RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 IGKV2-30P06310 120 aa7.11□□□□□ -1.27
CPT1A-201ENST00000265641 C8orf17Q9NRJ1 99 aa7.11□□□□□ -1.27
CPT1A-201ENST00000265641 Q5VV11 94 aa7.11□□□□□ -1.27
CPT1A-201ENST00000265641 LRRK2Q5S007 2527 aa7.11□□□□□ -1.27
CPT1A-201ENST00000265641 INAFM1C9JVW0 142 aa7.11□□□□□ -1.27
CPT1A-201ENST00000265641 IGLV1-50A0A075B6I6 118 aa7.1□□□□□ -1.27
CPT1A-201ENST00000265641 IGFL1Q6UW32 110 aa7.1□□□□□ -1.27
CPT1A-201ENST00000265641 SSBP3-AS1Q7Z2R9 100 aa7.1□□□□□ -1.27
CPT1A-201ENST00000265641 C16orf90A8MZG2 172 aa7.08□□□□□ -1.28
CPT1A-201ENST00000265641 LINC00313P59037 77 aa7.07□□□□□ -1.28
CPT1A-201ENST00000265641 X6R8D5 127 aa7.07□□□□□ -1.28
CPT1A-201ENST00000265641 A0A1W2PNM2 257 aa7.06□□□□□ -1.28
CPT1A-201ENST00000265641 SPRR4Q96PI1 79 aa7.06□□□□□ -1.28
CPT1A-201ENST00000265641 A0A1B0GVX0 72 aa7.06□□□□□ -1.28
CPT1A-201ENST00000265641 M0R2N4 97 aa7.06□□□□□ -1.28
CPT1A-201ENST00000265641 KRTAP10-9P60411 292 aa7.05□□□□□ -1.28
CPT1A-201ENST00000265641 PRR34Q9NV39 138 aa7.05□□□□□ -1.28
CPT1A-201ENST00000265641 A0A0C4DFX4 3053 aa7.05□□□□□ -1.28
CPT1A-201ENST00000265641 TLX1NBP0CAT3 122 aa7.05□□□□□ -1.28
CPT1A-201ENST00000265641 CRIPTQ9P021 101 aa7.05□□□□□ -1.28
CPT1A-201ENST00000265641 SPTBN4Q9H254 2564 aa7.05□□□□□ -1.28
CPT1A-201ENST00000265641 POLQO75417 2590 aa7.04□□□□□ -1.28
CPT1A-201ENST00000265641 F8P00451 2351 aa7.04□□□□□ -1.28
CPT1A-201ENST00000265641 CHD7Q9P2D1 2997 aa7.03□□□□□ -1.28
CPT1A-201ENST00000265641 BRCA2P51587 3418 aa7.02□□□□□ -1.29
CPT1A-201ENST00000265641 CHD8Q9HCK8 2581 aa7.02□□□□□ -1.29
CPT1A-201ENST00000265641 ANKRD17O75179 2603 aaKnown RBP7.01□□□□□ -1.29
CPT1A-201ENST00000265641 C15orf56Q8N910 161 aa7.01□□□□□ -1.29
CPT1A-201ENST00000265641 FAM104AQ969W3 186 aa7□□□□□ -1.29
CPT1A-201ENST00000265641 DSCR10P59022 87 aa7□□□□□ -1.29
CPT1A-201ENST00000265641 LINC00612Q8N6U2 182 aa7□□□□□ -1.29
CPT1A-201ENST00000265641 IGLV8-61A0A075B6I0 122 aa6.99□□□□□ -1.29
CPT1A-201ENST00000265641 IGLV5-37A0A075B6J1 123 aa6.99□□□□□ -1.29
CPT1A-201ENST00000265641 A0A096LNT2 108 aa6.98□□□□□ -1.29
CPT1A-201ENST00000265641 CHD9Q3L8U1 2897 aa6.98□□□□□ -1.29
CPT1A-201ENST00000265641 CSNK1G2-AS1Q8NCQ2 148 aa6.97□□□□□ -1.29
CPT1A-201ENST00000265641 ACANP16112 2415 aa6.96□□□□□ -1.3
CPT1A-201ENST00000265641 NUPR2A6NF83 97 aa6.96□□□□□ -1.3
CPT1A-201ENST00000265641 DMAC1Q96GE9 116 aa6.95□□□□□ -1.3
CPT1A-201ENST00000265641 Q8NAQ8 132 aa6.95□□□□□ -1.3
CPT1A-201ENST00000265641 C5orf42Q9H799 3197 aa6.95□□□□□ -1.3
CPT1A-201ENST00000265641 DNAH10OSP0CZ25 163 aa6.95□□□□□ -1.3
CPT1A-201ENST00000265641 KRTAP3-3Q9BYR6 98 aa6.94□□□□□ -1.3
CPT1A-201ENST00000265641 KRTAP3-2Q9BYR7 98 aa6.94□□□□□ -1.3
CPT1A-201ENST00000265641 MKI67P46013 3256 aaKnown RBP6.93□□□□□ -1.3
CPT1A-201ENST00000265641 C1orf134Q5TEV5 83 aa6.93□□□□□ -1.3
CPT1A-201ENST00000265641 SMR3AQ99954 134 aa6.93□□□□□ -1.3
CPT1A-201ENST00000265641 C9orf163Q8N9P6 203 aa6.93□□□□□ -1.3
CPT1A-201ENST00000265641 TRANK1O15050 2925 aa6.92□□□□□ -1.3
CPT1A-201ENST00000265641 IGLV5-52A0A0A0MRZ9 124 aa6.92□□□□□ -1.3
CPT1A-201ENST00000265641 GIG44P09565 113 aaPredicted RBP6.92□□□□□ -1.3
CPT1A-201ENST00000265641 PRAC1Q96KF2 57 aa6.91□□□□□ -1.3
CPT1A-201ENST00000265641 A0A087X002 238 aa6.9□□□□□ -1.31
CPT1A-201ENST00000265641 FAM168BA1KXE4 195 aa6.9□□□□□ -1.31
CPT1A-201ENST00000265641 PRR26Q8N8Z3 221 aa6.88□□□□□ -1.31
CPT1A-201ENST00000265641 A6NN06 94 aa6.88□□□□□ -1.31
CPT1A-201ENST00000265641 C19orf73Q9NVV2 129 aa6.86□□□□□ -1.31
CPT1A-201ENST00000265641 CSAG1Q6PB30 78 aa6.86□□□□□ -1.31
CPT1A-201ENST00000265641 ZCCHC13Q8WW36 166 aaKnown RBP6.86□□□□□ -1.31
CPT1A-201ENST00000265641 SPINK7P58062 85 aa6.85□□□□□ -1.31
CPT1A-201ENST00000265641 PLA2G1BP04054 148 aaKnown RBP6.85□□□□□ -1.31
CPT1A-201ENST00000265641 CNBPP62633 177 aaKnown RBP6.85□□□□□ -1.31
CPT1A-201ENST00000265641 HRES1P13985 223 aa6.84□□□□□ -1.31
CPT1A-201ENST00000265641 RANBP2P49792 3224 aaKnown RBP6.84□□□□□ -1.31
CPT1A-201ENST00000265641 A0A0G2JQZ4 141 aa6.83□□□□□ -1.32
CPT1A-201ENST00000265641 A0A1W2PNN7 141 aa6.83□□□□□ -1.32
CPT1A-201ENST00000265641 SPACA4Q8TDM5 124 aa6.83□□□□□ -1.32
CPT1A-201ENST00000265641 LUZP6Q538Z0 58 aa6.82□□□□□ -1.32
CPT1A-201ENST00000265641 MMP24-AS1A0A0U1RRL7 71 aa6.82□□□□□ -1.32
CPT1A-201ENST00000265641 CHTF8P0CG12 524 aa6.81□□□□□ -1.32
CPT1A-201ENST00000265641 Q96NJ1 140 aa6.81□□□□□ -1.32
CPT1A-201ENST00000265641 LAMA3Q16787 3333 aa6.81□□□□□ -1.32
CPT1A-201ENST00000265641 LCE6AA0A183 80 aa6.81□□□□□ -1.32
CPT1A-201ENST00000265641 EPG5Q9HCE0 2579 aa6.8□□□□□ -1.32
CPT1A-201ENST00000265641 CR1P17927 2039 aa6.79□□□□□ -1.32
CPT1A-201ENST00000265641 A0A0A0MQY5 61 aa6.79□□□□□ -1.32
CPT1A-201ENST00000265641 LY6G6CO95867 125 aa6.79□□□□□ -1.32
CPT1A-201ENST00000265641 A0A1B0GU33 70 aa6.78□□□□□ -1.32
CPT1A-201ENST00000265641 SPRR1AP35321 89 aa6.77□□□□□ -1.33
CPT1A-201ENST00000265641 APLNQ9ULZ1 77 aa6.77□□□□□ -1.33
CPT1A-201ENST00000265641 ZNF861PO60384 105 aa6.75□□□□□ -1.33
CPT1A-201ENST00000265641 LAMA2P24043 3122 aaKnown RBP6.75□□□□□ -1.33
CPT1A-201ENST00000265641 CFAP54Q96N23 3096 aa6.75□□□□□ -1.33
CPT1A-201ENST00000265641 USP24Q9UPU5 2620 aa6.74□□□□□ -1.33
CPT1A-201ENST00000265641 CDH23Q9H251 3354 aa6.74□□□□□ -1.33
CPT1A-201ENST00000265641 SPATA8Q6RVD6 105 aa6.73□□□□□ -1.33
CPT1A-201ENST00000265641 SPRR1BP22528 89 aa6.73□□□□□ -1.33
CPT1A-201ENST00000265641 LINC00472Q9H8W2 130 aa6.73□□□□□ -1.33
CPT1A-201ENST00000265641 Q8NDZ9 215 aa6.72□□□□□ -1.33
CPT1A-201ENST00000265641 TYMSOSQ8TAI1 123 aa6.71□□□□□ -1.33
CPT1A-201ENST00000265641 Q6ZR54 194 aa6.71□□□□□ -1.34
CPT1A-201ENST00000265641 RTL8CO15255 209 aa6.7□□□□□ -1.34
CPT1A-201ENST00000265641 NBDYA0A0U1RRE5 68 aa6.7□□□□□ -1.34
CPT1A-201ENST00000265641 KRTAP16-1A8MUX0 517 aa6.68□□□□□ -1.34
CPT1A-201ENST00000265641 UNC80Q8N2C7 3258 aa6.68□□□□□ -1.34
CPT1A-201ENST00000265641 KRTAP29-1A8MX34 341 aaPredicted RBP6.68□□□□□ -1.34
CPT1A-201ENST00000265641 IGLV7-43P04211 117 aa6.68□□□□□ -1.34
CPT1A-201ENST00000265641 FASNP49327 2511 aaKnown RBP6.68□□□□□ -1.34
CPT1A-201ENST00000265641 ROMO1P60602 79 aa6.64□□□□□ -1.35
CPT1A-201ENST00000265641 CASC10Q5T4H9 136 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms