RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 SMIM26A0A096LP01 95 aa7.56□□□□□ -1.2
ACTN1-201ENST00000193403 FUSP35637 526 aaKnown RBP eCLIP7.56□□□□□ -1.2
ACTN1-201ENST00000193403 LINC00336Q6ZUF6 198 aa7.56□□□□□ -1.2
ACTN1-201ENST00000193403 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.56□□□□□ -1.2
ACTN1-201ENST00000193403 HIGD2AQ9BW72 106 aa7.56□□□□□ -1.2
ACTN1-201ENST00000193403 LELP1Q5T871 98 aa7.55□□□□□ -1.2
ACTN1-201ENST00000193403 Q6ZTC4 211 aa7.55□□□□□ -1.2
ACTN1-201ENST00000193403 Q5XG85 94 aa7.55□□□□□ -1.2
ACTN1-201ENST00000193403 DEFB131BA0A096LNP1 70 aa7.55□□□□□ -1.2
ACTN1-201ENST00000193403 Q6ZRU5 148 aa7.54□□□□□ -1.2
ACTN1-201ENST00000193403 KRTAP1-1Q07627 177 aa7.54□□□□□ -1.2
ACTN1-201ENST00000193403 LINC00167Q96N53 147 aa7.54□□□□□ -1.2
ACTN1-201ENST00000193403 LOC110117498A0A087WWA1 95 aa7.53□□□□□ -1.2
ACTN1-201ENST00000193403 DEFB116Q30KQ4 102 aa7.52□□□□□ -1.21
ACTN1-201ENST00000193403 CXCL6P80162 114 aa7.52□□□□□ -1.21
ACTN1-201ENST00000193403 C11orf45Q8TAV5 145 aa7.52□□□□□ -1.21
ACTN1-201ENST00000193403 M0R378 163 aa7.51□□□□□ -1.21
ACTN1-201ENST00000193403 IGLV6-57P01721 117 aa7.51□□□□□ -1.21
ACTN1-201ENST00000193403 PRYO14603 147 aa7.5□□□□□ -1.21
ACTN1-201ENST00000193403 A0A0J9YWU9 116 aa7.5□□□□□ -1.21
ACTN1-201ENST00000193403 SYCNQ0VAF6 134 aa7.5□□□□□ -1.21
ACTN1-201ENST00000193403 NDUFC1O43677 76 aa7.49□□□□□ -1.21
ACTN1-201ENST00000193403 TRRAPQ9Y4A5 3859 aa7.49□□□□□ -1.21
ACTN1-201ENST00000193403 H3BQ85 93 aa7.49□□□□□ -1.21
ACTN1-201ENST00000193403 KLKP1Q107X0 134 aa7.48□□□□□ -1.21
ACTN1-201ENST00000193403 LYPD5Q6UWN5 251 aa7.48□□□□□ -1.21
ACTN1-201ENST00000193403 PRO0628Q9UI54 55 aa7.48□□□□□ -1.21
ACTN1-201ENST00000193403 SMIM29Q86T20 159 aa7.48□□□□□ -1.21
ACTN1-201ENST00000193403 ELOF1P60002 83 aaKnown RBP7.47□□□□□ -1.21
ACTN1-201ENST00000193403 WFDC13Q8IUB5 93 aa7.47□□□□□ -1.21
ACTN1-201ENST00000193403 EGFEM1PQ0D2K5 195 aa7.45□□□□□ -1.22
ACTN1-201ENST00000193403 VPREB1P12018 145 aa7.45□□□□□ -1.22
ACTN1-201ENST00000193403 TRBV7-4A0A0J9YYF1 115 aa7.44□□□□□ -1.22
ACTN1-201ENST00000193403 PSPHP1O15172 72 aa7.44□□□□□ -1.22
ACTN1-201ENST00000193403 C1orf137Q5JT78 98 aa7.44□□□□□ -1.22
ACTN1-201ENST00000193403 C16orf95Q9H693 158 aa7.44□□□□□ -1.22
ACTN1-201ENST00000193403 PKD1L1Q8TDX9 2849 aa7.44□□□□□ -1.22
ACTN1-201ENST00000193403 KRTAP10-3P60369 221 aa7.44□□□□□ -1.22
ACTN1-201ENST00000193403 LINC00612Q8N6U2 182 aa7.43□□□□□ -1.22
ACTN1-201ENST00000193403 A0A0G2JQZ4 141 aa7.43□□□□□ -1.22
ACTN1-201ENST00000193403 A0A1W2PNN7 141 aa7.43□□□□□ -1.22
ACTN1-201ENST00000193403 Q6ZRP5 223 aa7.43□□□□□ -1.22
ACTN1-201ENST00000193403 FP248Q71RG6 208 aaPredicted RBP7.43□□□□□ -1.22
ACTN1-201ENST00000193403 ST20-AS1Q8NBB2 130 aa7.42□□□□□ -1.22
ACTN1-201ENST00000193403 NDUFS5O43920 106 aa7.42□□□□□ -1.22
ACTN1-201ENST00000193403 ATP5EP56381 51 aaPredicted RBP7.42□□□□□ -1.22
ACTN1-201ENST00000193403 ESRGQ1W209 222 aa7.42□□□□□ -1.22
ACTN1-201ENST00000193403 KRTAP24-1Q3LI83 254 aa7.42□□□□□ -1.22
ACTN1-201ENST00000193403 C1orf195Q5TG92 126 aa7.42□□□□□ -1.22
ACTN1-201ENST00000193403 Q8NAQ8 132 aa7.42□□□□□ -1.22
ACTN1-201ENST00000193403 C7orf33Q8WU49 177 aa7.42□□□□□ -1.22
ACTN1-201ENST00000193403 IGKV4-1P06312 121 aa7.41□□□□□ -1.22
ACTN1-201ENST00000193403 BCE1O60756 84 aa7.41□□□□□ -1.22
ACTN1-201ENST00000193403 FAM229BQ4G0N7 80 aa7.4□□□□□ -1.22
ACTN1-201ENST00000193403 LINC00528Q8N1L1 170 aa7.4□□□□□ -1.22
ACTN1-201ENST00000193403 H0Y9J4 135 aa7.39□□□□□ -1.23
ACTN1-201ENST00000193403 SERTAD4-AS1Q5TG53 156 aa7.39□□□□□ -1.23
ACTN1-201ENST00000193403 FAM168BA1KXE4 195 aa7.39□□□□□ -1.23
ACTN1-201ENST00000193403 PRR34Q9NV39 138 aa7.38□□□□□ -1.23
ACTN1-201ENST00000193403 UBE2AP49459 152 aa7.37□□□□□ -1.23
ACTN1-201ENST00000193403 PRLHP81277 87 aa7.37□□□□□ -1.23
ACTN1-201ENST00000193403 WIPF1O43516 503 aa7.37□□□□□ -1.23
ACTN1-201ENST00000193403 MP68P56378 58 aa7.36□□□□□ -1.23
ACTN1-201ENST00000193403 GVQW2A0A096LPI5 108 aaPredicted RBP7.36□□□□□ -1.23
ACTN1-201ENST00000193403 Q8N377 158 aa7.36□□□□□ -1.23
ACTN1-201ENST00000193403 AKAP9Q99996 3911 aa7.36□□□□□ -1.23
ACTN1-201ENST00000193403 C15orf56Q8N910 161 aa7.36□□□□□ -1.23
ACTN1-201ENST00000193403 V9GYY9 64 aa7.36□□□□□ -1.23
ACTN1-201ENST00000193403 K7EQZ3 153 aa7.35□□□□□ -1.23
ACTN1-201ENST00000193403 LINC00208Q96KT6 92 aa7.35□□□□□ -1.23
ACTN1-201ENST00000193403 DHRS4-AS1Q9P1J3 65 aa7.35□□□□□ -1.23
ACTN1-201ENST00000193403 A0A087WSZ3 146 aa7.34□□□□□ -1.24
ACTN1-201ENST00000193403 CDK2AP2O75956 126 aa7.33□□□□□ -1.24
ACTN1-201ENST00000193403 OCR1Q9BZK8 76 aa7.33□□□□□ -1.24
ACTN1-201ENST00000193403 SPTSSBQ8NFR3 76 aa7.32□□□□□ -1.24
ACTN1-201ENST00000193403 A0A1W2PNM2 257 aa7.32□□□□□ -1.24
ACTN1-201ENST00000193403 STAB2Q8WWQ8 2551 aa7.31□□□□□ -1.24
ACTN1-201ENST00000193403 LCE2DQ5TA82 110 aaPredicted RBP7.31□□□□□ -1.24
ACTN1-201ENST00000193403 ANK3Q12955 4377 aaKnown RBP7.31□□□□□ -1.24
ACTN1-201ENST00000193403 EPM2AB3EWF7 344 aa7.31□□□□□ -1.24
ACTN1-201ENST00000193403 RPL37AP61513 92 aaKnown RBP7.31□□□□□ -1.24
ACTN1-201ENST00000193403 Q6ZRX8 168 aa7.3□□□□□ -1.24
ACTN1-201ENST00000193403 Q8NBF4 154 aa7.3□□□□□ -1.24
ACTN1-201ENST00000193403 IGLV9-49A0A0B4J1Y8 123 aa7.3□□□□□ -1.24
ACTN1-201ENST00000193403 ERC2-IT1O76042 136 aa7.3□□□□□ -1.24
ACTN1-201ENST00000193403 HCG22E2RYF7 251 aa7.29□□□□□ -1.24
ACTN1-201ENST00000193403 SPINK6Q6UWN8 80 aa7.29□□□□□ -1.24
ACTN1-201ENST00000193403 C1orf64Q8NEQ6 169 aa7.29□□□□□ -1.24
ACTN1-201ENST00000193403 MDFIQ99750 246 aa7.29□□□□□ -1.24
ACTN1-201ENST00000193403 MRPL55Q7Z7F7 128 aaKnown RBP7.28□□□□□ -1.24
ACTN1-201ENST00000193403 CASC10Q5T4H9 136 aa7.28□□□□□ -1.24
ACTN1-201ENST00000193403 LINC00476Q8WZB0 136 aa7.27□□□□□ -1.25
ACTN1-201ENST00000193403 KCNQ1DNQ9H478 68 aa7.26□□□□□ -1.25
ACTN1-201ENST00000193403 CHKB-CPT1BH3BT56 60 aa7.26□□□□□ -1.25
ACTN1-201ENST00000193403 CHTF8P0CG12 524 aa7.26□□□□□ -1.25
ACTN1-201ENST00000193403 Q9BRP9 147 aa7.26□□□□□ -1.25
ACTN1-201ENST00000193403 REG3GQ6UW15 175 aa7.25□□□□□ -1.25
ACTN1-201ENST00000193403 TENM3Q9P273 2699 aa7.25□□□□□ -1.25
ACTN1-201ENST00000193403 A8MUN3 132 aa7.24□□□□□ -1.25
ACTN1-201ENST00000193403 LINC01556Q5JQF7 62 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms