RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 PKD1L2Q7Z442 2459 aa11.05□□□□□ -0.64
TSPAN3-201ENST00000267970 J3QL48 77 aa11.05□□□□□ -0.64
TSPAN3-201ENST00000267970 LINC00528Q8N1L1 170 aa11.04□□□□□ -0.64
TSPAN3-201ENST00000267970 ERC2-IT1O76042 136 aa11.04□□□□□ -0.64
TSPAN3-201ENST00000267970 F8P00451 2351 aa11.04□□□□□ -0.64
TSPAN3-201ENST00000267970 CDC42SE1Q9NRR8 79 aa11.03□□□□□ -0.64
TSPAN3-201ENST00000267970 KRTAP10-11P60412 298 aa11.03□□□□□ -0.64
TSPAN3-201ENST00000267970 COL4A2P08572 1712 aa11.02□□□□□ -0.64
TSPAN3-201ENST00000267970 ZNF575Q86XF7 245 aa11.02□□□□□ -0.65
TSPAN3-201ENST00000267970 KCNQ1DNQ9H478 68 aa11.02□□□□□ -0.65
TSPAN3-201ENST00000267970 KLKP1Q107X0 134 aa11.01□□□□□ -0.65
TSPAN3-201ENST00000267970 A0A1B0GVX0 72 aa11□□□□□ -0.65
TSPAN3-201ENST00000267970 CASC10Q5T4H9 136 aa11□□□□□ -0.65
TSPAN3-201ENST00000267970 IGLV5-48A0A075B6I7 105 aa10.98□□□□□ -0.65
TSPAN3-201ENST00000267970 LUZP6Q538Z0 58 aa10.97□□□□□ -0.65
TSPAN3-201ENST00000267970 CSNK1G2-AS1Q8NCQ2 148 aa10.97□□□□□ -0.65
TSPAN3-201ENST00000267970 H3BS24 57 aa10.96□□□□□ -0.65
TSPAN3-201ENST00000267970 LINC00304Q8N9R0 145 aa10.96□□□□□ -0.65
TSPAN3-201ENST00000267970 PCSK5Q92824 1860 aa10.95□□□□□ -0.66
TSPAN3-201ENST00000267970 IGLV5-37A0A075B6J1 123 aa10.94□□□□□ -0.66
TSPAN3-201ENST00000267970 FAM104AQ969W3 186 aa10.91□□□□□ -0.66
TSPAN3-201ENST00000267970 DNAH12Q6ZR08 3092 aa10.9□□□□□ -0.66
TSPAN3-201ENST00000267970 KRTAP10-3P60369 221 aa10.9□□□□□ -0.66
TSPAN3-201ENST00000267970 UTRNP46939 3433 aa10.9□□□□□ -0.66
TSPAN3-201ENST00000267970 ZNF861PO60384 105 aa10.89□□□□□ -0.67
TSPAN3-201ENST00000267970 PRR26Q8N8Z3 221 aa10.89□□□□□ -0.67
TSPAN3-201ENST00000267970 PRAC1Q96KF2 57 aa10.89□□□□□ -0.67
TSPAN3-201ENST00000267970 ACANP16112 2415 aa10.88□□□□□ -0.67
TSPAN3-201ENST00000267970 RBM12B-AS1Q9P1G2 102 aa10.88□□□□□ -0.67
TSPAN3-201ENST00000267970 K7EIL1 84 aa10.88□□□□□ -0.67
TSPAN3-201ENST00000267970 C9orf163Q8N9P6 203 aa10.87□□□□□ -0.67
TSPAN3-201ENST00000267970 A0A1W2PNM2 257 aa10.87□□□□□ -0.67
TSPAN3-201ENST00000267970 GIG44P09565 113 aaPredicted RBP10.86□□□□□ -0.67
TSPAN3-201ENST00000267970 POLQO75417 2590 aa10.85□□□□□ -0.67
TSPAN3-201ENST00000267970 USP9YO00507 2555 aaPredicted RBP10.85□□□□□ -0.67
TSPAN3-201ENST00000267970 PSORS1C2Q9UIG4 136 aa10.84□□□□□ -0.67
TSPAN3-201ENST00000267970 WWC2-AS2Q96NR7 200 aa10.83□□□□□ -0.68
TSPAN3-201ENST00000267970 ANKRD17O75179 2603 aaKnown RBP10.83□□□□□ -0.68
TSPAN3-201ENST00000267970 ANKRD11Q6UB99 2663 aaPredicted RBP10.83□□□□□ -0.68
TSPAN3-201ENST00000267970 A0A087WTM6 91 aa10.81□□□□□ -0.68
TSPAN3-201ENST00000267970 PRR34Q9NV39 138 aa10.81□□□□□ -0.68
TSPAN3-201ENST00000267970 MTORP42345 2549 aa10.81□□□□□ -0.68
TSPAN3-201ENST00000267970 FAM229BQ4G0N7 80 aa10.79□□□□□ -0.68
TSPAN3-201ENST00000267970 PIEZO1Q92508 2521 aa10.79□□□□□ -0.68
TSPAN3-201ENST00000267970 Q1T7F1 81 aa10.78□□□□□ -0.68
TSPAN3-201ENST00000267970 IGLV7-43P04211 117 aa10.77□□□□□ -0.69
TSPAN3-201ENST00000267970 SPTBN4Q9H254 2564 aa10.76□□□□□ -0.69
TSPAN3-201ENST00000267970 SPRR4Q96PI1 79 aa10.74□□□□□ -0.69
TSPAN3-201ENST00000267970 CR1P17927 2039 aa10.74□□□□□ -0.69
TSPAN3-201ENST00000267970 CEP295Q9C0D2 2601 aa10.73□□□□□ -0.69
TSPAN3-201ENST00000267970 C19orf73Q9NVV2 129 aa10.72□□□□□ -0.69
TSPAN3-201ENST00000267970 BPTFQ12830 3046 aa10.71□□□□□ -0.7
TSPAN3-201ENST00000267970 SPANXA2-OT1Q8N9U9 137 aa10.68□□□□□ -0.7
TSPAN3-201ENST00000267970 CHD8Q9HCK8 2581 aa10.68□□□□□ -0.7
TSPAN3-201ENST00000267970 CAMK2N1Q7Z7J9 78 aa10.68□□□□□ -0.7
TSPAN3-201ENST00000267970 CSAG1Q6PB30 78 aa10.67□□□□□ -0.7
TSPAN3-201ENST00000267970 C5orf42Q9H799 3197 aa10.67□□□□□ -0.7
TSPAN3-201ENST00000267970 TLX1NBP0CAT3 122 aa10.65□□□□□ -0.7
TSPAN3-201ENST00000267970 KLK9Q2XQG4 91 aa10.65□□□□□ -0.71
TSPAN3-201ENST00000267970 A0A1B0GU33 70 aa10.64□□□□□ -0.71
TSPAN3-201ENST00000267970 PCNTO95613 3336 aa10.64□□□□□ -0.71
TSPAN3-201ENST00000267970 CYSTM1Q9H1C7 97 aa10.63□□□□□ -0.71
TSPAN3-201ENST00000267970 PLA2G2DQ9UNK4 145 aa10.63□□□□□ -0.71
TSPAN3-201ENST00000267970 OCR1Q9BZK8 76 aa10.63□□□□□ -0.71
TSPAN3-201ENST00000267970 LINC00612Q8N6U2 182 aa10.62□□□□□ -0.71
TSPAN3-201ENST00000267970 LINC00483Q53H64 154 aa10.6□□□□□ -0.71
TSPAN3-201ENST00000267970 Q5XG85 94 aa10.6□□□□□ -0.71
TSPAN3-201ENST00000267970 CEP350Q5VT06 3117 aa10.59□□□□□ -0.71
TSPAN3-201ENST00000267970 HRES1P13985 223 aa10.59□□□□□ -0.71
TSPAN3-201ENST00000267970 PRRC2CQ9Y520 2896 aaKnown RBP10.58□□□□□ -0.72
TSPAN3-201ENST00000267970 CNBPP62633 177 aaKnown RBP10.56□□□□□ -0.72
TSPAN3-201ENST00000267970 Q75L30 129 aa10.56□□□□□ -0.72
TSPAN3-201ENST00000267970 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.55□□□□□ -0.72
TSPAN3-201ENST00000267970 Q8N9P0 234 aaPredicted RBP10.54□□□□□ -0.72
TSPAN3-201ENST00000267970 TNP2Q05952 138 aa10.54□□□□□ -0.72
TSPAN3-201ENST00000267970 A0A096LNT2 108 aa10.52□□□□□ -0.72
TSPAN3-201ENST00000267970 SPINK7P58062 85 aa10.52□□□□□ -0.73
TSPAN3-201ENST00000267970 USP24Q9UPU5 2620 aa10.51□□□□□ -0.73
TSPAN3-201ENST00000267970 Q6ZSA8 131 aa10.51□□□□□ -0.73
TSPAN3-201ENST00000267970 A0A0A0MQY5 61 aa10.51□□□□□ -0.73
TSPAN3-201ENST00000267970 FP248Q71RG6 208 aaPredicted RBP10.51□□□□□ -0.73
TSPAN3-201ENST00000267970 IGLV7-46A0A075B6I9 117 aa10.5□□□□□ -0.73
TSPAN3-201ENST00000267970 M0R2T5 61 aa10.49□□□□□ -0.73
TSPAN3-201ENST00000267970 Q8NDZ9 215 aa10.47□□□□□ -0.73
TSPAN3-201ENST00000267970 Q5VV11 94 aa10.45□□□□□ -0.74
TSPAN3-201ENST00000267970 FASNP49327 2511 aaKnown RBP10.42□□□□□ -0.74
TSPAN3-201ENST00000267970 LINC01558Q9Y6Z2 57 aa10.39□□□□□ -0.75
TSPAN3-201ENST00000267970 MMP24-AS1A0A0U1RRL7 71 aa10.38□□□□□ -0.75
TSPAN3-201ENST00000267970 CFAP54Q96N23 3096 aa10.37□□□□□ -0.75
TSPAN3-201ENST00000267970 S4R3F8 94 aa10.36□□□□□ -0.75
TSPAN3-201ENST00000267970 KRTAP1-3Q8IUG1 177 aa10.35□□□□□ -0.75
TSPAN3-201ENST00000267970 DMAC1Q96GE9 116 aa10.33□□□□□ -0.76
TSPAN3-201ENST00000267970 Q5W150 140 aa10.3□□□□□ -0.76
TSPAN3-201ENST00000267970 OXTP01178 125 aa10.3□□□□□ -0.76
TSPAN3-201ENST00000267970 ZCCHC13Q8WW36 166 aaKnown RBP10.29□□□□□ -0.76
TSPAN3-201ENST00000267970 KRTAP1-1Q07627 177 aa10.28□□□□□ -0.76
TSPAN3-201ENST00000267970 MGAM2Q2M2H8 2515 aa10.27□□□□□ -0.76
TSPAN3-201ENST00000267970 A0A0C4DFX4 3053 aa10.25□□□□□ -0.77
TSPAN3-201ENST00000267970 R4GN34 69 aa10.23□□□□□ -0.77
TSPAN3-201ENST00000267970 ROMO1P60602 79 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms