RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 TRAV13-2A0A0B4J235 113 aa12.42□□□□□ -0.42
RHBDD3-201ENST00000216085 A4D1N5 150 aa12.42□□□□□ -0.42
RHBDD3-201ENST00000216085 TRAV23DV6A0A075B6W5 121 aa12.41□□□□□ -0.42
RHBDD3-201ENST00000216085 TMEM238LA0A1B0GVL6 79 aa12.41□□□□□ -0.42
RHBDD3-201ENST00000216085 A6NJY4 79 aa12.41□□□□□ -0.42
RHBDD3-201ENST00000216085 UBE2AP49459 152 aa12.41□□□□□ -0.42
RHBDD3-201ENST00000216085 FXYD2P54710 66 aa12.41□□□□□ -0.42
RHBDD3-201ENST00000216085 RPL28P46779 137 aaKnown RBP12.4□□□□□ -0.42
RHBDD3-201ENST00000216085 LINC00337Q8N6G1 96 aa12.4□□□□□ -0.42
RHBDD3-201ENST00000216085 TAX1BP3O14907 124 aa12.38□□□□□ -0.43
RHBDD3-201ENST00000216085 FAM19A1Q7Z5A9 133 aa12.38□□□□□ -0.43
RHBDD3-201ENST00000216085 ETDCA0A1B0GVM5 59 aa12.38□□□□□ -0.43
RHBDD3-201ENST00000216085 INAFM2P0DMQ5 153 aa12.38□□□□□ -0.43
RHBDD3-201ENST00000216085 SPINK6Q6UWN8 80 aa12.38□□□□□ -0.43
RHBDD3-201ENST00000216085 KRTAP4-5Q9BYR2 181 aa12.38□□□□□ -0.43
RHBDD3-201ENST00000216085 ZNF861PO60384 105 aa12.36□□□□□ -0.43
RHBDD3-201ENST00000216085 ZNF73O43830 326 aaPredicted RBP12.35□□□□□ -0.43
RHBDD3-201ENST00000216085 SPRR1AP35321 89 aa12.35□□□□□ -0.43
RHBDD3-201ENST00000216085 DIRC1Q969H9 104 aa12.35□□□□□ -0.43
RHBDD3-201ENST00000216085 NHP2Q9NX24 153 aaKnown RBP12.35□□□□□ -0.43
RHBDD3-201ENST00000216085 RAB37Q96AX2 223 aa12.33□□□□□ -0.44
RHBDD3-201ENST00000216085 PRLHP81277 87 aa12.32□□□□□ -0.44
RHBDD3-201ENST00000216085 H0Y9J4 135 aa12.31□□□□□ -0.44
RHBDD3-201ENST00000216085 A0A1B0GWB2 263 aa12.3□□□□□ -0.44
RHBDD3-201ENST00000216085 C9orf118A6NHY6 69 aa12.3□□□□□ -0.44
RHBDD3-201ENST00000216085 PCP4P48539 62 aa12.3□□□□□ -0.44
RHBDD3-201ENST00000216085 A0A0B4J2C4 111 aa12.3□□□□□ -0.44
RHBDD3-201ENST00000216085 KRTAP4-16G5E9R7 235 aaPredicted RBP12.29□□□□□ -0.44
RHBDD3-201ENST00000216085 RPL13AP40429 203 aaKnown RBP12.29□□□□□ -0.44
RHBDD3-201ENST00000216085 KRTAP13-1Q8IUC0 172 aa12.29□□□□□ -0.44
RHBDD3-201ENST00000216085 CFC1BP0CG36 223 aa12.28□□□□□ -0.44
RHBDD3-201ENST00000216085 CFC1P0CG37 223 aa12.28□□□□□ -0.44
RHBDD3-201ENST00000216085 B5MCH6 92 aa12.27□□□□□ -0.45
RHBDD3-201ENST00000216085 K7ERJ3 54 aa12.27□□□□□ -0.45
RHBDD3-201ENST00000216085 C6orf99Q4VX62 202 aa12.27□□□□□ -0.45
RHBDD3-201ENST00000216085 Q6ZRX8 168 aa12.27□□□□□ -0.45
RHBDD3-201ENST00000216085 HIGD2AQ9BW72 106 aa12.27□□□□□ -0.45
RHBDD3-201ENST00000216085 ABCA13Q86UQ4 5058 aa12.26□□□□□ -0.45
RHBDD3-201ENST00000216085 VAMP3Q15836 100 aa12.25□□□□□ -0.45
RHBDD3-201ENST00000216085 TRBV7-6A0A0J9YX20 115 aa12.25□□□□□ -0.45
RHBDD3-201ENST00000216085 H3BUT2 72 aa12.25□□□□□ -0.45
RHBDD3-201ENST00000216085 SMIM11BQ8TCY0 68 aa12.25□□□□□ -0.45
RHBDD3-201ENST00000216085 COX7BP24311 80 aa12.24□□□□□ -0.45
RHBDD3-201ENST00000216085 PKHD1L1Q86WI1 4243 aa12.24□□□□□ -0.45
RHBDD3-201ENST00000216085 PRO1854Q9UHT4 67 aa12.23□□□□□ -0.45
RHBDD3-201ENST00000216085 FLG2Q5D862 2391 aaPredicted RBP12.23□□□□□ -0.45
RHBDD3-201ENST00000216085 H7C2G1 150 aa12.22□□□□□ -0.45
RHBDD3-201ENST00000216085 ELOF1P60002 83 aaKnown RBP12.22□□□□□ -0.45
RHBDD3-201ENST00000216085 Q1RN00 199 aa12.22□□□□□ -0.45
RHBDD3-201ENST00000216085 A0A1W2PPM0 123 aa12.21□□□□□ -0.45
RHBDD3-201ENST00000216085 UBE2V1Q13404 147 aa12.2□□□□□ -0.46
RHBDD3-201ENST00000216085 C21orf62-AS1Q17RA5 79 aa12.2□□□□□ -0.46
RHBDD3-201ENST00000216085 DHRS4-AS1Q9P1J3 65 aa12.2□□□□□ -0.46
RHBDD3-201ENST00000216085 ZNF706Q9Y5V0 76 aaPredicted RBP12.2□□□□□ -0.46
RHBDD3-201ENST00000216085 FABP2P12104 132 aa12.19□□□□□ -0.46
RHBDD3-201ENST00000216085 SMCR5Q8TEV8 140 aa12.18□□□□□ -0.46
RHBDD3-201ENST00000216085 NAA38Q9BRA0 125 aaKnown RBP12.18□□□□□ -0.46
RHBDD3-201ENST00000216085 GTF2H5Q6ZYL4 71 aa12.18□□□□□ -0.46
RHBDD3-201ENST00000216085 OXTP01178 125 aa12.17□□□□□ -0.46
RHBDD3-201ENST00000216085 Q9BRP9 147 aa12.17□□□□□ -0.46
RHBDD3-201ENST00000216085 MYCBP2O75592 4640 aa12.15□□□□□ -0.46
RHBDD3-201ENST00000216085 SLC25A20O43772 301 aa12.15□□□□□ -0.46
RHBDD3-201ENST00000216085 K7EP34 96 aa12.14□□□□□ -0.47
RHBDD3-201ENST00000216085 SPCS1Q9Y6A9 102 aa12.14□□□□□ -0.47
RHBDD3-201ENST00000216085 TSPAN13O95857 204 aa12.13□□□□□ -0.47
RHBDD3-201ENST00000216085 KRTAP29-1A8MX34 341 aaPredicted RBP12.11□□□□□ -0.47
RHBDD3-201ENST00000216085 LYRM7Q5U5X0 104 aa12.11□□□□□ -0.47
RHBDD3-201ENST00000216085 LINC01600Q96MT4 127 aa12.11□□□□□ -0.47
RHBDD3-201ENST00000216085 SPRR4Q96PI1 79 aa12.1□□□□□ -0.47
RHBDD3-201ENST00000216085 PCLOQ9Y6V0 5065 aa12.1□□□□□ -0.47
RHBDD3-201ENST00000216085 H0YGX0 51 aa12.1□□□□□ -0.47
RHBDD3-201ENST00000216085 ERC2-IT1O76042 136 aa12.1□□□□□ -0.47
RHBDD3-201ENST00000216085 SNCGO76070 127 aa12.1□□□□□ -0.47
RHBDD3-201ENST00000216085 KRTAP1-4P0C5Y4 121 aa12.1□□□□□ -0.47
RHBDD3-201ENST00000216085 PSMB2P49721 201 aa12.1□□□□□ -0.47
RHBDD3-201ENST00000216085 COX6CP09669 75 aa12.08□□□□□ -0.48
RHBDD3-201ENST00000216085 FAM229BQ4G0N7 80 aa12.08□□□□□ -0.48
RHBDD3-201ENST00000216085 J3QL48 77 aa12.07□□□□□ -0.48
RHBDD3-201ENST00000216085 CRYGAP11844 174 aa12.07□□□□□ -0.48
RHBDD3-201ENST00000216085 LINC00575Q6W349 94 aa12.07□□□□□ -0.48
RHBDD3-201ENST00000216085 GAGE2AQ6NT46 116 aa12.06□□□□□ -0.48
RHBDD3-201ENST00000216085 hADV29S1A0JD25 119 aa12.05□□□□□ -0.48
RHBDD3-201ENST00000216085 FAT3Q8TDW7 4589 aa12.05□□□□□ -0.48
RHBDD3-201ENST00000216085 LRP1Q07954 4544 aaKnown RBP12.05□□□□□ -0.48
RHBDD3-201ENST00000216085 TRIAP1O43715 76 aa12.05□□□□□ -0.48
RHBDD3-201ENST00000216085 LINC00483Q53H64 154 aa12.02□□□□□ -0.48
RHBDD3-201ENST00000216085 PRR26Q8N8Z3 221 aa12.02□□□□□ -0.48
RHBDD3-201ENST00000216085 TRBV20-1A0A075B6N2 111 aa12.02□□□□□ -0.49
RHBDD3-201ENST00000216085 SCGB1C2P0DMR2 95 aa12.02□□□□□ -0.49
RHBDD3-201ENST00000216085 ST20-AS1Q8NBB2 130 aa12.02□□□□□ -0.49
RHBDD3-201ENST00000216085 ANAPC11Q9NYG5 84 aa12.02□□□□□ -0.49
RHBDD3-201ENST00000216085 DMBT1Q9UGM3 2413 aaPredicted RBP12.01□□□□□ -0.49
RHBDD3-201ENST00000216085 A0A1B0GX51 115 aa11.99□□□□□ -0.49
RHBDD3-201ENST00000216085 A0A087X002 238 aa11.98□□□□□ -0.49
RHBDD3-201ENST00000216085 TEX49A0A1B0GTD5 131 aa11.98□□□□□ -0.49
RHBDD3-201ENST00000216085 DEFB105AQ8NG35 78 aa11.98□□□□□ -0.49
RHBDD3-201ENST00000216085 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.97□□□□□ -0.49
RHBDD3-201ENST00000216085 H3BMG7 143 aa11.97□□□□□ -0.49
RHBDD3-201ENST00000216085 OCIAD2Q56VL3 154 aa11.97□□□□□ -0.49
RHBDD3-201ENST00000216085 Q6ZQY7 126 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms