RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 NOP10Q9NPE3 64 aaKnown RBP5.63□□□□□ -1.51
SPARC-201ENST00000231061 MGAM2Q2M2H8 2515 aa5.63□□□□□ -1.51
SPARC-201ENST00000231061 TRGV2A0A075B6R0 118 aa5.62□□□□□ -1.51
SPARC-201ENST00000231061 LINC00242Q5T6M2 205 aa5.62□□□□□ -1.51
SPARC-201ENST00000231061 MIR7-3HGQ8N6C7 128 aa5.62□□□□□ -1.51
SPARC-201ENST00000231061 LINC00308Q8TCZ7 52 aa5.61□□□□□ -1.51
SPARC-201ENST00000231061 B9D2Q9BPU9 175 aa5.61□□□□□ -1.51
SPARC-201ENST00000231061 COL6A5A8TX70 2615 aa5.61□□□□□ -1.51
SPARC-201ENST00000231061 FAM229AH3BQW9 127 aa5.61□□□□□ -1.51
SPARC-201ENST00000231061 TOMM7Q9P0U1 55 aa5.61□□□□□ -1.51
SPARC-201ENST00000231061 DNAJC9-AS1A6NH13 148 aa5.61□□□□□ -1.51
SPARC-201ENST00000231061 WFDC10AQ9H1F0 79 aa5.61□□□□□ -1.51
SPARC-201ENST00000231061 TRBV10-1A0A0K0K1A3 114 aa5.6□□□□□ -1.51
SPARC-201ENST00000231061 CR1P17927 2039 aa5.6□□□□□ -1.51
SPARC-201ENST00000231061 RPL37AP8A6NKH3 93 aa5.6□□□□□ -1.51
SPARC-201ENST00000231061 SMIM1B2RUZ4 78 aa5.6□□□□□ -1.51
SPARC-201ENST00000231061 MIR22HGQ0VDD5 57 aa5.6□□□□□ -1.51
SPARC-201ENST00000231061 IGLV5-45A0A087WSX0 123 aa5.6□□□□□ -1.51
SPARC-201ENST00000231061 RNASE1P07998 156 aaKnown RBP5.6□□□□□ -1.51
SPARC-201ENST00000231061 LUZP6Q538Z0 58 aa5.6□□□□□ -1.51
SPARC-201ENST00000231061 NTM-AS1Q6ZSK4 140 aa5.6□□□□□ -1.51
SPARC-201ENST00000231061 TRGV4A0A0C4DH28 118 aa5.59□□□□□ -1.51
SPARC-201ENST00000231061 IGLV5-39A0A0G2JS06 123 aa5.59□□□□□ -1.52
SPARC-201ENST00000231061 SLPIP03973 132 aa5.58□□□□□ -1.52
SPARC-201ENST00000231061 LOC101927531A0A1B0GV80 90 aa5.58□□□□□ -1.52
SPARC-201ENST00000231061 ERC2-IT1O76042 136 aa5.58□□□□□ -1.52
SPARC-201ENST00000231061 CUBNO60494 3623 aa5.58□□□□□ -1.52
SPARC-201ENST00000231061 FLNAP21333 2647 aaKnown RBP5.58□□□□□ -1.52
SPARC-201ENST00000231061 Q6ZR54 194 aa5.57□□□□□ -1.52
SPARC-201ENST00000231061 NOTCH1P46531 2555 aa5.56□□□□□ -1.52
SPARC-201ENST00000231061 LINC00158P58513 81 aa5.56□□□□□ -1.52
SPARC-201ENST00000231061 C16orf74Q96GX8 76 aa5.56□□□□□ -1.52
SPARC-201ENST00000231061 C8orf17Q9NRJ1 99 aa5.56□□□□□ -1.52
SPARC-201ENST00000231061 NBPF19A0A087WUL8 3843 aa5.55□□□□□ -1.52
SPARC-201ENST00000231061 A0A087WYN8 130 aa5.55□□□□□ -1.52
SPARC-201ENST00000231061 COX7B2Q8TF08 81 aa5.55□□□□□ -1.52
SPARC-201ENST00000231061 ORMDL1Q9P0S3 153 aa5.55□□□□□ -1.52
SPARC-201ENST00000231061 DEFB130BP0DP73 79 aa5.55□□□□□ -1.52
SPARC-201ENST00000231061 DEFB130AP0DP74 79 aa5.55□□□□□ -1.52
SPARC-201ENST00000231061 A8MWP4 228 aa5.54□□□□□ -1.52
SPARC-201ENST00000231061 LECT2O14960 151 aa5.54□□□□□ -1.52
SPARC-201ENST00000231061 KRTAP1-3Q8IUG1 177 aa5.54□□□□□ -1.52
SPARC-201ENST00000231061 SPINK7P58062 85 aa5.54□□□□□ -1.52
SPARC-201ENST00000231061 GIG44P09565 113 aaPredicted RBP5.53□□□□□ -1.52
SPARC-201ENST00000231061 LINC01006Q8NI28 216 aa5.53□□□□□ -1.52
SPARC-201ENST00000231061 IGLV4-60A0A075B6I1 120 aa5.53□□□□□ -1.52
SPARC-201ENST00000231061 NF1P21359 2839 aa5.53□□□□□ -1.52
SPARC-201ENST00000231061 P0C880 135 aa5.53□□□□□ -1.52
SPARC-201ENST00000231061 Q6ZQT0 140 aa5.53□□□□□ -1.52
SPARC-201ENST00000231061 TRBV6-4A0A1B0GX49 114 aa5.52□□□□□ -1.53
SPARC-201ENST00000231061 SPAG11BQ08648 103 aa5.52□□□□□ -1.53
SPARC-201ENST00000231061 SPAG11AQ6PDA7 123 aa5.52□□□□□ -1.53
SPARC-201ENST00000231061 OBSCN-AS1Q96MR7 158 aa5.52□□□□□ -1.53
SPARC-201ENST00000231061 CLPSL2Q6UWE3 100 aa5.52□□□□□ -1.53
SPARC-201ENST00000231061 A0A096LPF7 62 aa5.52□□□□□ -1.53
SPARC-201ENST00000231061 A0A1W2PNM2 257 aa5.51□□□□□ -1.53
SPARC-201ENST00000231061 NDUFAF8A1L188 74 aa5.5□□□□□ -1.53
SPARC-201ENST00000231061 Q8N9L7 120 aa5.5□□□□□ -1.53
SPARC-201ENST00000231061 LINC00208Q96KT6 92 aa5.5□□□□□ -1.53
SPARC-201ENST00000231061 APCP25054 2843 aa5.5□□□□□ -1.53
SPARC-201ENST00000231061 HIVEP1P15822 2718 aa5.5□□□□□ -1.53
SPARC-201ENST00000231061 AKAP9Q99996 3911 aa5.5□□□□□ -1.53
SPARC-201ENST00000231061 LY6G6DO95868 133 aa5.49□□□□□ -1.53
SPARC-201ENST00000231061 CCL18P55774 89 aa5.49□□□□□ -1.53
SPARC-201ENST00000231061 NOTCH2NLQ7Z3S9 236 aa5.49□□□□□ -1.53
SPARC-201ENST00000231061 OCR1Q9BZK8 76 aa5.49□□□□□ -1.53
SPARC-201ENST00000231061 ZNF469Q96JG9 3925 aaPredicted RBP5.49□□□□□ -1.53
SPARC-201ENST00000231061 SMIM11BQ8TCY0 68 aa5.49□□□□□ -1.53
SPARC-201ENST00000231061 IGKV2-28A0A075B6P5 120 aa5.48□□□□□ -1.53
SPARC-201ENST00000231061 IGKV2D-28P01615 120 aa5.48□□□□□ -1.53
SPARC-201ENST00000231061 DHRS4-AS1Q9P1J3 65 aa5.48□□□□□ -1.53
SPARC-201ENST00000231061 JMJD7-PLA2G4BH0Y9G9 81 aa5.48□□□□□ -1.53
SPARC-201ENST00000231061 CSNK1G2-AS1Q8NCQ2 148 aa5.48□□□□□ -1.53
SPARC-201ENST00000231061 LINC00959A0A1B0GUT2 108 aa5.48□□□□□ -1.53
SPARC-201ENST00000231061 SMR3AQ99954 134 aa5.46□□□□□ -1.53
SPARC-201ENST00000231061 DEFB4AO15263 64 aa5.46□□□□□ -1.54
SPARC-201ENST00000231061 IGLV10-54A0A075B6I4 117 aa5.45□□□□□ -1.54
SPARC-201ENST00000231061 H0YGX0 51 aa5.45□□□□□ -1.54
SPARC-201ENST00000231061 KRTAP1-1Q07627 177 aa5.45□□□□□ -1.54
SPARC-201ENST00000231061 M0R2N4 97 aa5.44□□□□□ -1.54
SPARC-201ENST00000231061 RTL8CO15255 209 aa5.44□□□□□ -1.54
SPARC-201ENST00000231061 Q8NDZ9 215 aa5.44□□□□□ -1.54
SPARC-201ENST00000231061 PRO0255Q9UI72 69 aa5.44□□□□□ -1.54
SPARC-201ENST00000231061 ANGP03950 147 aaKnown RBP5.43□□□□□ -1.54
SPARC-201ENST00000231061 HTN3P15516 51 aa5.43□□□□□ -1.54
SPARC-201ENST00000231061 DEFB135Q30KP9 77 aa5.43□□□□□ -1.54
SPARC-201ENST00000231061 ASB16-AS1Q495Z4 193 aa5.42□□□□□ -1.54
SPARC-201ENST00000231061 NBEAL2Q6ZNJ1 2754 aa5.42□□□□□ -1.54
SPARC-201ENST00000231061 IGHV4-28A0A0C4DH34 117 aa5.41□□□□□ -1.54
SPARC-201ENST00000231061 Q8IZM0 81 aa5.41□□□□□ -1.54
SPARC-201ENST00000231061 IGHV4-30-4P0DP06 118 aa5.41□□□□□ -1.54
SPARC-201ENST00000231061 K7ERS5 55 aa5.41□□□□□ -1.54
SPARC-201ENST00000231061 KRTAP10-3P60369 221 aa5.41□□□□□ -1.54
SPARC-201ENST00000231061 LINC00167Q96N53 147 aa5.4□□□□□ -1.54
SPARC-201ENST00000231061 C20orf166-AS1Q96NR2 134 aa5.4□□□□□ -1.54
SPARC-201ENST00000231061 A0A1B0GUV1 79 aa5.4□□□□□ -1.54
SPARC-201ENST00000231061 EGFEM1PQ0D2K5 195 aa5.39□□□□□ -1.55
SPARC-201ENST00000231061 LINC00612Q8N6U2 182 aa5.39□□□□□ -1.55
SPARC-201ENST00000231061 ANK3Q12955 4377 aaKnown RBP5.39□□□□□ -1.55
SPARC-201ENST00000231061 OTOGQ6ZRI0 2925 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms