RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 SPRR1AP35321 89 aa6.21□□□□□ -1.42
HMGCL-201ENST00000235958 CBY1Q9Y3M2 126 aa6.21□□□□□ -1.42
HMGCL-201ENST00000235958 TRAV23DV6A0A075B6W5 121 aa6.2□□□□□ -1.42
HMGCL-201ENST00000235958 TMEM238LA0A1B0GVL6 79 aa6.2□□□□□ -1.42
HMGCL-201ENST00000235958 A6NJY4 79 aa6.2□□□□□ -1.42
HMGCL-201ENST00000235958 KRTAP4-16G5E9R7 235 aaPredicted RBP6.2□□□□□ -1.42
HMGCL-201ENST00000235958 ZNF861PO60384 105 aa6.2□□□□□ -1.42
HMGCL-201ENST00000235958 BVES-AS1Q5T3Y7 98 aa6.2□□□□□ -1.42
HMGCL-201ENST00000235958 FAM19A1Q7Z5A9 133 aa6.2□□□□□ -1.42
HMGCL-201ENST00000235958 ETDCA0A1B0GVM5 59 aa6.19□□□□□ -1.42
HMGCL-201ENST00000235958 ZNF73O43830 326 aaPredicted RBP6.19□□□□□ -1.42
HMGCL-201ENST00000235958 RPL28P46779 137 aaKnown RBP6.19□□□□□ -1.42
HMGCL-201ENST00000235958 UBE2AP49459 152 aa6.19□□□□□ -1.42
HMGCL-201ENST00000235958 SPINK6Q6UWN8 80 aa6.19□□□□□ -1.42
HMGCL-201ENST00000235958 SMIM11BQ8TCY0 68 aa6.19□□□□□ -1.42
HMGCL-201ENST00000235958 RAB37Q96AX2 223 aa6.19□□□□□ -1.42
HMGCL-201ENST00000235958 FLG2Q5D862 2391 aaPredicted RBP6.18□□□□□ -1.42
HMGCL-201ENST00000235958 A0A0B4J2C4 111 aa6.18□□□□□ -1.42
HMGCL-201ENST00000235958 B5MCH6 92 aa6.18□□□□□ -1.42
HMGCL-201ENST00000235958 INAFM2P0DMQ5 153 aa6.18□□□□□ -1.42
HMGCL-201ENST00000235958 HINT1P49773 126 aaPredicted RBP6.18□□□□□ -1.42
HMGCL-201ENST00000235958 PRLHP81277 87 aa6.18□□□□□ -1.42
HMGCL-201ENST00000235958 KRTAP13-1Q8IUC0 172 aa6.18□□□□□ -1.42
HMGCL-201ENST00000235958 PRO1854Q9UHT4 67 aa6.18□□□□□ -1.42
HMGCL-201ENST00000235958 H0Y9J4 135 aa6.17□□□□□ -1.42
HMGCL-201ENST00000235958 RPL13AP40429 203 aaKnown RBP6.17□□□□□ -1.42
HMGCL-201ENST00000235958 C6orf99Q4VX62 202 aa6.17□□□□□ -1.42
HMGCL-201ENST00000235958 DIRC1Q969H9 104 aa6.17□□□□□ -1.42
HMGCL-201ENST00000235958 NHP2Q9NX24 153 aaKnown RBP6.17□□□□□ -1.42
HMGCL-201ENST00000235958 H7C2G1 150 aa6.16□□□□□ -1.42
HMGCL-201ENST00000235958 LCE2DQ5TA82 110 aaPredicted RBP6.16□□□□□ -1.42
HMGCL-201ENST00000235958 ABCA13Q86UQ4 5058 aa6.15□□□□□ -1.42
HMGCL-201ENST00000235958 TRBV7-6A0A0J9YX20 115 aa6.15□□□□□ -1.42
HMGCL-201ENST00000235958 A0A1B0GWB2 263 aa6.15□□□□□ -1.42
HMGCL-201ENST00000235958 M0R143 59 aa6.15□□□□□ -1.42
HMGCL-201ENST00000235958 Q6ZRX8 168 aa6.15□□□□□ -1.42
HMGCL-201ENST00000235958 HIGD2AQ9BW72 106 aa6.15□□□□□ -1.42
HMGCL-201ENST00000235958 K7ERJ3 54 aa6.14□□□□□ -1.43
HMGCL-201ENST00000235958 COX7BP24311 80 aa6.14□□□□□ -1.43
HMGCL-201ENST00000235958 VAMP3Q15836 100 aa6.14□□□□□ -1.43
HMGCL-201ENST00000235958 SMCR5Q8TEV8 140 aa6.14□□□□□ -1.43
HMGCL-201ENST00000235958 Q9BRP9 147 aa6.14□□□□□ -1.43
HMGCL-201ENST00000235958 ERC2-IT1O76042 136 aa6.12□□□□□ -1.43
HMGCL-201ENST00000235958 ELOF1P60002 83 aaKnown RBP6.12□□□□□ -1.43
HMGCL-201ENST00000235958 Q1RN00 199 aa6.11□□□□□ -1.43
HMGCL-201ENST00000235958 DHRS4-AS1Q9P1J3 65 aa6.11□□□□□ -1.43
HMGCL-201ENST00000235958 PKHD1L1Q86WI1 4243 aa6.11□□□□□ -1.43
HMGCL-201ENST00000235958 PCP4L1A6NKN8 68 aa6.1□□□□□ -1.43
HMGCL-201ENST00000235958 BATFQ16520 125 aa6.1□□□□□ -1.43
HMGCL-201ENST00000235958 UBR4Q5T4S7 5183 aa6.1□□□□□ -1.43
HMGCL-201ENST00000235958 KRTAP1-4P0C5Y4 121 aa6.09□□□□□ -1.43
HMGCL-201ENST00000235958 LINC00575Q6W349 94 aa6.09□□□□□ -1.43
HMGCL-201ENST00000235958 ANAPC11Q9NYG5 84 aa6.09□□□□□ -1.43
HMGCL-201ENST00000235958 H0YGX0 51 aa6.08□□□□□ -1.44
HMGCL-201ENST00000235958 TRIAP1O43715 76 aa6.08□□□□□ -1.44
HMGCL-201ENST00000235958 TSPAN13O95857 204 aa6.08□□□□□ -1.44
HMGCL-201ENST00000235958 PSMB2P49721 201 aa6.08□□□□□ -1.44
HMGCL-201ENST00000235958 SLC25A20O43772 301 aa6.07□□□□□ -1.44
HMGCL-201ENST00000235958 OXTP01178 125 aa6.07□□□□□ -1.44
HMGCL-201ENST00000235958 ST20-AS1Q8NBB2 130 aa6.07□□□□□ -1.44
HMGCL-201ENST00000235958 LINC01600Q96MT4 127 aa6.07□□□□□ -1.44
HMGCL-201ENST00000235958 SPRR4Q96PI1 79 aa6.07□□□□□ -1.44
HMGCL-201ENST00000235958 hADV29S1A0JD25 119 aa6.06□□□□□ -1.44
HMGCL-201ENST00000235958 COX6CP09669 75 aa6.06□□□□□ -1.44
HMGCL-201ENST00000235958 GAGE2AQ6NT46 116 aa6.06□□□□□ -1.44
HMGCL-201ENST00000235958 SNHG12Q9BXW3 62 aa6.06□□□□□ -1.44
HMGCL-201ENST00000235958 ZNF706Q9Y5V0 76 aaPredicted RBP6.06□□□□□ -1.44
HMGCL-201ENST00000235958 KRTAP29-1A8MX34 341 aaPredicted RBP6.05□□□□□ -1.44
HMGCL-201ENST00000235958 SCGB1C2P0DMR2 95 aa6.05□□□□□ -1.44
HMGCL-201ENST00000235958 PRR26Q8N8Z3 221 aa6.05□□□□□ -1.44
HMGCL-201ENST00000235958 DEFB105AQ8NG35 78 aa6.05□□□□□ -1.44
HMGCL-201ENST00000235958 FAM218AQ96MZ4 157 aa6.05□□□□□ -1.44
HMGCL-201ENST00000235958 SNCGO76070 127 aa6.04□□□□□ -1.44
HMGCL-201ENST00000235958 KRTAP10-8P60410 259 aa6.04□□□□□ -1.44
HMGCL-201ENST00000235958 CLEC2BQ92478 149 aa6.04□□□□□ -1.44
HMGCL-201ENST00000235958 NAA38Q9BRA0 125 aaKnown RBP6.04□□□□□ -1.44
HMGCL-201ENST00000235958 DMBT1Q9UGM3 2413 aaPredicted RBP6.03□□□□□ -1.44
HMGCL-201ENST00000235958 A0A087X002 238 aa6.03□□□□□ -1.44
HMGCL-201ENST00000235958 CRYGAP11844 174 aa6.03□□□□□ -1.44
HMGCL-201ENST00000235958 FAM229BQ4G0N7 80 aa6.03□□□□□ -1.44
HMGCL-201ENST00000235958 LINC00483Q53H64 154 aa6.03□□□□□ -1.44
HMGCL-201ENST00000235958 LRP1Q07954 4544 aaKnown RBP6.02□□□□□ -1.45
HMGCL-201ENST00000235958 TAX1BP3O14907 124 aa6.02□□□□□ -1.45
HMGCL-201ENST00000235958 MT1HL1P0DM35 61 aa6.02□□□□□ -1.45
HMGCL-201ENST00000235958 Q6ZQY7 126 aa6.02□□□□□ -1.45
HMGCL-201ENST00000235958 TEX49A0A1B0GTD5 131 aa6.01□□□□□ -1.45
HMGCL-201ENST00000235958 A0A1B0GX51 115 aa6.01□□□□□ -1.45
HMGCL-201ENST00000235958 C9orf118A6NHY6 69 aa6.01□□□□□ -1.45
HMGCL-201ENST00000235958 H3BUT2 72 aa6.01□□□□□ -1.45
HMGCL-201ENST00000235958 SPRR1BP22528 89 aa6.01□□□□□ -1.45
HMGCL-201ENST00000235958 LINC01547P58512 204 aaPredicted RBP6.01□□□□□ -1.45
HMGCL-201ENST00000235958 KRTAP13-2Q52LG2 175 aa6.01□□□□□ -1.45
HMGCL-201ENST00000235958 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.01□□□□□ -1.45
HMGCL-201ENST00000235958 Q8N377 158 aa6.01□□□□□ -1.45
HMGCL-201ENST00000235958 IGLV5-48A0A075B6I7 105 aa6□□□□□ -1.45
HMGCL-201ENST00000235958 J3QL48 77 aa6□□□□□ -1.45
HMGCL-201ENST00000235958 COL5A1-AS1Q5SY13 56 aa6□□□□□ -1.45
HMGCL-201ENST00000235958 MYCBP2O75592 4640 aa5.99□□□□□ -1.45
HMGCL-201ENST00000235958 C3orf22Q8N5N4 141 aa5.99□□□□□ -1.45
HMGCL-201ENST00000235958 TYMSOSQ8TAI1 123 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms