RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 LINC00588Q9Y4M8 146 aa13.27□□□□□ -0.29
CSPG5-201ENST00000264723 DEFB116Q30KQ4 102 aa13.26□□□□□ -0.29
CSPG5-201ENST00000264723 LINC00612Q8N6U2 182 aa13.26□□□□□ -0.29
CSPG5-201ENST00000264723 CRYGAP11844 174 aa13.25□□□□□ -0.29
CSPG5-201ENST00000264723 C22orf24Q9Y442 160 aa13.25□□□□□ -0.29
CSPG5-201ENST00000264723 FAM30AQ9NZY2 134 aa13.24□□□□□ -0.29
CSPG5-201ENST00000264723 PKIGQ9Y2B9 76 aa13.24□□□□□ -0.29
CSPG5-201ENST00000264723 LINC01600Q96MT4 127 aa13.24□□□□□ -0.29
CSPG5-201ENST00000264723 PRLHP81277 87 aa13.24□□□□□ -0.29
CSPG5-201ENST00000264723 C7orf33Q8WU49 177 aa13.24□□□□□ -0.29
CSPG5-201ENST00000264723 TRAV7A0A075B6U4 112 aa13.23□□□□□ -0.29
CSPG5-201ENST00000264723 MRPL55Q7Z7F7 128 aaKnown RBP13.22□□□□□ -0.29
CSPG5-201ENST00000264723 Q6ZRP5 223 aa13.22□□□□□ -0.29
CSPG5-201ENST00000264723 KMT2BQ9UMN6 2715 aaPredicted RBP13.21□□□□□ -0.29
CSPG5-201ENST00000264723 IGLV6-57P01721 117 aa13.2□□□□□ -0.3
CSPG5-201ENST00000264723 WFDC13Q8IUB5 93 aa13.2□□□□□ -0.3
CSPG5-201ENST00000264723 H3BNG1 76 aa13.19□□□□□ -0.3
CSPG5-201ENST00000264723 C1orf137Q5JT78 98 aa13.19□□□□□ -0.3
CSPG5-201ENST00000264723 NDUFB1O75438 58 aa13.19□□□□□ -0.3
CSPG5-201ENST00000264723 K7EIL1 84 aa13.19□□□□□ -0.3
CSPG5-201ENST00000264723 IGLV9-49A0A0B4J1Y8 123 aa13.18□□□□□ -0.3
CSPG5-201ENST00000264723 SVIPQ8NHG7 77 aa13.18□□□□□ -0.3
CSPG5-201ENST00000264723 REG3GQ6UW15 175 aa13.18□□□□□ -0.3
CSPG5-201ENST00000264723 VPREB1P12018 145 aa13.17□□□□□ -0.3
CSPG5-201ENST00000264723 LINC00167Q96N53 147 aa13.17□□□□□ -0.3
CSPG5-201ENST00000264723 VWFP04275 2813 aa13.17□□□□□ -0.3
CSPG5-201ENST00000264723 FAM168BA1KXE4 195 aa13.16□□□□□ -0.3
CSPG5-201ENST00000264723 NUPR2A6NF83 97 aa13.16□□□□□ -0.3
CSPG5-201ENST00000264723 TM2D3Q9BRN9 247 aa13.16□□□□□ -0.3
CSPG5-201ENST00000264723 ELOF1P60002 83 aaKnown RBP13.15□□□□□ -0.3
CSPG5-201ENST00000264723 PRR34Q9NV39 138 aa13.15□□□□□ -0.3
CSPG5-201ENST00000264723 ST20-AS1Q8NBB2 130 aa13.14□□□□□ -0.31
CSPG5-201ENST00000264723 CYSTM1Q9H1C7 97 aa13.13□□□□□ -0.31
CSPG5-201ENST00000264723 MDFIQ99750 246 aa13.13□□□□□ -0.31
CSPG5-201ENST00000264723 SERTAD4-AS1Q5TG53 156 aa13.12□□□□□ -0.31
CSPG5-201ENST00000264723 SPINK6Q6UWN8 80 aa13.12□□□□□ -0.31
CSPG5-201ENST00000264723 C4orf26Q17RF5 130 aa13.11□□□□□ -0.31
CSPG5-201ENST00000264723 CHTF8P0CG12 524 aa13.1□□□□□ -0.31
CSPG5-201ENST00000264723 BRK1Q8WUW1 75 aa13.1□□□□□ -0.31
CSPG5-201ENST00000264723 A0A0G2JQZ4 141 aa13.09□□□□□ -0.31
CSPG5-201ENST00000264723 A0A1W2PNN7 141 aa13.09□□□□□ -0.31
CSPG5-201ENST00000264723 MP68P56378 58 aa13.09□□□□□ -0.31
CSPG5-201ENST00000264723 C15orf56Q8N910 161 aa13.08□□□□□ -0.31
CSPG5-201ENST00000264723 LOC110117498A0A087WWA1 95 aa13.08□□□□□ -0.32
CSPG5-201ENST00000264723 C5orf47Q569G3 176 aa13.08□□□□□ -0.32
CSPG5-201ENST00000264723 TMEM254Q8TBM7 123 aa13.08□□□□□ -0.32
CSPG5-201ENST00000264723 OBSCN-AS1Q96MR7 158 aa13.08□□□□□ -0.32
CSPG5-201ENST00000264723 STAB2Q8WWQ8 2551 aa13.08□□□□□ -0.32
CSPG5-201ENST00000264723 TENM1Q9UKZ4 2725 aa13.07□□□□□ -0.32
CSPG5-201ENST00000264723 DNAH10OSP0CZ25 163 aa13.06□□□□□ -0.32
CSPG5-201ENST00000264723 CASC10Q5T4H9 136 aa13.06□□□□□ -0.32
CSPG5-201ENST00000264723 NBPF19A0A087WUL8 3843 aa13.06□□□□□ -0.32
CSPG5-201ENST00000264723 A0A087WSZ3 146 aa13.06□□□□□ -0.32
CSPG5-201ENST00000264723 CXCL6P80162 114 aa13.05□□□□□ -0.32
CSPG5-201ENST00000264723 GVQW2A0A096LPI5 108 aaPredicted RBP13.04□□□□□ -0.32
CSPG5-201ENST00000264723 A0A0U1RQV1 116 aa13.04□□□□□ -0.32
CSPG5-201ENST00000264723 PRYO14603 147 aa13.04□□□□□ -0.32
CSPG5-201ENST00000264723 Q9BRP9 147 aa13.03□□□□□ -0.32
CSPG5-201ENST00000264723 LINC00528Q8N1L1 170 aa13.02□□□□□ -0.33
CSPG5-201ENST00000264723 SMIM29Q86T20 159 aa13.01□□□□□ -0.33
CSPG5-201ENST00000264723 LINC00474Q9P2X8 69 aa13.01□□□□□ -0.33
CSPG5-201ENST00000264723 F8WDY8 70 aa13.01□□□□□ -0.33
CSPG5-201ENST00000264723 TENM4Q6N022 2769 aa13.01□□□□□ -0.33
CSPG5-201ENST00000264723 PHF5AQ7RTV0 110 aaKnown RBP13.01□□□□□ -0.33
CSPG5-201ENST00000264723 IGLV5-52A0A0A0MRZ9 124 aa12.99□□□□□ -0.33
CSPG5-201ENST00000264723 PDZD2O15018 2839 aa12.98□□□□□ -0.33
CSPG5-201ENST00000264723 C4orf48Q5BLP8 95 aa12.98□□□□□ -0.33
CSPG5-201ENST00000264723 SERP1Q9Y6X1 66 aa12.97□□□□□ -0.33
CSPG5-201ENST00000264723 NDUFC1O43677 76 aa12.95□□□□□ -0.34
CSPG5-201ENST00000264723 Q6ZRX8 168 aa12.95□□□□□ -0.34
CSPG5-201ENST00000264723 Q8N377 158 aa12.94□□□□□ -0.34
CSPG5-201ENST00000264723 TRBV7-4A0A0J9YYF1 115 aa12.94□□□□□ -0.34
CSPG5-201ENST00000264723 IGKV4-1P06312 121 aa12.94□□□□□ -0.34
CSPG5-201ENST00000264723 C1orf134Q5TEV5 83 aa12.94□□□□□ -0.34
CSPG5-201ENST00000264723 TRBV7-6A0A0J9YX20 115 aa12.93□□□□□ -0.34
CSPG5-201ENST00000264723 NBDYA0A0U1RRE5 68 aa12.93□□□□□ -0.34
CSPG5-201ENST00000264723 SMIM26A0A096LP01 95 aa12.92□□□□□ -0.34
CSPG5-201ENST00000264723 OTOGQ6ZRI0 2925 aa12.91□□□□□ -0.34
CSPG5-201ENST00000264723 LINC00208Q96KT6 92 aa12.91□□□□□ -0.34
CSPG5-201ENST00000264723 FBN1P35555 2871 aaKnown RBP12.91□□□□□ -0.34
CSPG5-201ENST00000264723 RPS28P62857 69 aaKnown RBP12.9□□□□□ -0.34
CSPG5-201ENST00000264723 ERC2-IT1O76042 136 aa12.89□□□□□ -0.35
CSPG5-201ENST00000264723 CIRBP-AS1Q8TBR5 109 aa12.89□□□□□ -0.35
CSPG5-201ENST00000264723 RPL37AP61513 92 aaKnown RBP12.87□□□□□ -0.35
CSPG5-201ENST00000264723 LINC00476Q8WZB0 136 aa12.87□□□□□ -0.35
CSPG5-201ENST00000264723 KCNQ1DNQ9H478 68 aa12.87□□□□□ -0.35
CSPG5-201ENST00000264723 H7BZZ5 65 aa12.86□□□□□ -0.35
CSPG5-201ENST00000264723 TENM3Q9P273 2699 aa12.86□□□□□ -0.35
CSPG5-201ENST00000264723 C16orf90A8MZG2 172 aa12.85□□□□□ -0.35
CSPG5-201ENST00000264723 Q8NBF4 154 aa12.85□□□□□ -0.35
CSPG5-201ENST00000264723 EPM2AB3EWF7 344 aa12.83□□□□□ -0.36
CSPG5-201ENST00000264723 IGLV1-50A0A075B6I6 118 aa12.83□□□□□ -0.36
CSPG5-201ENST00000264723 K7EQZ3 153 aa12.83□□□□□ -0.36
CSPG5-201ENST00000264723 ZNF706Q9Y5V0 76 aaPredicted RBP12.82□□□□□ -0.36
CSPG5-201ENST00000264723 WIPF1O43516 503 aa12.81□□□□□ -0.36
CSPG5-201ENST00000264723 PKD1L1Q8TDX9 2849 aa12.81□□□□□ -0.36
CSPG5-201ENST00000264723 PSPHP1O15172 72 aa12.79□□□□□ -0.36
CSPG5-201ENST00000264723 A0A1W2PNM2 257 aa12.79□□□□□ -0.36
CSPG5-201ENST00000264723 HCG22E2RYF7 251 aa12.79□□□□□ -0.36
CSPG5-201ENST00000264723 IGHV6-1A0A0B4J1U7 121 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms