RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 IGLV6-57P01721 117 aa10.67□□□□□ -0.7
PRPF40B-201ENST00000261897 CSNK1G2-AS1Q8NCQ2 148 aa10.67□□□□□ -0.7
PRPF40B-201ENST00000261897 IGKV4-1P06312 121 aa10.66□□□□□ -0.7
PRPF40B-201ENST00000261897 HELZ2Q9BYK8 2649 aaKnown RBP10.66□□□□□ -0.7
PRPF40B-201ENST00000261897 RETNQ9HD89 108 aa10.66□□□□□ -0.7
PRPF40B-201ENST00000261897 M0R378 163 aa10.65□□□□□ -0.7
PRPF40B-201ENST00000261897 CHKB-CPT1BH3BT56 60 aa10.65□□□□□ -0.71
PRPF40B-201ENST00000261897 SPART-AS1P0CW21 52 aa10.65□□□□□ -0.71
PRPF40B-201ENST00000261897 LINC00208Q96KT6 92 aa10.64□□□□□ -0.71
PRPF40B-201ENST00000261897 C1orf137Q5JT78 98 aa10.64□□□□□ -0.71
PRPF40B-201ENST00000261897 VWFP04275 2813 aa10.64□□□□□ -0.71
PRPF40B-201ENST00000261897 A8MUN3 132 aa10.64□□□□□ -0.71
PRPF40B-201ENST00000261897 C1orf64Q8NEQ6 169 aa10.63□□□□□ -0.71
PRPF40B-201ENST00000261897 KPRPQ5T749 579 aaPredicted RBP10.63□□□□□ -0.71
PRPF40B-201ENST00000261897 ST20-AS1Q8NBB2 130 aa10.63□□□□□ -0.71
PRPF40B-201ENST00000261897 ELOF1P60002 83 aaKnown RBP10.62□□□□□ -0.71
PRPF40B-201ENST00000261897 X6R8D5 127 aa10.62□□□□□ -0.71
PRPF40B-201ENST00000261897 BCE1O60756 84 aa10.62□□□□□ -0.71
PRPF40B-201ENST00000261897 MP68P56378 58 aa10.6□□□□□ -0.71
PRPF40B-201ENST00000261897 C19orf73Q9NVV2 129 aa10.6□□□□□ -0.71
PRPF40B-201ENST00000261897 MAST4O15021 2626 aa10.6□□□□□ -0.71
PRPF40B-201ENST00000261897 EPM2AB3EWF7 344 aa10.6□□□□□ -0.71
PRPF40B-201ENST00000261897 LELP1Q5T871 98 aa10.59□□□□□ -0.71
PRPF40B-201ENST00000261897 H3BQ85 93 aa10.59□□□□□ -0.71
PRPF40B-201ENST00000261897 SMR3AQ99954 134 aa10.59□□□□□ -0.71
PRPF40B-201ENST00000261897 C9orf66Q5T8R8 295 aa10.58□□□□□ -0.72
PRPF40B-201ENST00000261897 LYRM9A8MSI8 78 aa10.58□□□□□ -0.72
PRPF40B-201ENST00000261897 IGKV2-24A0A0C4DH68 120 aa10.58□□□□□ -0.72
PRPF40B-201ENST00000261897 K7EQZ3 153 aa10.58□□□□□ -0.72
PRPF40B-201ENST00000261897 APOC4P55056 127 aa10.57□□□□□ -0.72
PRPF40B-201ENST00000261897 OCR1Q9BZK8 76 aa10.57□□□□□ -0.72
PRPF40B-201ENST00000261897 SYCNQ0VAF6 134 aa10.57□□□□□ -0.72
PRPF40B-201ENST00000261897 FLNBO75369 2602 aaKnown RBP10.57□□□□□ -0.72
PRPF40B-201ENST00000261897 MGAM2Q2M2H8 2515 aa10.56□□□□□ -0.72
PRPF40B-201ENST00000261897 VPREB1P12018 145 aa10.56□□□□□ -0.72
PRPF40B-201ENST00000261897 PRR15LQ9BU68 103 aa10.56□□□□□ -0.72
PRPF40B-201ENST00000261897 F8WDY8 70 aa10.56□□□□□ -0.72
PRPF40B-201ENST00000261897 IGHV4-30-4P0DP06 118 aa10.56□□□□□ -0.72
PRPF40B-201ENST00000261897 PKD1L1Q8TDX9 2849 aa10.55□□□□□ -0.72
PRPF40B-201ENST00000261897 A6NED7 52 aa10.54□□□□□ -0.72
PRPF40B-201ENST00000261897 RPL37AP61513 92 aaKnown RBP10.54□□□□□ -0.72
PRPF40B-201ENST00000261897 Q6ZRP5 223 aa10.54□□□□□ -0.72
PRPF40B-201ENST00000261897 TRAV22A0A0B4J277 110 aa10.53□□□□□ -0.72
PRPF40B-201ENST00000261897 LINC00528Q8N1L1 170 aa10.53□□□□□ -0.72
PRPF40B-201ENST00000261897 FAM168BA1KXE4 195 aa10.52□□□□□ -0.72
PRPF40B-201ENST00000261897 LINC00612Q8N6U2 182 aa10.52□□□□□ -0.72
PRPF40B-201ENST00000261897 C7orf33Q8WU49 177 aa10.52□□□□□ -0.72
PRPF40B-201ENST00000261897 FSHBP01225 129 aa10.52□□□□□ -0.73
PRPF40B-201ENST00000261897 A0A087WSZ3 146 aa10.52□□□□□ -0.73
PRPF40B-201ENST00000261897 EGFEM1PQ0D2K5 195 aa10.52□□□□□ -0.73
PRPF40B-201ENST00000261897 MRPL55Q7Z7F7 128 aaKnown RBP10.52□□□□□ -0.73
PRPF40B-201ENST00000261897 A8MU10 97 aa10.51□□□□□ -0.73
PRPF40B-201ENST00000261897 Q8N377 158 aa10.51□□□□□ -0.73
PRPF40B-201ENST00000261897 H0Y9J4 135 aa10.51□□□□□ -0.73
PRPF40B-201ENST00000261897 Q6ZTC4 211 aa10.51□□□□□ -0.73
PRPF40B-201ENST00000261897 SERTAD4-AS1Q5TG53 156 aa10.5□□□□□ -0.73
PRPF40B-201ENST00000261897 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.49□□□□□ -0.73
PRPF40B-201ENST00000261897 NDUFS5O43920 106 aa10.49□□□□□ -0.73
PRPF40B-201ENST00000261897 PCOTHQ58A44 107 aa10.49□□□□□ -0.73
PRPF40B-201ENST00000261897 hDV103S1A0JD37 113 aa10.48□□□□□ -0.73
PRPF40B-201ENST00000261897 PSCAO43653 123 aa10.48□□□□□ -0.73
PRPF40B-201ENST00000261897 A0A1W2PNM2 257 aa10.47□□□□□ -0.73
PRPF40B-201ENST00000261897 HCG22E2RYF7 251 aa10.46□□□□□ -0.73
PRPF40B-201ENST00000261897 PRLHP81277 87 aa10.46□□□□□ -0.74
PRPF40B-201ENST00000261897 STAB1Q9NY15 2570 aa10.45□□□□□ -0.74
PRPF40B-201ENST00000261897 NSD1Q96L73 2696 aaPredicted RBP10.44□□□□□ -0.74
PRPF40B-201ENST00000261897 ERC2-IT1O76042 136 aa10.43□□□□□ -0.74
PRPF40B-201ENST00000261897 B9D2Q9BPU9 175 aa10.43□□□□□ -0.74
PRPF40B-201ENST00000261897 Q8NBF4 154 aa10.41□□□□□ -0.74
PRPF40B-201ENST00000261897 H0Y9P7 68 aa10.41□□□□□ -0.74
PRPF40B-201ENST00000261897 DHRS4-AS1Q9P1J3 65 aa10.4□□□□□ -0.74
PRPF40B-201ENST00000261897 TENM1Q9UKZ4 2725 aa10.4□□□□□ -0.74
PRPF40B-201ENST00000261897 AKAP9Q99996 3911 aa10.38□□□□□ -0.75
PRPF40B-201ENST00000261897 UBE2AP49459 152 aa10.38□□□□□ -0.75
PRPF40B-201ENST00000261897 OXLD1Q5BKU9 147 aa10.38□□□□□ -0.75
PRPF40B-201ENST00000261897 C15orf56Q8N910 161 aa10.37□□□□□ -0.75
PRPF40B-201ENST00000261897 LINC00476Q8WZB0 136 aa10.37□□□□□ -0.75
PRPF40B-201ENST00000261897 PRR34Q9NV39 138 aa10.37□□□□□ -0.75
PRPF40B-201ENST00000261897 DSCR10P59022 87 aa10.36□□□□□ -0.75
PRPF40B-201ENST00000261897 Q6ZRX8 168 aa10.36□□□□□ -0.75
PRPF40B-201ENST00000261897 NDUFB1O75438 58 aa10.36□□□□□ -0.75
PRPF40B-201ENST00000261897 CASC2Q6XLA1 102 aa10.36□□□□□ -0.75
PRPF40B-201ENST00000261897 NBPF19A0A087WUL8 3843 aa10.35□□□□□ -0.75
PRPF40B-201ENST00000261897 SPAG11AQ6PDA7 123 aa10.35□□□□□ -0.75
PRPF40B-201ENST00000261897 Q8NAQ8 132 aa10.35□□□□□ -0.75
PRPF40B-201ENST00000261897 DEFB131BA0A096LNP1 70 aa10.35□□□□□ -0.75
PRPF40B-201ENST00000261897 GVQW2A0A096LPI5 108 aaPredicted RBP10.35□□□□□ -0.75
PRPF40B-201ENST00000261897 Q9BRP9 147 aa10.34□□□□□ -0.75
PRPF40B-201ENST00000261897 TENM3Q9P273 2699 aa10.32□□□□□ -0.76
PRPF40B-201ENST00000261897 KRTAP10-3P60369 221 aa10.32□□□□□ -0.76
PRPF40B-201ENST00000261897 PRR15Q8IV56 129 aa10.31□□□□□ -0.76
PRPF40B-201ENST00000261897 CASC10Q5T4H9 136 aa10.3□□□□□ -0.76
PRPF40B-201ENST00000261897 SRRM2Q9UQ35 2752 aaKnown RBP10.3□□□□□ -0.76
PRPF40B-201ENST00000261897 FBN1P35555 2871 aaKnown RBP10.29□□□□□ -0.76
PRPF40B-201ENST00000261897 INAFM1C9JVW0 142 aa10.28□□□□□ -0.76
PRPF40B-201ENST00000261897 KCNQ1DNQ9H478 68 aa10.28□□□□□ -0.76
PRPF40B-201ENST00000261897 Q1T7F1 81 aa10.27□□□□□ -0.76
PRPF40B-201ENST00000261897 REG3GQ6UW15 175 aa10.27□□□□□ -0.77
PRPF40B-201ENST00000261897 C11orf45Q8TAV5 145 aa10.26□□□□□ -0.77
PRPF40B-201ENST00000261897 IGLV5-48A0A075B6I7 105 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms