RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 PLXNB1O43157 2135 aa5.59□□□□□ -1.51
DSG3-201ENST00000257189 Q1T7F1 81 aa5.59□□□□□ -1.51
DSG3-201ENST00000257189 ATG2AQ2TAZ0 1938 aa5.59□□□□□ -1.51
DSG3-201ENST00000257189 TET2Q6N021 2002 aaPredicted RBP5.59□□□□□ -1.51
DSG3-201ENST00000257189 IGLV8-61A0A075B6I0 122 aa5.59□□□□□ -1.51
DSG3-201ENST00000257189 LITAFQ99732 161 aa5.59□□□□□ -1.51
DSG3-201ENST00000257189 HCFC1P51610 2035 aa5.58□□□□□ -1.52
DSG3-201ENST00000257189 ATRQ13535 2644 aa5.58□□□□□ -1.52
DSG3-201ENST00000257189 K7EQZ3 153 aa5.57□□□□□ -1.52
DSG3-201ENST00000257189 RPL37AP61513 92 aaKnown RBP5.57□□□□□ -1.52
DSG3-201ENST00000257189 SPACA4Q8TDM5 124 aa5.57□□□□□ -1.52
DSG3-201ENST00000257189 NUP210LQ5VU65 1888 aa5.56□□□□□ -1.52
DSG3-201ENST00000257189 K7EIL1 84 aa5.56□□□□□ -1.52
DSG3-201ENST00000257189 TRIOO75962 3097 aa5.55□□□□□ -1.52
DSG3-201ENST00000257189 C8orf17Q9NRJ1 99 aa5.55□□□□□ -1.52
DSG3-201ENST00000257189 ST20-AS1Q8NBB2 130 aa5.54□□□□□ -1.52
DSG3-201ENST00000257189 USP9YO00507 2555 aaPredicted RBP5.53□□□□□ -1.52
DSG3-201ENST00000257189 KCNQ1DNQ9H478 68 aa5.53□□□□□ -1.52
DSG3-201ENST00000257189 APLNQ9ULZ1 77 aa5.53□□□□□ -1.52
DSG3-201ENST00000257189 NBDYA0A0U1RRE5 68 aa5.53□□□□□ -1.52
DSG3-201ENST00000257189 CHD9Q3L8U1 2897 aa5.52□□□□□ -1.53
DSG3-201ENST00000257189 CFAP54Q96N23 3096 aa5.52□□□□□ -1.53
DSG3-201ENST00000257189 RBM12B-AS1Q9P1G2 102 aa5.52□□□□□ -1.53
DSG3-201ENST00000257189 MUC22E2RYF6 1773 aaPredicted RBP5.52□□□□□ -1.53
DSG3-201ENST00000257189 UNC79Q9P2D8 2635 aa5.52□□□□□ -1.53
DSG3-201ENST00000257189 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
DSG3-201ENST00000257189 A0A1B0GVX0 72 aa5.52□□□□□ -1.53
DSG3-201ENST00000257189 LINC00528Q8N1L1 170 aa5.52□□□□□ -1.53
DSG3-201ENST00000257189 PTPRBP23467 1997 aa5.51□□□□□ -1.53
DSG3-201ENST00000257189 Q96NJ1 140 aa5.51□□□□□ -1.53
DSG3-201ENST00000257189 ACANP16112 2415 aa5.5□□□□□ -1.53
DSG3-201ENST00000257189 LRP4O75096 1905 aa5.5□□□□□ -1.53
DSG3-201ENST00000257189 Q75L30 129 aa5.5□□□□□ -1.53
DSG3-201ENST00000257189 AGRNO00468 2067 aa5.5□□□□□ -1.53
DSG3-201ENST00000257189 H3BS24 57 aa5.5□□□□□ -1.53
DSG3-201ENST00000257189 TYMSOSQ8TAI1 123 aa5.49□□□□□ -1.53
DSG3-201ENST00000257189 FAM104AQ969W3 186 aa5.49□□□□□ -1.53
DSG3-201ENST00000257189 SZT2Q5T011 3432 aa5.49□□□□□ -1.53
DSG3-201ENST00000257189 C9orf129Q5T035 196 aaKnown RBP5.49□□□□□ -1.53
DSG3-201ENST00000257189 COL4A2P08572 1712 aa5.48□□□□□ -1.53
DSG3-201ENST00000257189 WDFY4Q6ZS81 3184 aa5.48□□□□□ -1.53
DSG3-201ENST00000257189 IGLV1-50A0A075B6I6 118 aa5.48□□□□□ -1.53
DSG3-201ENST00000257189 DNAH14Q0VDD8 3507 aa5.48□□□□□ -1.53
DSG3-201ENST00000257189 M0R2T5 61 aa5.48□□□□□ -1.53
DSG3-201ENST00000257189 KLK9Q2XQG4 91 aa5.48□□□□□ -1.53
DSG3-201ENST00000257189 CASC10Q5T4H9 136 aa5.48□□□□□ -1.53
DSG3-201ENST00000257189 IGFL1Q6UW32 110 aa5.47□□□□□ -1.53
DSG3-201ENST00000257189 DMAC1Q96GE9 116 aa5.47□□□□□ -1.53
DSG3-201ENST00000257189 PLA2G2DQ9UNK4 145 aa5.47□□□□□ -1.53
DSG3-201ENST00000257189 SMR3BP02814 79 aaPredicted RBP5.46□□□□□ -1.53
DSG3-201ENST00000257189 PHF5AQ7RTV0 110 aaKnown RBP5.46□□□□□ -1.53
DSG3-201ENST00000257189 BPTFQ12830 3046 aa5.46□□□□□ -1.53
DSG3-201ENST00000257189 RTL8CO15255 209 aa5.46□□□□□ -1.54
DSG3-201ENST00000257189 C15orf56Q8N910 161 aa5.45□□□□□ -1.54
DSG3-201ENST00000257189 VCANP13611 3396 aa5.45□□□□□ -1.54
DSG3-201ENST00000257189 CELSR3Q9NYQ7 3312 aa5.44□□□□□ -1.54
DSG3-201ENST00000257189 ANKRD17O75179 2603 aaKnown RBP5.44□□□□□ -1.54
DSG3-201ENST00000257189 LCE6AA0A183 80 aa5.44□□□□□ -1.54
DSG3-201ENST00000257189 LINC00483Q53H64 154 aa5.44□□□□□ -1.54
DSG3-201ENST00000257189 OBSCN-AS1Q96MR7 158 aa5.43□□□□□ -1.54
DSG3-201ENST00000257189 DNAH10OSP0CZ25 163 aa5.42□□□□□ -1.54
DSG3-201ENST00000257189 LINC01558Q9Y6Z2 57 aa5.42□□□□□ -1.54
DSG3-201ENST00000257189 TEP1Q99973 2627 aaKnown RBP5.42□□□□□ -1.54
DSG3-201ENST00000257189 TLX1NBP0CAT3 122 aa5.42□□□□□ -1.54
DSG3-201ENST00000257189 Q8N377 158 aa5.42□□□□□ -1.54
DSG3-201ENST00000257189 IGLV7-46A0A075B6I9 117 aa5.41□□□□□ -1.54
DSG3-201ENST00000257189 VPS13AQ96RL7 3174 aa5.41□□□□□ -1.54
DSG3-201ENST00000257189 ASB16-AS1Q495Z4 193 aa5.41□□□□□ -1.54
DSG3-201ENST00000257189 OCR1Q9BZK8 76 aa5.41□□□□□ -1.54
DSG3-201ENST00000257189 SPEGQ15772 3267 aa5.4□□□□□ -1.54
DSG3-201ENST00000257189 EXPH5Q8NEV8 1989 aa5.4□□□□□ -1.54
DSG3-201ENST00000257189 RAI1Q7Z5J4 1906 aaPredicted RBP5.4□□□□□ -1.55
DSG3-201ENST00000257189 KRTAP10-11P60412 298 aa5.4□□□□□ -1.55
DSG3-201ENST00000257189 DSCR10P59022 87 aa5.39□□□□□ -1.55
DSG3-201ENST00000257189 CHTF8P0CG12 524 aa5.39□□□□□ -1.55
DSG3-201ENST00000257189 LAMA1P25391 3075 aa5.38□□□□□ -1.55
DSG3-201ENST00000257189 Q5XG85 94 aa5.38□□□□□ -1.55
DSG3-201ENST00000257189 TRANK1O15050 2925 aa5.38□□□□□ -1.55
DSG3-201ENST00000257189 IGLV5-48A0A075B6I7 105 aa5.38□□□□□ -1.55
DSG3-201ENST00000257189 PRR34Q9NV39 138 aa5.37□□□□□ -1.55
DSG3-201ENST00000257189 USP24Q9UPU5 2620 aa5.37□□□□□ -1.55
DSG3-201ENST00000257189 C9orf163Q8N9P6 203 aa5.37□□□□□ -1.55
DSG3-201ENST00000257189 CSNK1G2-AS1Q8NCQ2 148 aa5.37□□□□□ -1.55
DSG3-201ENST00000257189 ZNF861PO60384 105 aa5.36□□□□□ -1.55
DSG3-201ENST00000257189 EYSQ5T1H1 3165 aa5.36□□□□□ -1.55
DSG3-201ENST00000257189 KRTAP1-3Q8IUG1 177 aa5.36□□□□□ -1.55
DSG3-201ENST00000257189 A0A1B0GU33 70 aa5.35□□□□□ -1.55
DSG3-201ENST00000257189 Q8NAQ8 132 aa5.35□□□□□ -1.55
DSG3-201ENST00000257189 MGAQ8IWI9 3026 aa5.35□□□□□ -1.55
DSG3-201ENST00000257189 C19orf73Q9NVV2 129 aa5.34□□□□□ -1.55
DSG3-201ENST00000257189 A0A1W2PNM2 257 aa5.34□□□□□ -1.55
DSG3-201ENST00000257189 LINC00304Q8N9R0 145 aa5.34□□□□□ -1.55
DSG3-201ENST00000257189 Q8N9P0 234 aaPredicted RBP5.34□□□□□ -1.55
DSG3-201ENST00000257189 LINC00588Q9Y4M8 146 aa5.34□□□□□ -1.55
DSG3-201ENST00000257189 KRTAP1-1Q07627 177 aa5.34□□□□□ -1.55
DSG3-201ENST00000257189 STAB1Q9NY15 2570 aa5.34□□□□□ -1.56
DSG3-201ENST00000257189 IGLV5-37A0A075B6J1 123 aa5.32□□□□□ -1.56
DSG3-201ENST00000257189 SPRR4Q96PI1 79 aa5.32□□□□□ -1.56
DSG3-201ENST00000257189 CENPEQ02224 2701 aa5.32□□□□□ -1.56
DSG3-201ENST00000257189 CPAMD8Q8IZJ3 1885 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms