RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 ATXN8Q156A1 80 aa8.49□□□□□ -1.05
VEGFA-201ENST00000230480 PHF5AQ7RTV0 110 aaKnown RBP8.49□□□□□ -1.05
VEGFA-201ENST00000230480 LEPROTO15243 131 aa8.48□□□□□ -1.05
VEGFA-201ENST00000230480 NDUFV3P56181 108 aaKnown RBP8.48□□□□□ -1.05
VEGFA-201ENST00000230480 PRR3P79522 188 aaKnown RBP8.48□□□□□ -1.05
VEGFA-201ENST00000230480 C6orf226Q5I0X4 101 aa8.48□□□□□ -1.05
VEGFA-201ENST00000230480 COX7B2Q8TF08 81 aa8.48□□□□□ -1.05
VEGFA-201ENST00000230480 FAM240AA0A1B0GVK7 77 aa8.47□□□□□ -1.05
VEGFA-201ENST00000230480 NDUFC2-KCTD14E9PQ53 114 aa8.47□□□□□ -1.05
VEGFA-201ENST00000230480 IFITM1P13164 125 aa8.47□□□□□ -1.05
VEGFA-201ENST00000230480 LGALS3P17931 250 aaKnown RBP8.47□□□□□ -1.05
VEGFA-201ENST00000230480 H3BT86 120 aa8.46□□□□□ -1.06
VEGFA-201ENST00000230480 J3QQQ9 107 aa8.46□□□□□ -1.06
VEGFA-201ENST00000230480 MT1HL1P0DM35 61 aa8.46□□□□□ -1.06
VEGFA-201ENST00000230480 SERTAD4-AS1Q5TG53 156 aa8.46□□□□□ -1.06
VEGFA-201ENST00000230480 SS18L2Q9UHA2 77 aa8.46□□□□□ -1.06
VEGFA-201ENST00000230480 TRBV10-2A0A0K0K1G8 114 aa8.45□□□□□ -1.06
VEGFA-201ENST00000230480 C9JAW5 83 aa8.45□□□□□ -1.06
VEGFA-201ENST00000230480 PKIGQ9Y2B9 76 aa8.45□□□□□ -1.06
VEGFA-201ENST00000230480 PRSS2P07478 247 aa8.44□□□□□ -1.06
VEGFA-201ENST00000230480 TMEM223A0PJW6 202 aa8.43□□□□□ -1.06
VEGFA-201ENST00000230480 XAGE1AQ9HD64 81 aa8.43□□□□□ -1.06
VEGFA-201ENST00000230480 PSORS1C2Q9UIG4 136 aa8.43□□□□□ -1.06
VEGFA-201ENST00000230480 HMCN2Q8NDA2 5059 aa8.43□□□□□ -1.06
VEGFA-201ENST00000230480 A4D1N5 150 aa8.42□□□□□ -1.06
VEGFA-201ENST00000230480 B5MCH6 92 aa8.42□□□□□ -1.06
VEGFA-201ENST00000230480 TSPEAR-AS2P59090 65 aa8.42□□□□□ -1.06
VEGFA-201ENST00000230480 FAM19A5Q7Z5A7 132 aaPredicted RBP8.42□□□□□ -1.06
VEGFA-201ENST00000230480 C7orf33Q8WU49 177 aa8.42□□□□□ -1.06
VEGFA-201ENST00000230480 ZNF625Q96I27 306 aaPredicted RBP8.42□□□□□ -1.06
VEGFA-201ENST00000230480 TMEM126AQ9H061 195 aa8.42□□□□□ -1.06
VEGFA-201ENST00000230480 CXCL5P42830 114 aa8.41□□□□□ -1.06
VEGFA-201ENST00000230480 TMEM170BQ5T4T1 132 aa8.41□□□□□ -1.06
VEGFA-201ENST00000230480 Q8NDZ9 215 aa8.41□□□□□ -1.06
VEGFA-201ENST00000230480 TRBV7-7A0A0K0K1E9 115 aa8.4□□□□□ -1.06
VEGFA-201ENST00000230480 SPANXCQ9NY87 97 aa8.4□□□□□ -1.06
VEGFA-201ENST00000230480 OXTP01178 125 aa8.39□□□□□ -1.07
VEGFA-201ENST00000230480 COX6CP09669 75 aa8.39□□□□□ -1.07
VEGFA-201ENST00000230480 SFTA2Q6UW10 78 aa8.39□□□□□ -1.07
VEGFA-201ENST00000230480 IMUPQ9GZP8 106 aa8.39□□□□□ -1.07
VEGFA-201ENST00000230480 ACYP1P07311 99 aa8.38□□□□□ -1.07
VEGFA-201ENST00000230480 Q1RN00 199 aa8.38□□□□□ -1.07
VEGFA-201ENST00000230480 C22orf24Q9Y442 160 aa8.38□□□□□ -1.07
VEGFA-201ENST00000230480 EIF4EBP3O60516 100 aaPredicted RBP8.37□□□□□ -1.07
VEGFA-201ENST00000230480 MUSTN1Q8IVN3 82 aa8.37□□□□□ -1.07
VEGFA-201ENST00000230480 CCDC179H3BU77 68 aa8.36□□□□□ -1.07
VEGFA-201ENST00000230480 TIMM17BO60830 172 aa8.36□□□□□ -1.07
VEGFA-201ENST00000230480 PLA2G2DQ9UNK4 145 aa8.36□□□□□ -1.07
VEGFA-201ENST00000230480 A0A0J9YXY3 114 aa8.35□□□□□ -1.07
VEGFA-201ENST00000230480 IGLV5-37A0A075B6J1 123 aa8.34□□□□□ -1.07
VEGFA-201ENST00000230480 LST1O00453 97 aa8.34□□□□□ -1.07
VEGFA-201ENST00000230480 TRIAP1O43715 76 aa8.34□□□□□ -1.07
VEGFA-201ENST00000230480 PFN2P35080 140 aa8.34□□□□□ -1.07
VEGFA-201ENST00000230480 C1orf137Q5JT78 98 aa8.34□□□□□ -1.07
VEGFA-201ENST00000230480 SPINK6Q6UWN8 80 aa8.34□□□□□ -1.07
VEGFA-201ENST00000230480 IGLV7-43P04211 117 aa8.33□□□□□ -1.08
VEGFA-201ENST00000230480 KRTAP10-8P60410 259 aa8.33□□□□□ -1.08
VEGFA-201ENST00000230480 SND1-IT1Q9HBX3 110 aa8.33□□□□□ -1.08
VEGFA-201ENST00000230480 VPREB1P12018 145 aa8.32□□□□□ -1.08
VEGFA-201ENST00000230480 LINC00167Q96N53 147 aa8.32□□□□□ -1.08
VEGFA-201ENST00000230480 LITAFQ99732 161 aa8.32□□□□□ -1.08
VEGFA-201ENST00000230480 TEX49A0A1B0GTD5 131 aa8.31□□□□□ -1.08
VEGFA-201ENST00000230480 HERV-K104P63124 156 aa8.31□□□□□ -1.08
VEGFA-201ENST00000230480 MEIG1Q5JSS6 88 aa8.31□□□□□ -1.08
VEGFA-201ENST00000230480 SMIM20Q8N5G0 67 aa8.31□□□□□ -1.08
VEGFA-201ENST00000230480 COPS9Q8WXC6 57 aa8.31□□□□□ -1.08
VEGFA-201ENST00000230480 PPDPFQ9H3Y8 114 aa8.31□□□□□ -1.08
VEGFA-201ENST00000230480 KRTAP1-4P0C5Y4 121 aa8.29□□□□□ -1.08
VEGFA-201ENST00000230480 COX17Q14061 63 aa8.29□□□□□ -1.08
VEGFA-201ENST00000230480 MRPL55Q7Z7F7 128 aaKnown RBP8.29□□□□□ -1.08
VEGFA-201ENST00000230480 A0A0U1RRA0 63 aa8.28□□□□□ -1.08
VEGFA-201ENST00000230480 H7C2G1 150 aa8.28□□□□□ -1.08
VEGFA-201ENST00000230480 LINC00643Q86TS7 51 aa8.28□□□□□ -1.08
VEGFA-201ENST00000230480 RPL37AP8A6NKH3 93 aa8.27□□□□□ -1.09
VEGFA-201ENST00000230480 KRTAP13-1Q8IUC0 172 aa8.27□□□□□ -1.09
VEGFA-201ENST00000230480 NDUFA12Q9UI09 145 aa8.27□□□□□ -1.09
VEGFA-201ENST00000230480 UBE2BP63146 152 aa8.26□□□□□ -1.09
VEGFA-201ENST00000230480 A0A1B0GX51 115 aa8.25□□□□□ -1.09
VEGFA-201ENST00000230480 H0Y9J4 135 aa8.25□□□□□ -1.09
VEGFA-201ENST00000230480 UQCRQO14949 82 aa8.25□□□□□ -1.09
VEGFA-201ENST00000230480 C3orf22Q8N5N4 141 aa8.25□□□□□ -1.09
VEGFA-201ENST00000230480 DAND5Q8N907 189 aa8.25□□□□□ -1.09
VEGFA-201ENST00000230480 IGLV1-50A0A075B6I6 118 aa8.24□□□□□ -1.09
VEGFA-201ENST00000230480 TRACP01848 142 aa8.24□□□□□ -1.09
VEGFA-201ENST00000230480 LINC00158P58513 81 aa8.24□□□□□ -1.09
VEGFA-201ENST00000230480 MIR7-3HGQ8N6C7 128 aa8.24□□□□□ -1.09
VEGFA-201ENST00000230480 ZNF861PO60384 105 aa8.23□□□□□ -1.09
VEGFA-201ENST00000230480 ADAMTSL4-AS1Q5T5F5 129 aa8.23□□□□□ -1.09
VEGFA-201ENST00000230480 SOSTDC1Q6X4U4 206 aa8.22□□□□□ -1.09
VEGFA-201ENST00000230480 FAM236AA0A1B0GUQ0 79 aa8.21□□□□□ -1.1
VEGFA-201ENST00000230480 FAM236BA0A1B0GV22 79 aa8.21□□□□□ -1.1
VEGFA-201ENST00000230480 BCE1O60756 84 aa8.21□□□□□ -1.1
VEGFA-201ENST00000230480 C9orf153Q5TBE3 101 aa8.21□□□□□ -1.1
VEGFA-201ENST00000230480 CLEC2BQ92478 149 aa8.21□□□□□ -1.1
VEGFA-201ENST00000230480 IGKV2-28A0A075B6P5 120 aa8.2□□□□□ -1.1
VEGFA-201ENST00000230480 M0R378 163 aa8.2□□□□□ -1.1
VEGFA-201ENST00000230480 IGKV2D-28P01615 120 aa8.2□□□□□ -1.1
VEGFA-201ENST00000230480 REG3GQ6UW15 175 aa8.2□□□□□ -1.1
VEGFA-201ENST00000230480 PRR26Q8N8Z3 221 aa8.2□□□□□ -1.1
VEGFA-201ENST00000230480 DIRC1Q969H9 104 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms