RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 F8WEM9 126 aa3.2□□□□□ -1.9
USP44-201ENST00000258499 HRCT1Q6UXD1 115 aa3.2□□□□□ -1.9
USP44-201ENST00000258499 EGFEM1PQ0D2K5 195 aa3.2□□□□□ -1.9
USP44-201ENST00000258499 LINC00612Q8N6U2 182 aa3.2□□□□□ -1.9
USP44-201ENST00000258499 RMI2Q96E14 147 aa3.2□□□□□ -1.9
USP44-201ENST00000258499 CYSTM1Q9H1C7 97 aa3.2□□□□□ -1.9
USP44-201ENST00000258499 C2orf48Q96LS8 159 aa3.19□□□□□ -1.9
USP44-201ENST00000258499 TRAV10A0A0B4J240 114 aa3.19□□□□□ -1.9
USP44-201ENST00000258499 NDUFC2-KCTD14E9PQ53 114 aa3.19□□□□□ -1.9
USP44-201ENST00000258499 H3BQ85 93 aa3.19□□□□□ -1.9
USP44-201ENST00000258499 TRAV7A0A075B6U4 112 aa3.19□□□□□ -1.9
USP44-201ENST00000258499 OBSCN-AS1Q96MR7 158 aa3.18□□□□□ -1.9
USP44-201ENST00000258499 IGLV6-57P01721 117 aa3.18□□□□□ -1.9
USP44-201ENST00000258499 ESRGQ1W209 222 aa3.18□□□□□ -1.9
USP44-201ENST00000258499 UBE2DNLQ8IWF7 75 aa3.18□□□□□ -1.9
USP44-201ENST00000258499 VWFP04275 2813 aa3.18□□□□□ -1.9
USP44-201ENST00000258499 COL6A5A8TX70 2615 aa3.18□□□□□ -1.9
USP44-201ENST00000258499 HIGD2AQ9BW72 106 aa3.18□□□□□ -1.9
USP44-201ENST00000258499 BAHCC1Q9P281 2608 aa3.18□□□□□ -1.9
USP44-201ENST00000258499 C5orf47Q569G3 176 aa3.17□□□□□ -1.9
USP44-201ENST00000258499 MPLKIPQ8TAP9 179 aa3.17□□□□□ -1.9
USP44-201ENST00000258499 A0A096LNI7 61 aa3.17□□□□□ -1.9
USP44-201ENST00000258499 C4orf26Q17RF5 130 aa3.17□□□□□ -1.9
USP44-201ENST00000258499 TM2D3Q9BRN9 247 aa3.17□□□□□ -1.9
USP44-201ENST00000258499 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.16□□□□□ -1.9
USP44-201ENST00000258499 VPREB1P12018 145 aa3.16□□□□□ -1.9
USP44-201ENST00000258499 ELOF1P60002 83 aaKnown RBP3.16□□□□□ -1.9
USP44-201ENST00000258499 Q6ZRP5 223 aa3.16□□□□□ -1.9
USP44-201ENST00000258499 PRR34Q9NV39 138 aa3.16□□□□□ -1.9
USP44-201ENST00000258499 LOC110117498A0A087WWA1 95 aa3.16□□□□□ -1.9
USP44-201ENST00000258499 PRR4Q16378 134 aa3.16□□□□□ -1.9
USP44-201ENST00000258499 FAM30AQ9NZY2 134 aa3.16□□□□□ -1.9
USP44-201ENST00000258499 LINC00167Q96N53 147 aa3.16□□□□□ -1.9
USP44-201ENST00000258499 C7orf33Q8WU49 177 aa3.16□□□□□ -1.9
USP44-201ENST00000258499 NBPF19A0A087WUL8 3843 aa3.15□□□□□ -1.9
USP44-201ENST00000258499 NSD1Q96L73 2696 aaPredicted RBP3.15□□□□□ -1.9
USP44-201ENST00000258499 CXCL6P80162 114 aa3.15□□□□□ -1.9
USP44-201ENST00000258499 C1orf137Q5JT78 98 aa3.15□□□□□ -1.9
USP44-201ENST00000258499 DEFB116Q30KQ4 102 aa3.15□□□□□ -1.91
USP44-201ENST00000258499 C4orf48Q5BLP8 95 aa3.15□□□□□ -1.91
USP44-201ENST00000258499 TMEM254Q8TBM7 123 aa3.15□□□□□ -1.91
USP44-201ENST00000258499 LRCOL1A6NCL2 159 aa3.15□□□□□ -1.91
USP44-201ENST00000258499 KRTAP5-3Q6L8H2 238 aa3.15□□□□□ -1.91
USP44-201ENST00000258499 GVQW2A0A096LPI5 108 aaPredicted RBP3.14□□□□□ -1.91
USP44-201ENST00000258499 SERTAD4-AS1Q5TG53 156 aa3.14□□□□□ -1.91
USP44-201ENST00000258499 FAM168BA1KXE4 195 aa3.14□□□□□ -1.91
USP44-201ENST00000258499 RPS28P62857 69 aaKnown RBP3.14□□□□□ -1.91
USP44-201ENST00000258499 WFDC13Q8IUB5 93 aa3.14□□□□□ -1.91
USP44-201ENST00000258499 C15orf56Q8N910 161 aa3.14□□□□□ -1.91
USP44-201ENST00000258499 ST20-AS1Q8NBB2 130 aa3.14□□□□□ -1.91
USP44-201ENST00000258499 DHRS4-AS1Q9P1J3 65 aa3.14□□□□□ -1.91
USP44-201ENST00000258499 TENM1Q9UKZ4 2725 aa3.14□□□□□ -1.91
USP44-201ENST00000258499 BRK1Q8WUW1 75 aa3.14□□□□□ -1.91
USP44-201ENST00000258499 LINC00528Q8N1L1 170 aa3.13□□□□□ -1.91
USP44-201ENST00000258499 SERP1Q9Y6X1 66 aa3.13□□□□□ -1.91
USP44-201ENST00000258499 TRBV7-4A0A0J9YYF1 115 aa3.13□□□□□ -1.91
USP44-201ENST00000258499 LINC01556Q5JQF7 62 aa3.13□□□□□ -1.91
USP44-201ENST00000258499 A0A0G2JQZ4 141 aa3.12□□□□□ -1.91
USP44-201ENST00000258499 A0A1W2PNN7 141 aa3.12□□□□□ -1.91
USP44-201ENST00000258499 H7BZZ5 65 aa3.12□□□□□ -1.91
USP44-201ENST00000258499 NDUFC1O43677 76 aa3.12□□□□□ -1.91
USP44-201ENST00000258499 PRLHP81277 87 aa3.12□□□□□ -1.91
USP44-201ENST00000258499 TENM4Q6N022 2769 aa3.12□□□□□ -1.91
USP44-201ENST00000258499 A0A0U1RQV1 116 aa3.12□□□□□ -1.91
USP44-201ENST00000258499 KRTAP10-11P60412 298 aa3.12□□□□□ -1.91
USP44-201ENST00000258499 SMIM29Q86T20 159 aa3.12□□□□□ -1.91
USP44-201ENST00000258499 SMIM26A0A096LP01 95 aa3.12□□□□□ -1.91
USP44-201ENST00000258499 PRYO14603 147 aa3.12□□□□□ -1.91
USP44-201ENST00000258499 UBE2AP49459 152 aa3.12□□□□□ -1.91
USP44-201ENST00000258499 MRPL55Q7Z7F7 128 aaKnown RBP3.12□□□□□ -1.91
USP44-201ENST00000258499 PKIGQ9Y2B9 76 aa3.12□□□□□ -1.91
USP44-201ENST00000258499 TRBV7-6A0A0J9YX20 115 aa3.11□□□□□ -1.91
USP44-201ENST00000258499 CASC10Q5T4H9 136 aa3.11□□□□□ -1.91
USP44-201ENST00000258499 OTOGQ6ZRI0 2925 aa3.11□□□□□ -1.91
USP44-201ENST00000258499 A0A087WSZ3 146 aa3.11□□□□□ -1.91
USP44-201ENST00000258499 Q8N377 158 aa3.11□□□□□ -1.91
USP44-201ENST00000258499 Q6ZRX8 168 aa3.11□□□□□ -1.91
USP44-201ENST00000258499 PDZD2O15018 2839 aa3.11□□□□□ -1.91
USP44-201ENST00000258499 H0Y9J4 135 aa3.1□□□□□ -1.91
USP44-201ENST00000258499 MP68P56378 58 aa3.1□□□□□ -1.91
USP44-201ENST00000258499 REG3GQ6UW15 175 aa3.1□□□□□ -1.91
USP44-201ENST00000258499 H3BNG1 76 aa3.1□□□□□ -1.91
USP44-201ENST00000258499 OXTP01178 125 aa3.1□□□□□ -1.91
USP44-201ENST00000258499 LINC00474Q9P2X8 69 aa3.1□□□□□ -1.91
USP44-201ENST00000258499 LINC00588Q9Y4M8 146 aa3.1□□□□□ -1.91
USP44-201ENST00000258499 KLKP1Q107X0 134 aa3.1□□□□□ -1.91
USP44-201ENST00000258499 KRTAP24-1Q3LI83 254 aa3.09□□□□□ -1.91
USP44-201ENST00000258499 KCNQ1DNQ9H478 68 aa3.09□□□□□ -1.91
USP44-201ENST00000258499 ZNF469Q96JG9 3925 aaPredicted RBP3.09□□□□□ -1.91
USP44-201ENST00000258499 BCE1O60756 84 aa3.09□□□□□ -1.91
USP44-201ENST00000258499 ERC2-IT1O76042 136 aa3.09□□□□□ -1.92
USP44-201ENST00000258499 IGKV4-1P06312 121 aa3.09□□□□□ -1.92
USP44-201ENST00000258499 Q8NBF4 154 aa3.09□□□□□ -1.92
USP44-201ENST00000258499 FBN1P35555 2871 aaKnown RBP3.09□□□□□ -1.92
USP44-201ENST00000258499 TENM3Q9P273 2699 aa3.09□□□□□ -1.92
USP44-201ENST00000258499 PKD1L1Q8TDX9 2849 aa3.09□□□□□ -1.92
USP44-201ENST00000258499 F8WDY8 70 aa3.09□□□□□ -1.92
USP44-201ENST00000258499 NDUFS5O43920 106 aa3.09□□□□□ -1.92
USP44-201ENST00000258499 ATP5EP56381 51 aaPredicted RBP3.08□□□□□ -1.92
USP44-201ENST00000258499 A0A1W2PNM2 257 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms