RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 PCSK5Q92824 1860 aa9.03□□□□□ -0.96
PCDHGA3-201ENST00000253812 CFAP54Q96N23 3096 aa9.03□□□□□ -0.96
PCDHGA3-201ENST00000253812 LINC00167Q96N53 147 aa9.03□□□□□ -0.96
PCDHGA3-201ENST00000253812 MOBPQ13875 183 aa9.03□□□□□ -0.96
PCDHGA3-201ENST00000253812 Q6ZRX8 168 aa9.02□□□□□ -0.97
PCDHGA3-201ENST00000253812 CELSR3Q9NYQ7 3312 aa9.02□□□□□ -0.97
PCDHGA3-201ENST00000253812 FRYLO94915 3013 aa9.01□□□□□ -0.97
PCDHGA3-201ENST00000253812 M0R2N4 97 aa9.01□□□□□ -0.97
PCDHGA3-201ENST00000253812 TET2Q6N021 2002 aaPredicted RBP9.01□□□□□ -0.97
PCDHGA3-201ENST00000253812 K7EQZ3 153 aa9.01□□□□□ -0.97
PCDHGA3-201ENST00000253812 PTPRBP23467 1997 aa9□□□□□ -0.97
PCDHGA3-201ENST00000253812 CDC42SE1Q9NRR8 79 aa8.99□□□□□ -0.97
PCDHGA3-201ENST00000253812 A8MWP4 228 aa8.98□□□□□ -0.97
PCDHGA3-201ENST00000253812 RPL37AP61513 92 aaKnown RBP8.97□□□□□ -0.97
PCDHGA3-201ENST00000253812 CRIPTQ9P021 101 aa8.96□□□□□ -0.98
PCDHGA3-201ENST00000253812 HELZ2Q9BYK8 2649 aaKnown RBP8.96□□□□□ -0.98
PCDHGA3-201ENST00000253812 CENPEQ02224 2701 aa8.96□□□□□ -0.98
PCDHGA3-201ENST00000253812 IGLV6-57P01721 117 aa8.95□□□□□ -0.98
PCDHGA3-201ENST00000253812 RBM12B-AS1Q9P1G2 102 aa8.95□□□□□ -0.98
PCDHGA3-201ENST00000253812 WDFY4Q6ZS81 3184 aa8.95□□□□□ -0.98
PCDHGA3-201ENST00000253812 COL6A3P12111 3177 aa8.94□□□□□ -0.98
PCDHGA3-201ENST00000253812 FAM229AH3BQW9 127 aa8.94□□□□□ -0.98
PCDHGA3-201ENST00000253812 C16orf95Q9H693 158 aa8.94□□□□□ -0.98
PCDHGA3-201ENST00000253812 H3BS24 57 aa8.93□□□□□ -0.98
PCDHGA3-201ENST00000253812 Q1T7F1 81 aa8.93□□□□□ -0.98
PCDHGA3-201ENST00000253812 ST20-AS1Q8NBB2 130 aa8.92□□□□□ -0.98
PCDHGA3-201ENST00000253812 EIF4EBP3O60516 100 aaPredicted RBP8.92□□□□□ -0.98
PCDHGA3-201ENST00000253812 SPANXA2-OT1Q8N9U9 137 aa8.92□□□□□ -0.98
PCDHGA3-201ENST00000253812 MRPL34Q9BQ48 92 aaKnown RBP8.92□□□□□ -0.98
PCDHGA3-201ENST00000253812 GVQW2A0A096LPI5 108 aaPredicted RBP8.91□□□□□ -0.98
PCDHGA3-201ENST00000253812 LINC00313P59037 77 aa8.9□□□□□ -0.98
PCDHGA3-201ENST00000253812 PLA2G1BP04054 148 aaKnown RBP8.89□□□□□ -0.99
PCDHGA3-201ENST00000253812 IGLV5-52A0A0A0MRZ9 124 aa8.88□□□□□ -0.99
PCDHGA3-201ENST00000253812 FREM2Q5SZK8 3169 aa8.88□□□□□ -0.99
PCDHGA3-201ENST00000253812 EPM2AB3EWF7 344 aa8.86□□□□□ -0.99
PCDHGA3-201ENST00000253812 LINC00528Q8N1L1 170 aa8.86□□□□□ -0.99
PCDHGA3-201ENST00000253812 LINC01554Q52M75 96 aa8.85□□□□□ -0.99
PCDHGA3-201ENST00000253812 Q5XG85 94 aa8.85□□□□□ -0.99
PCDHGA3-201ENST00000253812 SPACA4Q8TDM5 124 aa8.85□□□□□ -0.99
PCDHGA3-201ENST00000253812 NUPR2A6NF83 97 aa8.85□□□□□ -0.99
PCDHGA3-201ENST00000253812 ZNF292O60281 2723 aa8.83□□□□□ -1
PCDHGA3-201ENST00000253812 Q6ZRP5 223 aa8.82□□□□□ -1
PCDHGA3-201ENST00000253812 MGAQ8IWI9 3026 aa8.82□□□□□ -1
PCDHGA3-201ENST00000253812 FRYQ5TBA9 3013 aa8.81□□□□□ -1
PCDHGA3-201ENST00000253812 COL27A1Q8IZC6 1860 aaPredicted RBP8.81□□□□□ -1
PCDHGA3-201ENST00000253812 KCNQ1DNQ9H478 68 aa8.81□□□□□ -1
PCDHGA3-201ENST00000253812 C8orf17Q9NRJ1 99 aa8.8□□□□□ -1
PCDHGA3-201ENST00000253812 C9orf129Q5T035 196 aaKnown RBP8.79□□□□□ -1
PCDHGA3-201ENST00000253812 STAB1Q9NY15 2570 aa8.79□□□□□ -1
PCDHGA3-201ENST00000253812 CFAP46Q8IYW2 2715 aa8.78□□□□□ -1
PCDHGA3-201ENST00000253812 H3BNG1 76 aa8.78□□□□□ -1
PCDHGA3-201ENST00000253812 WDFY3Q8IZQ1 3526 aa8.78□□□□□ -1
PCDHGA3-201ENST00000253812 IGFL1Q6UW32 110 aa8.77□□□□□ -1
PCDHGA3-201ENST00000253812 MUC3AQ02505 3323 aa8.77□□□□□ -1.01
PCDHGA3-201ENST00000253812 FLNAP21333 2647 aaKnown RBP8.77□□□□□ -1.01
PCDHGA3-201ENST00000253812 OCR1Q9BZK8 76 aa8.77□□□□□ -1.01
PCDHGA3-201ENST00000253812 OBSCN-AS1Q96MR7 158 aa8.76□□□□□ -1.01
PCDHGA3-201ENST00000253812 TEP1Q99973 2627 aaKnown RBP8.76□□□□□ -1.01
PCDHGA3-201ENST00000253812 Q8N377 158 aa8.76□□□□□ -1.01
PCDHGA3-201ENST00000253812 Q75L30 129 aa8.75□□□□□ -1.01
PCDHGA3-201ENST00000253812 C16orf90A8MZG2 172 aa8.75□□□□□ -1.01
PCDHGA3-201ENST00000253812 PHF5AQ7RTV0 110 aaKnown RBP8.75□□□□□ -1.01
PCDHGA3-201ENST00000253812 FP248Q71RG6 208 aaPredicted RBP8.74□□□□□ -1.01
PCDHGA3-201ENST00000253812 APLNQ9ULZ1 77 aa8.74□□□□□ -1.01
PCDHGA3-201ENST00000253812 ITPR3Q14573 2671 aa8.74□□□□□ -1.01
PCDHGA3-201ENST00000253812 LUZP6Q538Z0 58 aa8.74□□□□□ -1.01
PCDHGA3-201ENST00000253812 DSPP15924 2871 aaKnown RBP8.74□□□□□ -1.01
PCDHGA3-201ENST00000253812 DMDP11532 3685 aa8.73□□□□□ -1.01
PCDHGA3-201ENST00000253812 TNRC18O15417 2968 aaPredicted RBP8.73□□□□□ -1.01
PCDHGA3-201ENST00000253812 IGLV1-50A0A075B6I6 118 aa8.72□□□□□ -1.01
PCDHGA3-201ENST00000253812 A0A1B0GVX0 72 aa8.72□□□□□ -1.01
PCDHGA3-201ENST00000253812 NBEAQ8NFP9 2946 aa8.72□□□□□ -1.01
PCDHGA3-201ENST00000253812 KLK9Q2XQG4 91 aa8.72□□□□□ -1.01
PCDHGA3-201ENST00000253812 KRTAP24-1Q3LI83 254 aa8.71□□□□□ -1.02
PCDHGA3-201ENST00000253812 C1orf134Q5TEV5 83 aa8.7□□□□□ -1.02
PCDHGA3-201ENST00000253812 Q96NJ1 140 aa8.69□□□□□ -1.02
PCDHGA3-201ENST00000253812 FAM104AQ969W3 186 aa8.69□□□□□ -1.02
PCDHGA3-201ENST00000253812 A0A1W2PNM2 257 aa8.67□□□□□ -1.02
PCDHGA3-201ENST00000253812 NOTCH1P46531 2555 aa8.67□□□□□ -1.02
PCDHGA3-201ENST00000253812 PRR26Q8N8Z3 221 aa8.66□□□□□ -1.02
PCDHGA3-201ENST00000253812 BOD1L1Q8NFC6 3051 aa8.66□□□□□ -1.02
PCDHGA3-201ENST00000253812 Q8N9P0 234 aaPredicted RBP8.66□□□□□ -1.02
PCDHGA3-201ENST00000253812 LOC400499M0QZD8 3231 aa8.65□□□□□ -1.02
PCDHGA3-201ENST00000253812 A0A096LNT2 108 aa8.65□□□□□ -1.03
PCDHGA3-201ENST00000253812 C9orf163Q8N9P6 203 aa8.65□□□□□ -1.03
PCDHGA3-201ENST00000253812 IGLV7-46A0A075B6I9 117 aa8.63□□□□□ -1.03
PCDHGA3-201ENST00000253812 FAM168BA1KXE4 195 aa8.63□□□□□ -1.03
PCDHGA3-201ENST00000253812 PRAC1Q96KF2 57 aa8.63□□□□□ -1.03
PCDHGA3-201ENST00000253812 CYSTM1Q9H1C7 97 aa8.62□□□□□ -1.03
PCDHGA3-201ENST00000253812 LINC01558Q9Y6Z2 57 aa8.62□□□□□ -1.03
PCDHGA3-201ENST00000253812 FAM229BQ4G0N7 80 aa8.62□□□□□ -1.03
PCDHGA3-201ENST00000253812 IGLV5-48A0A075B6I7 105 aa8.62□□□□□ -1.03
PCDHGA3-201ENST00000253812 BAHCC1Q9P281 2608 aa8.61□□□□□ -1.03
PCDHGA3-201ENST00000253812 MAP1AP78559 2803 aaPredicted RBP8.61□□□□□ -1.03
PCDHGA3-201ENST00000253812 TYMSOSQ8TAI1 123 aa8.61□□□□□ -1.03
PCDHGA3-201ENST00000253812 LINC00588Q9Y4M8 146 aa8.61□□□□□ -1.03
PCDHGA3-201ENST00000253812 DSCR10P59022 87 aa8.6□□□□□ -1.03
PCDHGA3-201ENST00000253812 CHTF8P0CG12 524 aa8.6□□□□□ -1.03
PCDHGA3-201ENST00000253812 WWC2-AS2Q96NR7 200 aa8.59□□□□□ -1.03
PCDHGA3-201ENST00000253812 PRR34Q9NV39 138 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms