RNA–Protein interactions for RNA: ENST00000236273.8

SYF2-201, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYF2, Length 1,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-201ENST00000236273 ETDCA0A1B0GVM5 59 aa13.17□□□□□ -0.3
SYF2-201ENST00000236273 SMCR5Q8TEV8 140 aa13.17□□□□□ -0.3
SYF2-201ENST00000236273 TRAV23DV6A0A075B6W5 121 aa13.16□□□□□ -0.3
SYF2-201ENST00000236273 RPL13AP40429 203 aaKnown RBP13.15□□□□□ -0.3
SYF2-201ENST00000236273 S100A12P80511 92 aa13.15□□□□□ -0.3
SYF2-201ENST00000236273 JOSD1Q15040 202 aaPredicted RBP13.15□□□□□ -0.3
SYF2-201ENST00000236273 KRTAP13-2Q52LG2 175 aa13.15□□□□□ -0.3
SYF2-201ENST00000236273 ZNF73O43830 326 aaPredicted RBP13.13□□□□□ -0.31
SYF2-201ENST00000236273 CRYGAP11844 174 aa13.13□□□□□ -0.31
SYF2-201ENST00000236273 FAM229BQ4G0N7 80 aa13.13□□□□□ -0.31
SYF2-201ENST00000236273 LINC00518Q8N0U6 118 aa13.13□□□□□ -0.31
SYF2-201ENST00000236273 Q9BRP9 147 aa13.13□□□□□ -0.31
SYF2-201ENST00000236273 Q6ZRX8 168 aa13.13□□□□□ -0.31
SYF2-201ENST00000236273 SPRR4Q96PI1 79 aa13.13□□□□□ -0.31
SYF2-201ENST00000236273 ERC2-IT1O76042 136 aa13.12□□□□□ -0.31
SYF2-201ENST00000236273 COX8AP10176 69 aa13.12□□□□□ -0.31
SYF2-201ENST00000236273 OR13C6PQ8NH95 151 aa13.12□□□□□ -0.31
SYF2-201ENST00000236273 COPS9Q8WXC6 57 aa13.11□□□□□ -0.31
SYF2-201ENST00000236273 TMA7Q9Y2S6 64 aaKnown RBP13.11□□□□□ -0.31
SYF2-201ENST00000236273 DLEU1O43261 78 aa13.08□□□□□ -0.32
SYF2-201ENST00000236273 TYMSOSQ8TAI1 123 aa13.07□□□□□ -0.32
SYF2-201ENST00000236273 PAM16Q9Y3D7 125 aa13.07□□□□□ -0.32
SYF2-201ENST00000236273 PYY3Q5JQD4 70 aa13.06□□□□□ -0.32
SYF2-201ENST00000236273 C14orf144Q96I85 54 aa13.06□□□□□ -0.32
SYF2-201ENST00000236273 SPATA45Q537H7 98 aa13.05□□□□□ -0.32
SYF2-201ENST00000236273 CBY1Q9Y3M2 126 aa13.05□□□□□ -0.32
SYF2-201ENST00000236273 LINC00483Q53H64 154 aa13.03□□□□□ -0.32
SYF2-201ENST00000236273 C3orf22Q8N5N4 141 aa13.03□□□□□ -0.32
SYF2-201ENST00000236273 ZNF706Q9Y5V0 76 aaPredicted RBP13.03□□□□□ -0.32
SYF2-201ENST00000236273 VAMP8Q9BV40 100 aa13.02□□□□□ -0.33
SYF2-201ENST00000236273 C6orf99Q4VX62 202 aa13.01□□□□□ -0.33
SYF2-201ENST00000236273 A4D1N5 150 aa13□□□□□ -0.33
SYF2-201ENST00000236273 A6NDN8 102 aa13□□□□□ -0.33
SYF2-201ENST00000236273 TRAV13-2A0A0B4J235 113 aa12.98□□□□□ -0.33
SYF2-201ENST00000236273 HINT1P49773 126 aaPredicted RBP12.98□□□□□ -0.33
SYF2-201ENST00000236273 ELOF1P60002 83 aaKnown RBP12.98□□□□□ -0.33
SYF2-201ENST00000236273 GAGE2AQ6NT46 116 aa12.98□□□□□ -0.33
SYF2-201ENST00000236273 C2orf91Q6ZV80 131 aa12.98□□□□□ -0.33
SYF2-201ENST00000236273 LRP2P98164 4655 aa12.97□□□□□ -0.33
SYF2-201ENST00000236273 ST20-AS1Q8NBB2 130 aa12.97□□□□□ -0.33
SYF2-201ENST00000236273 HIST1H4GQ99525 98 aa12.96□□□□□ -0.33
SYF2-201ENST00000236273 HIGD1BQ9P298 99 aa12.96□□□□□ -0.33
SYF2-201ENST00000236273 TRBV7-6A0A0J9YX20 115 aa12.95□□□□□ -0.34
SYF2-201ENST00000236273 COX7BP24311 80 aa12.95□□□□□ -0.34
SYF2-201ENST00000236273 SLC25A34Q6PIV7 304 aa12.95□□□□□ -0.34
SYF2-201ENST00000236273 UBR4Q5T4S7 5183 aa12.94□□□□□ -0.34
SYF2-201ENST00000236273 SMIM11BQ8TCY0 68 aa12.94□□□□□ -0.34
SYF2-201ENST00000236273 TSPAN13O95857 204 aa12.92□□□□□ -0.34
SYF2-201ENST00000236273 DHRS4-AS1Q9P1J3 65 aa12.92□□□□□ -0.34
SYF2-201ENST00000236273 LINC00304Q8N9R0 145 aa12.91□□□□□ -0.34
SYF2-201ENST00000236273 LPAP08519 4548 aa12.91□□□□□ -0.34
SYF2-201ENST00000236273 A0A1B0GWB2 263 aa12.89□□□□□ -0.35
SYF2-201ENST00000236273 C12orf57Q99622 126 aa12.88□□□□□ -0.35
SYF2-201ENST00000236273 SPRR1BP22528 89 aa12.88□□□□□ -0.35
SYF2-201ENST00000236273 CFC1BP0CG36 223 aa12.86□□□□□ -0.35
SYF2-201ENST00000236273 CFC1P0CG37 223 aa12.86□□□□□ -0.35
SYF2-201ENST00000236273 Q8NBF4 154 aa12.85□□□□□ -0.35
SYF2-201ENST00000236273 IGLV9-49A0A0B4J1Y8 123 aa12.84□□□□□ -0.35
SYF2-201ENST00000236273 LINC01547P58512 204 aaPredicted RBP12.83□□□□□ -0.36
SYF2-201ENST00000236273 TAL2Q16559 108 aa12.83□□□□□ -0.36
SYF2-201ENST00000236273 CTAG1AP78358 180 aa12.82□□□□□ -0.36
SYF2-201ENST00000236273 MOBPQ13875 183 aa12.82□□□□□ -0.36
SYF2-201ENST00000236273 CEND1Q8N111 149 aa12.82□□□□□ -0.36
SYF2-201ENST00000236273 SSBP3-AS1Q7Z2R9 100 aa12.81□□□□□ -0.36
SYF2-201ENST00000236273 SPAG11AQ6PDA7 123 aa12.8□□□□□ -0.36
SYF2-201ENST00000236273 IGLV5-48A0A075B6I7 105 aa12.77□□□□□ -0.37
SYF2-201ENST00000236273 A0A0B4J2C4 111 aa12.77□□□□□ -0.37
SYF2-201ENST00000236273 FXYD2P54710 66 aa12.77□□□□□ -0.37
SYF2-201ENST00000236273 LINC00575Q6W349 94 aa12.77□□□□□ -0.37
SYF2-201ENST00000236273 VAMP3Q15836 100 aa12.76□□□□□ -0.37
SYF2-201ENST00000236273 PRR4Q16378 134 aa12.76□□□□□ -0.37
SYF2-201ENST00000236273 SMIM29Q86T20 159 aa12.76□□□□□ -0.37
SYF2-201ENST00000236273 DEFB105AQ8NG35 78 aa12.76□□□□□ -0.37
SYF2-201ENST00000236273 TEX49A0A1B0GTD5 131 aa12.75□□□□□ -0.37
SYF2-201ENST00000236273 RETNLBQ9BQ08 111 aa12.75□□□□□ -0.37
SYF2-201ENST00000236273 RAB37Q96AX2 223 aa12.73□□□□□ -0.37
SYF2-201ENST00000236273 C4orf48Q5BLP8 95 aa12.72□□□□□ -0.37
SYF2-201ENST00000236273 C9orf153Q5TBE3 101 aa12.72□□□□□ -0.37
SYF2-201ENST00000236273 Q8N377 158 aa12.72□□□□□ -0.37
SYF2-201ENST00000236273 NHP2Q9NX24 153 aaKnown RBP12.72□□□□□ -0.37
SYF2-201ENST00000236273 UQCR10Q9UDW1 63 aa12.72□□□□□ -0.37
SYF2-201ENST00000236273 H7C2G1 150 aa12.71□□□□□ -0.37
SYF2-201ENST00000236273 SPINK1P00995 79 aa12.71□□□□□ -0.37
SYF2-201ENST00000236273 LAMTOR3Q9UHA4 124 aa12.71□□□□□ -0.37
SYF2-201ENST00000236273 HSD52Q0P140 79 aa12.7□□□□□ -0.38
SYF2-201ENST00000236273 hADV29S1A0JD25 119 aa12.69□□□□□ -0.38
SYF2-201ENST00000236273 Q1RN00 199 aa12.69□□□□□ -0.38
SYF2-201ENST00000236273 BVES-AS1Q5T3Y7 98 aa12.69□□□□□ -0.38
SYF2-201ENST00000236273 TMEM238LA0A1B0GVL6 79 aa12.67□□□□□ -0.38
SYF2-201ENST00000236273 A6NJY4 79 aa12.67□□□□□ -0.38
SYF2-201ENST00000236273 SLC25A20O43772 301 aa12.67□□□□□ -0.38
SYF2-201ENST00000236273 PRO1854Q9UHT4 67 aa12.67□□□□□ -0.38
SYF2-201ENST00000236273 RPS29P62273 56 aaKnown RBP12.65□□□□□ -0.38
SYF2-201ENST00000236273 Q6ZQY7 126 aa12.65□□□□□ -0.38
SYF2-201ENST00000236273 FAM218AQ96MZ4 157 aa12.62□□□□□ -0.39
SYF2-201ENST00000236273 PRO1933Q9H354 126 aa12.62□□□□□ -0.39
SYF2-201ENST00000236273 RNF213Q63HN8 5207 aa12.62□□□□□ -0.39
SYF2-201ENST00000236273 LOC105371267A0A1B0GV96 52 aa12.61□□□□□ -0.39
SYF2-201ENST00000236273 H0YGX0 51 aa12.6□□□□□ -0.39
SYF2-201ENST00000236273 K7ERJ3 54 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms