RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 H0Y9P7 68 aa10.31□□□□□ -0.76
TIMP3-201ENST00000266085 SERP1Q9Y6X1 66 aa10.31□□□□□ -0.76
TIMP3-201ENST00000266085 Q8NBF4 154 aa10.3□□□□□ -0.76
TIMP3-201ENST00000266085 K7ERS5 55 aa10.3□□□□□ -0.76
TIMP3-201ENST00000266085 PCOTHQ58A44 107 aa10.3□□□□□ -0.76
TIMP3-201ENST00000266085 EPM2AB3EWF7 344 aa10.29□□□□□ -0.76
TIMP3-201ENST00000266085 IGLV6-57P01721 117 aa10.29□□□□□ -0.76
TIMP3-201ENST00000266085 Q6ZQT0 140 aa10.29□□□□□ -0.76
TIMP3-201ENST00000266085 VCANP13611 3396 aa10.28□□□□□ -0.76
TIMP3-201ENST00000266085 A6NED7 52 aa10.28□□□□□ -0.76
TIMP3-201ENST00000266085 EIF4EBP3O60516 100 aaPredicted RBP10.28□□□□□ -0.76
TIMP3-201ENST00000266085 LINC00476Q8WZB0 136 aa10.28□□□□□ -0.76
TIMP3-201ENST00000266085 ATMQ13315 3056 aa10.27□□□□□ -0.76
TIMP3-201ENST00000266085 ST20-AS1Q8NBB2 130 aa10.27□□□□□ -0.77
TIMP3-201ENST00000266085 LOC110117498A0A087WWA1 95 aa10.26□□□□□ -0.77
TIMP3-201ENST00000266085 TM2D3Q9BRN9 247 aa10.26□□□□□ -0.77
TIMP3-201ENST00000266085 SVIPQ8NHG7 77 aa10.26□□□□□ -0.77
TIMP3-201ENST00000266085 RETNLBQ9BQ08 111 aa10.26□□□□□ -0.77
TIMP3-201ENST00000266085 TACC2O95359 2948 aa10.25□□□□□ -0.77
TIMP3-201ENST00000266085 COL6A3P12111 3177 aa10.25□□□□□ -0.77
TIMP3-201ENST00000266085 FAM168BA1KXE4 195 aa10.24□□□□□ -0.77
TIMP3-201ENST00000266085 SMIM29Q86T20 159 aa10.23□□□□□ -0.77
TIMP3-201ENST00000266085 CR1P17927 2039 aa10.23□□□□□ -0.77
TIMP3-201ENST00000266085 SPACA4Q8TDM5 124 aa10.23□□□□□ -0.77
TIMP3-201ENST00000266085 COL12A1Q99715 3063 aa10.23□□□□□ -0.77
TIMP3-201ENST00000266085 BCE1O60756 84 aa10.22□□□□□ -0.77
TIMP3-201ENST00000266085 SERTAD4-AS1Q5TG53 156 aa10.22□□□□□ -0.77
TIMP3-201ENST00000266085 A0A0U1RQV1 116 aa10.21□□□□□ -0.77
TIMP3-201ENST00000266085 hDV103S1A0JD37 113 aa10.21□□□□□ -0.77
TIMP3-201ENST00000266085 CRYGAP11844 174 aa10.21□□□□□ -0.77
TIMP3-201ENST00000266085 C15orf56Q8N910 161 aa10.21□□□□□ -0.78
TIMP3-201ENST00000266085 C1orf64Q8NEQ6 169 aa10.2□□□□□ -0.78
TIMP3-201ENST00000266085 KCNQ1DNQ9H478 68 aa10.2□□□□□ -0.78
TIMP3-201ENST00000266085 BOD1L1Q8NFC6 3051 aa10.2□□□□□ -0.78
TIMP3-201ENST00000266085 ITPR1Q14643 2758 aa10.2□□□□□ -0.78
TIMP3-201ENST00000266085 DMXL2Q8TDJ6 3036 aa10.19□□□□□ -0.78
TIMP3-201ENST00000266085 NBEAL2Q6ZNJ1 2754 aa10.18□□□□□ -0.78
TIMP3-201ENST00000266085 NSD1Q96L73 2696 aaPredicted RBP10.18□□□□□ -0.78
TIMP3-201ENST00000266085 IGLV1-50A0A075B6I6 118 aa10.18□□□□□ -0.78
TIMP3-201ENST00000266085 LINC00528Q8N1L1 170 aa10.18□□□□□ -0.78
TIMP3-201ENST00000266085 ZNF575Q86XF7 245 aa10.18□□□□□ -0.78
TIMP3-201ENST00000266085 TP53AIP1Q9HCN2 124 aa10.16□□□□□ -0.78
TIMP3-201ENST00000266085 TRBV7-4A0A0J9YYF1 115 aa10.15□□□□□ -0.78
TIMP3-201ENST00000266085 IGKV2D-30A0A075B6S6 120 aa10.14□□□□□ -0.79
TIMP3-201ENST00000266085 IGKV2-30P06310 120 aa10.14□□□□□ -0.79
TIMP3-201ENST00000266085 ADGRG4Q8IZF6 3080 aa10.14□□□□□ -0.79
TIMP3-201ENST00000266085 FREM2Q5SZK8 3169 aa10.14□□□□□ -0.79
TIMP3-201ENST00000266085 NBEAQ8NFP9 2946 aa10.13□□□□□ -0.79
TIMP3-201ENST00000266085 FAM229AH3BQW9 127 aa10.13□□□□□ -0.79
TIMP3-201ENST00000266085 SPINK1P00995 79 aa10.13□□□□□ -0.79
TIMP3-201ENST00000266085 ITPR2Q14571 2701 aa10.12□□□□□ -0.79
TIMP3-201ENST00000266085 TYMSOSQ8TAI1 123 aa10.12□□□□□ -0.79
TIMP3-201ENST00000266085 C9orf163Q8N9P6 203 aa10.11□□□□□ -0.79
TIMP3-201ENST00000266085 REV3LO60673 3130 aa10.11□□□□□ -0.79
TIMP3-201ENST00000266085 C9orf129Q5T035 196 aaKnown RBP10.11□□□□□ -0.79
TIMP3-201ENST00000266085 A0A087WTM6 91 aa10.1□□□□□ -0.79
TIMP3-201ENST00000266085 CASC10Q5T4H9 136 aa10.1□□□□□ -0.79
TIMP3-201ENST00000266085 TLX1NBP0CAT3 122 aa10.09□□□□□ -0.79
TIMP3-201ENST00000266085 APLNQ9ULZ1 77 aa10.09□□□□□ -0.79
TIMP3-201ENST00000266085 ZZEF1O43149 2961 aa10.06□□□□□ -0.8
TIMP3-201ENST00000266085 PSPHP1O15172 72 aa10.06□□□□□ -0.8
TIMP3-201ENST00000266085 RPL37AP61513 92 aaKnown RBP10.06□□□□□ -0.8
TIMP3-201ENST00000266085 TRAV22A0A0B4J277 110 aa10.06□□□□□ -0.8
TIMP3-201ENST00000266085 DNAH14Q0VDD8 3507 aa10.06□□□□□ -0.8
TIMP3-201ENST00000266085 KALRNO60229 2985 aa10.06□□□□□ -0.8
TIMP3-201ENST00000266085 WIPF1O43516 503 aa10.05□□□□□ -0.8
TIMP3-201ENST00000266085 LINC00313P59037 77 aa10.04□□□□□ -0.8
TIMP3-201ENST00000266085 PLA2G2DQ9UNK4 145 aa10.04□□□□□ -0.8
TIMP3-201ENST00000266085 H3BPC8 53 aa10.03□□□□□ -0.8
TIMP3-201ENST00000266085 PLA2G1BP04054 148 aaKnown RBP10.03□□□□□ -0.8
TIMP3-201ENST00000266085 Q8N377 158 aa10.03□□□□□ -0.8
TIMP3-201ENST00000266085 A8MWP4 228 aa10.01□□□□□ -0.81
TIMP3-201ENST00000266085 IGFL1Q6UW32 110 aa10.01□□□□□ -0.81
TIMP3-201ENST00000266085 ZNF861PO60384 105 aa10.01□□□□□ -0.81
TIMP3-201ENST00000266085 K7EQZ3 153 aa10□□□□□ -0.81
TIMP3-201ENST00000266085 EYSQ5T1H1 3165 aa10□□□□□ -0.81
TIMP3-201ENST00000266085 TNRC18O15417 2968 aaPredicted RBP9.99□□□□□ -0.81
TIMP3-201ENST00000266085 CNBPP62633 177 aaKnown RBP9.99□□□□□ -0.81
TIMP3-201ENST00000266085 A0A1W2PNN7 141 aa9.98□□□□□ -0.81
TIMP3-201ENST00000266085 C7orf65Q6ZTY9 151 aa9.97□□□□□ -0.81
TIMP3-201ENST00000266085 SSBP3-AS1Q7Z2R9 100 aa9.96□□□□□ -0.81
TIMP3-201ENST00000266085 ACYP2P14621 99 aa9.96□□□□□ -0.82
TIMP3-201ENST00000266085 PMAIP1Q13794 54 aa9.96□□□□□ -0.82
TIMP3-201ENST00000266085 STAB2Q8WWQ8 2551 aa9.94□□□□□ -0.82
TIMP3-201ENST00000266085 C8orf87E5RJ46 101 aa9.94□□□□□ -0.82
TIMP3-201ENST00000266085 SMR3BP02814 79 aaPredicted RBP9.93□□□□□ -0.82
TIMP3-201ENST00000266085 HIVEP1P15822 2718 aa9.93□□□□□ -0.82
TIMP3-201ENST00000266085 C1orf195Q5TG92 126 aa9.93□□□□□ -0.82
TIMP3-201ENST00000266085 MRPL34Q9BQ48 92 aaKnown RBP9.93□□□□□ -0.82
TIMP3-201ENST00000266085 UTP20O75691 2785 aaKnown RBP9.93□□□□□ -0.82
TIMP3-201ENST00000266085 FAM104AQ969W3 186 aa9.92□□□□□ -0.82
TIMP3-201ENST00000266085 LRBAP50851 2863 aa9.92□□□□□ -0.82
TIMP3-201ENST00000266085 A0A0G2JQZ4 141 aa9.92□□□□□ -0.82
TIMP3-201ENST00000266085 Q96NJ1 140 aa9.92□□□□□ -0.82
TIMP3-201ENST00000266085 ERC2-IT1O76042 136 aa9.91□□□□□ -0.82
TIMP3-201ENST00000266085 PSORS1C2Q9UIG4 136 aa9.91□□□□□ -0.82
TIMP3-201ENST00000266085 PRR15Q8IV56 129 aa9.91□□□□□ -0.82
TIMP3-201ENST00000266085 RPS28P62857 69 aaKnown RBP9.9□□□□□ -0.82
TIMP3-201ENST00000266085 ANAPC11Q9NYG5 84 aa9.9□□□□□ -0.82
TIMP3-201ENST00000266085 LOC101927531A0A1B0GV80 90 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms