RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 IGLV6-57P01721 117 aa11.32□□□□□ -0.6
ACTN4-201ENST00000252699 FAM168BA1KXE4 195 aa11.31□□□□□ -0.6
ACTN4-201ENST00000252699 ITPR2Q14571 2701 aa11.31□□□□□ -0.6
ACTN4-201ENST00000252699 LINC01547P58512 204 aaPredicted RBP11.31□□□□□ -0.6
ACTN4-201ENST00000252699 IGHV6-1A0A0B4J1U7 121 aa11.3□□□□□ -0.6
ACTN4-201ENST00000252699 SERTAD4-AS1Q5TG53 156 aa11.3□□□□□ -0.6
ACTN4-201ENST00000252699 CASC2Q6XLA1 102 aa11.29□□□□□ -0.6
ACTN4-201ENST00000252699 WIPF1O43516 503 aa11.29□□□□□ -0.6
ACTN4-201ENST00000252699 KALRNO60229 2985 aa11.29□□□□□ -0.6
ACTN4-201ENST00000252699 TRAV7A0A075B6U4 112 aa11.29□□□□□ -0.6
ACTN4-201ENST00000252699 NDUFC1O43677 76 aa11.29□□□□□ -0.6
ACTN4-201ENST00000252699 EPM2AB3EWF7 344 aa11.28□□□□□ -0.6
ACTN4-201ENST00000252699 ST20-AS1Q8NBB2 130 aa11.28□□□□□ -0.6
ACTN4-201ENST00000252699 PRR4Q16378 134 aa11.27□□□□□ -0.61
ACTN4-201ENST00000252699 NBEAL2Q6ZNJ1 2754 aa11.26□□□□□ -0.61
ACTN4-201ENST00000252699 Q8N9L7 120 aa11.25□□□□□ -0.61
ACTN4-201ENST00000252699 LRBAP50851 2863 aa11.25□□□□□ -0.61
ACTN4-201ENST00000252699 MOBPQ13875 183 aa11.25□□□□□ -0.61
ACTN4-201ENST00000252699 LINC00208Q96KT6 92 aa11.23□□□□□ -0.61
ACTN4-201ENST00000252699 CXCL6P80162 114 aa11.22□□□□□ -0.61
ACTN4-201ENST00000252699 Q6ZQT0 140 aa11.21□□□□□ -0.61
ACTN4-201ENST00000252699 LINC00476Q8WZB0 136 aa11.21□□□□□ -0.61
ACTN4-201ENST00000252699 APLNQ9ULZ1 77 aa11.21□□□□□ -0.61
ACTN4-201ENST00000252699 NBEAL1Q6ZS30 2694 aa11.21□□□□□ -0.61
ACTN4-201ENST00000252699 TRBV7-7A0A0K0K1E9 115 aa11.21□□□□□ -0.61
ACTN4-201ENST00000252699 KCNQ1DNQ9H478 68 aa11.21□□□□□ -0.61
ACTN4-201ENST00000252699 IGLV1-50A0A075B6I6 118 aa11.21□□□□□ -0.62
ACTN4-201ENST00000252699 BCE1O60756 84 aa11.21□□□□□ -0.62
ACTN4-201ENST00000252699 CASC10Q5T4H9 136 aa11.2□□□□□ -0.62
ACTN4-201ENST00000252699 Q8NBF4 154 aa11.2□□□□□ -0.62
ACTN4-201ENST00000252699 UTP20O75691 2785 aaKnown RBP11.2□□□□□ -0.62
ACTN4-201ENST00000252699 C9orf129Q5T035 196 aaKnown RBP11.19□□□□□ -0.62
ACTN4-201ENST00000252699 LOC110117498A0A087WWA1 95 aa11.18□□□□□ -0.62
ACTN4-201ENST00000252699 LINC00528Q8N1L1 170 aa11.18□□□□□ -0.62
ACTN4-201ENST00000252699 HCG22E2RYF7 251 aa11.17□□□□□ -0.62
ACTN4-201ENST00000252699 C9orf163Q8N9P6 203 aa11.16□□□□□ -0.62
ACTN4-201ENST00000252699 A0A087WTM6 91 aa11.16□□□□□ -0.62
ACTN4-201ENST00000252699 ATP5EP56381 51 aaPredicted RBP11.16□□□□□ -0.62
ACTN4-201ENST00000252699 MPLKIPQ8TAP9 179 aa11.16□□□□□ -0.62
ACTN4-201ENST00000252699 LIMD2Q9BT23 127 aa11.16□□□□□ -0.62
ACTN4-201ENST00000252699 FAM104AQ969W3 186 aa11.15□□□□□ -0.62
ACTN4-201ENST00000252699 NSD1Q96L73 2696 aaPredicted RBP11.15□□□□□ -0.62
ACTN4-201ENST00000252699 A0A1B0GW54 56 aa11.15□□□□□ -0.62
ACTN4-201ENST00000252699 SEC61GP60059 68 aa11.15□□□□□ -0.63
ACTN4-201ENST00000252699 TLX1NBP0CAT3 122 aa11.14□□□□□ -0.63
ACTN4-201ENST00000252699 LOC400499M0QZD8 3231 aa11.12□□□□□ -0.63
ACTN4-201ENST00000252699 CRYGAP11844 174 aa11.11□□□□□ -0.63
ACTN4-201ENST00000252699 SPACA4Q8TDM5 124 aa11.11□□□□□ -0.63
ACTN4-201ENST00000252699 CFAP47Q6ZTR5 3102 aa11.11□□□□□ -0.63
ACTN4-201ENST00000252699 HIVEP1P15822 2718 aa11.11□□□□□ -0.63
ACTN4-201ENST00000252699 RETNLBQ9BQ08 111 aa11.09□□□□□ -0.63
ACTN4-201ENST00000252699 APCP25054 2843 aa11.09□□□□□ -0.63
ACTN4-201ENST00000252699 TMEM254Q8TBM7 123 aa11.09□□□□□ -0.63
ACTN4-201ENST00000252699 USP34Q70CQ2 3546 aa11.08□□□□□ -0.64
ACTN4-201ENST00000252699 H0Y9P7 68 aa11.08□□□□□ -0.64
ACTN4-201ENST00000252699 PLA2G2DQ9UNK4 145 aa11.07□□□□□ -0.64
ACTN4-201ENST00000252699 SMIM29Q86T20 159 aa11.07□□□□□ -0.64
ACTN4-201ENST00000252699 ZANQ9Y493 2812 aa11.07□□□□□ -0.64
ACTN4-201ENST00000252699 FAM229AH3BQW9 127 aa11.06□□□□□ -0.64
ACTN4-201ENST00000252699 CNBPP62633 177 aaKnown RBP11.06□□□□□ -0.64
ACTN4-201ENST00000252699 PCOTHQ58A44 107 aa11.06□□□□□ -0.64
ACTN4-201ENST00000252699 A0A1W2PNN7 141 aa11.05□□□□□ -0.64
ACTN4-201ENST00000252699 TRBV7-4A0A0J9YYF1 115 aa11.04□□□□□ -0.64
ACTN4-201ENST00000252699 TYMSOSQ8TAI1 123 aa11.03□□□□□ -0.64
ACTN4-201ENST00000252699 Q8N377 158 aa11.02□□□□□ -0.64
ACTN4-201ENST00000252699 BRK1Q8WUW1 75 aa11□□□□□ -0.65
ACTN4-201ENST00000252699 hDV103S1A0JD37 113 aa11□□□□□ -0.65
ACTN4-201ENST00000252699 ZNF861PO60384 105 aa10.98□□□□□ -0.65
ACTN4-201ENST00000252699 RPL37AP61513 92 aaKnown RBP10.97□□□□□ -0.65
ACTN4-201ENST00000252699 PLA2G1BP04054 148 aaKnown RBP10.97□□□□□ -0.65
ACTN4-201ENST00000252699 V9GYY9 64 aa10.97□□□□□ -0.65
ACTN4-201ENST00000252699 C1orf64Q8NEQ6 169 aa10.97□□□□□ -0.65
ACTN4-201ENST00000252699 IGFL1Q6UW32 110 aa10.96□□□□□ -0.66
ACTN4-201ENST00000252699 MYO15AQ9UKN7 3530 aa10.96□□□□□ -0.66
ACTN4-201ENST00000252699 ERC2-IT1O76042 136 aa10.95□□□□□ -0.66
ACTN4-201ENST00000252699 SERP1Q9Y6X1 66 aa10.93□□□□□ -0.66
ACTN4-201ENST00000252699 SMIM26A0A096LP01 95 aa10.93□□□□□ -0.66
ACTN4-201ENST00000252699 PSORS1C2Q9UIG4 136 aa10.93□□□□□ -0.66
ACTN4-201ENST00000252699 A0A0G2JQZ4 141 aa10.92□□□□□ -0.66
ACTN4-201ENST00000252699 TP53AIP1Q9HCN2 124 aa10.92□□□□□ -0.66
ACTN4-201ENST00000252699 IGKV2D-30A0A075B6S6 120 aa10.92□□□□□ -0.66
ACTN4-201ENST00000252699 IGKV2-30P06310 120 aa10.92□□□□□ -0.66
ACTN4-201ENST00000252699 IGLV5-37A0A075B6J1 123 aa10.9□□□□□ -0.66
ACTN4-201ENST00000252699 PRR15LQ9BU68 103 aa10.9□□□□□ -0.66
ACTN4-201ENST00000252699 TNP2Q05952 138 aa10.9□□□□□ -0.66
ACTN4-201ENST00000252699 SPTSSBQ8NFR3 76 aa10.9□□□□□ -0.66
ACTN4-201ENST00000252699 K7EQZ3 153 aa10.88□□□□□ -0.67
ACTN4-201ENST00000252699 SMR3BP02814 79 aaPredicted RBP10.88□□□□□ -0.67
ACTN4-201ENST00000252699 ANAPC11Q9NYG5 84 aa10.88□□□□□ -0.67
ACTN4-201ENST00000252699 HRNRQ86YZ3 2850 aaPredicted RBP10.87□□□□□ -0.67
ACTN4-201ENST00000252699 LINC00313P59037 77 aa10.87□□□□□ -0.67
ACTN4-201ENST00000252699 A8MWP4 228 aa10.87□□□□□ -0.67
ACTN4-201ENST00000252699 IGLV7-43P04211 117 aa10.86□□□□□ -0.67
ACTN4-201ENST00000252699 NIPBLQ6KC79 2804 aaeCLIP10.86□□□□□ -0.672e-6■■■■□ 25.1
ACTN4-201ENST00000252699 LINC00336Q6ZUF6 198 aa10.86□□□□□ -0.67
ACTN4-201ENST00000252699 SSBP3-AS1Q7Z2R9 100 aa10.86□□□□□ -0.67
ACTN4-201ENST00000252699 CELSR2Q9HCU4 2923 aa10.85□□□□□ -0.67
ACTN4-201ENST00000252699 ASH1LQ9NR48 2969 aaKnown RBP10.84□□□□□ -0.67
ACTN4-201ENST00000252699 A6NED7 52 aa10.83□□□□□ -0.68
ACTN4-201ENST00000252699 TRAV22A0A0B4J277 110 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms