RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 C7orf33Q8WU49 177 aa8.09□□□□□ -1.12
CHMP2B-201ENST00000263780 ZCCHC13Q8WW36 166 aaKnown RBP8.09□□□□□ -1.12
CHMP2B-201ENST00000263780 ZFYVE26Q68DK2 2539 aa8.08□□□□□ -1.12
CHMP2B-201ENST00000263780 IGSF10Q6WRI0 2623 aa8.08□□□□□ -1.12
CHMP2B-201ENST00000263780 Q6ZRX8 168 aa8.08□□□□□ -1.12
CHMP2B-201ENST00000263780 WFDC10BQ8IUB3 73 aa8.08□□□□□ -1.12
CHMP2B-201ENST00000263780 SPRR4Q96PI1 79 aa8.08□□□□□ -1.12
CHMP2B-201ENST00000263780 PLA2G2DQ9UNK4 145 aa8.08□□□□□ -1.12
CHMP2B-201ENST00000263780 ABCA12Q86UK0 2595 aa8.08□□□□□ -1.12
CHMP2B-201ENST00000263780 PRR15Q8IV56 129 aa8.08□□□□□ -1.12
CHMP2B-201ENST00000263780 C1orf64Q8NEQ6 169 aa8.08□□□□□ -1.12
CHMP2B-201ENST00000263780 NDUFB1O75438 58 aa8.07□□□□□ -1.12
CHMP2B-201ENST00000263780 TNP2Q05952 138 aa8.07□□□□□ -1.12
CHMP2B-201ENST00000263780 NIPBLQ6KC79 2804 aaeCLIP8.07□□□□□ -1.12
CHMP2B-201ENST00000263780 SETD2Q9BYW2 2564 aaPredicted RBP8.07□□□□□ -1.12
CHMP2B-201ENST00000263780 CYP4F30PQ9H0H9 118 aa8.07□□□□□ -1.12
CHMP2B-201ENST00000263780 NF1P21359 2839 aa8.07□□□□□ -1.12
CHMP2B-201ENST00000263780 CENPEQ02224 2701 aa8.05□□□□□ -1.12
CHMP2B-201ENST00000263780 ITPR3Q14573 2671 aa8.05□□□□□ -1.12
CHMP2B-201ENST00000263780 TLX1NBP0CAT3 122 aa8.04□□□□□ -1.12
CHMP2B-201ENST00000263780 DSCR10P59022 87 aa8.04□□□□□ -1.12
CHMP2B-201ENST00000263780 SERTAD4-AS1Q5TG53 156 aa8.04□□□□□ -1.12
CHMP2B-201ENST00000263780 GCN1Q92616 2671 aaKnown RBP8.03□□□□□ -1.12
CHMP2B-201ENST00000263780 IGLV5-37A0A075B6J1 123 aa8.03□□□□□ -1.12
CHMP2B-201ENST00000263780 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.03□□□□□ -1.12
CHMP2B-201ENST00000263780 IGKV2D-24A0A075B6R9 120 aa8.03□□□□□ -1.12
CHMP2B-201ENST00000263780 HCG22E2RYF7 251 aa8.03□□□□□ -1.12
CHMP2B-201ENST00000263780 SPRR1AP35321 89 aa8.03□□□□□ -1.12
CHMP2B-201ENST00000263780 NBEAL2Q6ZNJ1 2754 aa8.02□□□□□ -1.13
CHMP2B-201ENST00000263780 IGLV1-50A0A075B6I6 118 aa8.02□□□□□ -1.13
CHMP2B-201ENST00000263780 KRTAP4-16G5E9R7 235 aaPredicted RBP8.02□□□□□ -1.13
CHMP2B-201ENST00000263780 LINC01556Q5JQF7 62 aa8.02□□□□□ -1.13
CHMP2B-201ENST00000263780 Q9BRP9 147 aa8.02□□□□□ -1.13
CHMP2B-201ENST00000263780 APCP25054 2843 aa8.01□□□□□ -1.13
CHMP2B-201ENST00000263780 K7EQZ3 153 aa8.01□□□□□ -1.13
CHMP2B-201ENST00000263780 SEC61GP60059 68 aa8.01□□□□□ -1.13
CHMP2B-201ENST00000263780 ZNF462Q96JM2 2506 aa8.01□□□□□ -1.13
CHMP2B-201ENST00000263780 MP68P56378 58 aa8.01□□□□□ -1.13
CHMP2B-201ENST00000263780 CUBNO60494 3623 aa8.01□□□□□ -1.13
CHMP2B-201ENST00000263780 CCDC168Q8NDH2 2452 aa8□□□□□ -1.13
CHMP2B-201ENST00000263780 LRCOL1A6NCL2 159 aa7.99□□□□□ -1.13
CHMP2B-201ENST00000263780 RPL37AP8A6NKH3 93 aa7.98□□□□□ -1.13
CHMP2B-201ENST00000263780 ST20-AS1Q8NBB2 130 aa7.98□□□□□ -1.13
CHMP2B-201ENST00000263780 UBR5O95071 2799 aaPredicted RBP7.98□□□□□ -1.13
CHMP2B-201ENST00000263780 TRAV22A0A0B4J277 110 aa7.98□□□□□ -1.13
CHMP2B-201ENST00000263780 FLNAP21333 2647 aaKnown RBP7.97□□□□□ -1.13
CHMP2B-201ENST00000263780 PMAIP1Q13794 54 aa7.97□□□□□ -1.13
CHMP2B-201ENST00000263780 HIVEP2P31629 2446 aa7.97□□□□□ -1.13
CHMP2B-201ENST00000263780 PSCAO43653 123 aa7.97□□□□□ -1.13
CHMP2B-201ENST00000263780 UBE2BP63146 152 aa7.96□□□□□ -1.13
CHMP2B-201ENST00000263780 H3BPC8 53 aa7.96□□□□□ -1.14
CHMP2B-201ENST00000263780 PSPHP1O15172 72 aa7.95□□□□□ -1.14
CHMP2B-201ENST00000263780 ZNF469Q96JG9 3925 aaPredicted RBP7.94□□□□□ -1.14
CHMP2B-201ENST00000263780 LINC00476Q8WZB0 136 aa7.94□□□□□ -1.14
CHMP2B-201ENST00000263780 MRPL55Q7Z7F7 128 aaKnown RBP7.94□□□□□ -1.14
CHMP2B-201ENST00000263780 SPANXA2-OT1Q8N9U9 137 aa7.94□□□□□ -1.14
CHMP2B-201ENST00000263780 B9D2Q9BPU9 175 aa7.94□□□□□ -1.14
CHMP2B-201ENST00000263780 ANK3Q12955 4377 aaKnown RBP7.94□□□□□ -1.14
CHMP2B-201ENST00000263780 USP24Q9UPU5 2620 aa7.92□□□□□ -1.14
CHMP2B-201ENST00000263780 DNAH10OSP0CZ25 163 aa7.92□□□□□ -1.14
CHMP2B-201ENST00000263780 PRR4Q16378 134 aa7.91□□□□□ -1.14
CHMP2B-201ENST00000263780 REG3GQ6UW15 175 aa7.91□□□□□ -1.14
CHMP2B-201ENST00000263780 MTORP42345 2549 aa7.91□□□□□ -1.14
CHMP2B-201ENST00000263780 FAM168BA1KXE4 195 aa7.91□□□□□ -1.14
CHMP2B-201ENST00000263780 LIMD2Q9BT23 127 aa7.9□□□□□ -1.14
CHMP2B-201ENST00000263780 LINC00208Q96KT6 92 aa7.9□□□□□ -1.15
CHMP2B-201ENST00000263780 IGLV8-61A0A075B6I0 122 aa7.89□□□□□ -1.15
CHMP2B-201ENST00000263780 IGFL1Q6UW32 110 aa7.89□□□□□ -1.15
CHMP2B-201ENST00000263780 WFDC13Q8IUB5 93 aa7.89□□□□□ -1.15
CHMP2B-201ENST00000263780 A8MUN3 132 aa7.88□□□□□ -1.15
CHMP2B-201ENST00000263780 DEFB131BA0A096LNP1 70 aa7.88□□□□□ -1.15
CHMP2B-201ENST00000263780 ACANP16112 2415 aa7.87□□□□□ -1.15
CHMP2B-201ENST00000263780 UBE2AP49459 152 aa7.87□□□□□ -1.15
CHMP2B-201ENST00000263780 H0Y9P7 68 aa7.86□□□□□ -1.15
CHMP2B-201ENST00000263780 KRTAP7-1Q8IUC3 87 aa7.86□□□□□ -1.15
CHMP2B-201ENST00000263780 A0A087WSZ3 146 aa7.86□□□□□ -1.15
CHMP2B-201ENST00000263780 KRTAP29-1A8MX34 341 aaPredicted RBP7.86□□□□□ -1.15
CHMP2B-201ENST00000263780 RETNQ9HD89 108 aa7.85□□□□□ -1.15
CHMP2B-201ENST00000263780 LINC00588Q9Y4M8 146 aa7.85□□□□□ -1.15
CHMP2B-201ENST00000263780 Q5VV11 94 aa7.85□□□□□ -1.15
CHMP2B-201ENST00000263780 CASC2Q6XLA1 102 aa7.85□□□□□ -1.15
CHMP2B-201ENST00000263780 SMR3AQ99954 134 aa7.85□□□□□ -1.15
CHMP2B-201ENST00000263780 DEFB116Q30KQ4 102 aa7.84□□□□□ -1.15
CHMP2B-201ENST00000263780 C11orf45Q8TAV5 145 aa7.83□□□□□ -1.16
CHMP2B-201ENST00000263780 Q8N9P0 234 aaPredicted RBP7.82□□□□□ -1.16
CHMP2B-201ENST00000263780 CHKB-CPT1BH3BT56 60 aa7.82□□□□□ -1.16
CHMP2B-201ENST00000263780 A8MWP4 228 aa7.8□□□□□ -1.16
CHMP2B-201ENST00000263780 PRB2P02812 416 aaPredicted RBP7.8□□□□□ -1.16
CHMP2B-201ENST00000263780 RPL37AP61513 92 aaKnown RBP7.79□□□□□ -1.16
CHMP2B-201ENST00000263780 CD164Q04900 197 aa7.79□□□□□ -1.16
CHMP2B-201ENST00000263780 A0A0G2JQZ4 141 aa7.78□□□□□ -1.16
CHMP2B-201ENST00000263780 A0A1W2PNN7 141 aa7.78□□□□□ -1.16
CHMP2B-201ENST00000263780 C9orf163Q8N9P6 203 aa7.78□□□□□ -1.16
CHMP2B-201ENST00000263780 PRR15LQ9BU68 103 aa7.78□□□□□ -1.16
CHMP2B-201ENST00000263780 CNBPP62633 177 aaKnown RBP7.78□□□□□ -1.16
CHMP2B-201ENST00000263780 CASC10Q5T4H9 136 aa7.78□□□□□ -1.16
CHMP2B-201ENST00000263780 PDZD2O15018 2839 aa7.77□□□□□ -1.17
CHMP2B-201ENST00000263780 VWFP04275 2813 aa7.77□□□□□ -1.17
CHMP2B-201ENST00000263780 Q75L30 129 aa7.76□□□□□ -1.17
CHMP2B-201ENST00000263780 PRLHP81277 87 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms