RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 C15orf56Q8N910 161 aa8.23□□□□□ -1.09
ARFGEF1-201ENST00000262215 KTN1-AS1Q86SY8 53 aa8.23□□□□□ -1.09
ARFGEF1-201ENST00000262215 LCA10Q71F78 164 aa8.22□□□□□ -1.09
ARFGEF1-201ENST00000262215 LTBP2Q14767 1821 aa8.22□□□□□ -1.09
ARFGEF1-201ENST00000262215 H7BZZ5 65 aa8.22□□□□□ -1.09
ARFGEF1-201ENST00000262215 RBM12B-AS1Q9P1G2 102 aa8.22□□□□□ -1.09
ARFGEF1-201ENST00000262215 WWC2-AS2Q96NR7 200 aa8.21□□□□□ -1.09
ARFGEF1-201ENST00000262215 Q8N377 158 aa8.19□□□□□ -1.1
ARFGEF1-201ENST00000262215 FAM104AQ969W3 186 aa8.19□□□□□ -1.1
ARFGEF1-201ENST00000262215 KLKP1Q107X0 134 aa8.18□□□□□ -1.1
ARFGEF1-201ENST00000262215 ZNF861PO60384 105 aa8.17□□□□□ -1.1
ARFGEF1-201ENST00000262215 KCNQ1DNQ9H478 68 aa8.17□□□□□ -1.1
ARFGEF1-201ENST00000262215 MUC22E2RYF6 1773 aaPredicted RBP8.17□□□□□ -1.1
ARFGEF1-201ENST00000262215 LINC00528Q8N1L1 170 aa8.17□□□□□ -1.1
ARFGEF1-201ENST00000262215 ERC2-IT1O76042 136 aa8.16□□□□□ -1.1
ARFGEF1-201ENST00000262215 CAMK2N1Q7Z7J9 78 aa8.16□□□□□ -1.1
ARFGEF1-201ENST00000262215 PIEZO1Q92508 2521 aa8.16□□□□□ -1.1
ARFGEF1-201ENST00000262215 C10orf142B7Z368 130 aa8.14□□□□□ -1.11
ARFGEF1-201ENST00000262215 M0R2T5 61 aa8.12□□□□□ -1.11
ARFGEF1-201ENST00000262215 PRR26Q8N8Z3 221 aa8.12□□□□□ -1.11
ARFGEF1-201ENST00000262215 COL27A1Q8IZC6 1860 aaPredicted RBP8.12□□□□□ -1.11
ARFGEF1-201ENST00000262215 KRTAP10-11P60412 298 aa8.11□□□□□ -1.11
ARFGEF1-201ENST00000262215 C9orf163Q8N9P6 203 aa8.11□□□□□ -1.11
ARFGEF1-201ENST00000262215 MTORP42345 2549 aa8.09□□□□□ -1.11
ARFGEF1-201ENST00000262215 CASC10Q5T4H9 136 aa8.09□□□□□ -1.11
ARFGEF1-201ENST00000262215 PSORS1C2Q9UIG4 136 aa8.09□□□□□ -1.11
ARFGEF1-201ENST00000262215 USP9YO00507 2555 aaPredicted RBP8.09□□□□□ -1.11
ARFGEF1-201ENST00000262215 A0A087WTM6 91 aa8.08□□□□□ -1.12
ARFGEF1-201ENST00000262215 Q1T7F1 81 aa8.08□□□□□ -1.12
ARFGEF1-201ENST00000262215 SPTBN4Q9H254 2564 aa8.07□□□□□ -1.12
ARFGEF1-201ENST00000262215 K7EIL1 84 aa8.07□□□□□ -1.12
ARFGEF1-201ENST00000262215 IGLV7-43P04211 117 aa8.07□□□□□ -1.12
ARFGEF1-201ENST00000262215 POLQO75417 2590 aa8.06□□□□□ -1.12
ARFGEF1-201ENST00000262215 CENPFP49454 3210 aa8.05□□□□□ -1.12
ARFGEF1-201ENST00000262215 LINC00483Q53H64 154 aa8.05□□□□□ -1.12
ARFGEF1-201ENST00000262215 Q6ZSA8 131 aa8.04□□□□□ -1.12
ARFGEF1-201ENST00000262215 CHD8Q9HCK8 2581 aa8.04□□□□□ -1.12
ARFGEF1-201ENST00000262215 A0A1W2PNM2 257 aa8.03□□□□□ -1.12
ARFGEF1-201ENST00000262215 TLX1NBP0CAT3 122 aa8.02□□□□□ -1.13
ARFGEF1-201ENST00000262215 PRAC1Q96KF2 57 aa8.02□□□□□ -1.13
ARFGEF1-201ENST00000262215 SPRR4Q96PI1 79 aa8.01□□□□□ -1.13
ARFGEF1-201ENST00000262215 H3BS24 57 aa8□□□□□ -1.13
ARFGEF1-201ENST00000262215 A0A1B0GU33 70 aa7.99□□□□□ -1.13
ARFGEF1-201ENST00000262215 Q5XG85 94 aa7.99□□□□□ -1.13
ARFGEF1-201ENST00000262215 CYSTM1Q9H1C7 97 aa7.98□□□□□ -1.13
ARFGEF1-201ENST00000262215 USP24Q9UPU5 2620 aa7.97□□□□□ -1.13
ARFGEF1-201ENST00000262215 PRR34Q9NV39 138 aa7.97□□□□□ -1.13
ARFGEF1-201ENST00000262215 LINC00612Q8N6U2 182 aa7.95□□□□□ -1.14
ARFGEF1-201ENST00000262215 ANKRD11Q6UB99 2663 aaPredicted RBP7.95□□□□□ -1.14
ARFGEF1-201ENST00000262215 FAM229BQ4G0N7 80 aa7.94□□□□□ -1.14
ARFGEF1-201ENST00000262215 KRTAP10-3P60369 221 aa7.93□□□□□ -1.14
ARFGEF1-201ENST00000262215 PLA2G2DQ9UNK4 145 aa7.93□□□□□ -1.14
ARFGEF1-201ENST00000262215 CR1P17927 2039 aa7.93□□□□□ -1.14
ARFGEF1-201ENST00000262215 SPANXA2-OT1Q8N9U9 137 aa7.92□□□□□ -1.14
ARFGEF1-201ENST00000262215 ANKRD17O75179 2603 aaKnown RBP7.92□□□□□ -1.14
ARFGEF1-201ENST00000262215 IGLV7-46A0A075B6I9 117 aa7.92□□□□□ -1.14
ARFGEF1-201ENST00000262215 HRES1P13985 223 aa7.91□□□□□ -1.14
ARFGEF1-201ENST00000262215 GIG44P09565 113 aaPredicted RBP7.9□□□□□ -1.14
ARFGEF1-201ENST00000262215 CEP295Q9C0D2 2601 aa7.89□□□□□ -1.15
ARFGEF1-201ENST00000262215 FASNP49327 2511 aaKnown RBP7.89□□□□□ -1.15
ARFGEF1-201ENST00000262215 CSAG1Q6PB30 78 aa7.88□□□□□ -1.15
ARFGEF1-201ENST00000262215 FP248Q71RG6 208 aaPredicted RBP7.88□□□□□ -1.15
ARFGEF1-201ENST00000262215 A0A0A0MQY5 61 aa7.88□□□□□ -1.15
ARFGEF1-201ENST00000262215 C19orf73Q9NVV2 129 aa7.88□□□□□ -1.15
ARFGEF1-201ENST00000262215 SPINK7P58062 85 aa7.88□□□□□ -1.15
ARFGEF1-201ENST00000262215 TNP2Q05952 138 aa7.86□□□□□ -1.15
ARFGEF1-201ENST00000262215 OCR1Q9BZK8 76 aa7.85□□□□□ -1.15
ARFGEF1-201ENST00000262215 Q8N9P0 234 aaPredicted RBP7.85□□□□□ -1.15
ARFGEF1-201ENST00000262215 BPTFQ12830 3046 aa7.85□□□□□ -1.15
ARFGEF1-201ENST00000262215 FLG2Q5D862 2391 aaPredicted RBP7.84□□□□□ -1.15
ARFGEF1-201ENST00000262215 S4R3F8 94 aa7.83□□□□□ -1.16
ARFGEF1-201ENST00000262215 OXTP01178 125 aa7.82□□□□□ -1.16
ARFGEF1-201ENST00000262215 COL4A2P08572 1712 aa7.82□□□□□ -1.16
ARFGEF1-201ENST00000262215 MGAM2Q2M2H8 2515 aa7.81□□□□□ -1.16
ARFGEF1-201ENST00000262215 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.81□□□□□ -1.16
ARFGEF1-201ENST00000262215 CNBPP62633 177 aaKnown RBP7.8□□□□□ -1.16
ARFGEF1-201ENST00000262215 KLK9Q2XQG4 91 aa7.8□□□□□ -1.16
ARFGEF1-201ENST00000262215 R4GN34 69 aa7.79□□□□□ -1.16
ARFGEF1-201ENST00000262215 Q75L30 129 aa7.78□□□□□ -1.16
ARFGEF1-201ENST00000262215 DMAC1Q96GE9 116 aa7.76□□□□□ -1.17
ARFGEF1-201ENST00000262215 A0A096LNT2 108 aa7.74□□□□□ -1.17
ARFGEF1-201ENST00000262215 EPG5Q9HCE0 2579 aa7.73□□□□□ -1.17
ARFGEF1-201ENST00000262215 ZCCHC13Q8WW36 166 aaKnown RBP7.73□□□□□ -1.17
ARFGEF1-201ENST00000262215 H1FX-AS1Q4G0G2 97 aa7.72□□□□□ -1.17
ARFGEF1-201ENST00000262215 GOLGB1Q14789 3259 aaKnown RBP7.72□□□□□ -1.17
ARFGEF1-201ENST00000262215 Q5VV11 94 aa7.71□□□□□ -1.18
ARFGEF1-201ENST00000262215 EP400Q96L91 3159 aa7.69□□□□□ -1.18
ARFGEF1-201ENST00000262215 LINC01558Q9Y6Z2 57 aa7.69□□□□□ -1.18
ARFGEF1-201ENST00000262215 ATRQ13535 2644 aa7.69□□□□□ -1.18
ARFGEF1-201ENST00000262215 MMP24-AS1A0A0U1RRL7 71 aa7.68□□□□□ -1.18
ARFGEF1-201ENST00000262215 Q5W150 140 aa7.67□□□□□ -1.18
ARFGEF1-201ENST00000262215 M0QZ58 72 aa7.66□□□□□ -1.18
ARFGEF1-201ENST00000262215 PCSK5Q92824 1860 aa7.63□□□□□ -1.19
ARFGEF1-201ENST00000262215 SPATA8Q6RVD6 105 aa7.62□□□□□ -1.19
ARFGEF1-201ENST00000262215 ROMO1P60602 79 aa7.61□□□□□ -1.19
ARFGEF1-201ENST00000262215 Q8NDZ9 215 aa7.61□□□□□ -1.19
ARFGEF1-201ENST00000262215 RPL37P61927 97 aaKnown RBP7.59□□□□□ -1.19
ARFGEF1-201ENST00000262215 PLAC4Q8WY50 150 aa7.58□□□□□ -1.2
ARFGEF1-201ENST00000262215 HECTD1Q9ULT8 2610 aa7.57□□□□□ -1.2
ARFGEF1-201ENST00000262215 FLNBO75369 2602 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms