG9-201ENST00000270066 CHD9Q3L8U1 2897 aa8.19□□□□□ -1.1
SMG9-201ENST00000270066 ATRQ13535 2644 aa8.19□□□□□ -1.1
SMG9-201ENST00000270066 CFAP54Q96N23 3096 aa8.18□□□□□ -1.1
SMG9-201ENST00000270066 PRAC1Q96KF2 57 aa8.18□□□□□ -1.1
SMG9-201ENST00000270066 Q75L30 129 aa8.17□□□□□ -1.1
SMG9-201ENST00000270066 Q8N9P0 234 aaPredicted RBP8.17□□□□□ -1.1
SMG9-201ENST00000270066 Q8NDZ9 215 aa8.17□□□□□ -1.1
SMG9-201ENST00000270066 CFAP46Q8IYW2 2715 aa8.16□□□□□ -1.1
SMG9-201ENST00000270066 SPRR1BP22528 89 aa8.15□□□□□ -1.11
SMG9-201ENST00000270066 MAST4O15021 2626 aa8.15□□□□□ -1.11
SMG9-201ENST00000270066 LCE6AA0A183 80 aa8.14□□□□□ -1.11
SMG9-201ENST00000270066 LINC01554Q52M75 96 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms